RNA–Protein interactions for RNA: ENST00000559888.1

AP3B2-212, Transcript of adaptor related protein complex 3 subunit beta 2, humanhuman

TSL 2

Gene AP3B2, Length 456 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B2-212ENST00000559888 MRC1P22897 1456 aa20.53■□□□□ 0.88
AP3B2-212ENST00000559888 ARFGEF1Q9Y6D6 1849 aa20.53■□□□□ 0.88
AP3B2-212ENST00000559888 NFIXQ14938 502 aa20.52■□□□□ 0.88
AP3B2-212ENST00000559888 IFFO2Q5TF58 517 aa20.51■□□□□ 0.87
AP3B2-212ENST00000559888 COL15A1P39059 1388 aa20.5■□□□□ 0.87
AP3B2-212ENST00000559888 KCPQ6ZWJ8 1503 aa20.5■□□□□ 0.87
AP3B2-212ENST00000559888 APLP1P51693 650 aa20.5■□□□□ 0.87
AP3B2-212ENST00000559888 BCL2L12Q9HB09 334 aa20.5■□□□□ 0.87
AP3B2-212ENST00000559888 VIRMAQ69YN4 1812 aaKnown RBP20.49■□□□□ 0.87
AP3B2-212ENST00000559888 CANXP27824 592 aaKnown RBP20.49■□□□□ 0.87
AP3B2-212ENST00000559888 TTC5Q8N0Z6 440 aa20.49■□□□□ 0.87
AP3B2-212ENST00000559888 RNF181Q9P0P0 153 aa20.49■□□□□ 0.87
AP3B2-212ENST00000559888 SERPINB2P05120 415 aa20.48■□□□□ 0.87
AP3B2-212ENST00000559888 CNGB1Q14028 1251 aaPredicted RBP20.48■□□□□ 0.87
AP3B2-212ENST00000559888 U2SURPO15042 1029 aaKnown RBP20.47■□□□□ 0.87
AP3B2-212ENST00000559888 STARD3NLO95772 234 aa20.47■□□□□ 0.87
AP3B2-212ENST00000559888 IL17REQ8NFR9 667 aa20.47■□□□□ 0.87
AP3B2-212ENST00000559888 NPC1L1Q9UHC9 1359 aa20.46■□□□□ 0.87
AP3B2-212ENST00000559888 EIF5P55010 431 aaKnown RBP20.46■□□□□ 0.87
AP3B2-212ENST00000559888 RBM46Q8TBY0 533 aaKnown RBP20.46■□□□□ 0.87
AP3B2-212ENST00000559888 KDM2BQ8NHM5 1336 aa20.46■□□□□ 0.87
AP3B2-212ENST00000559888 GNAT3A8MTJ3 354 aa20.45■□□□□ 0.86
AP3B2-212ENST00000559888 TEFQ10587 303 aa20.45■□□□□ 0.86
AP3B2-212ENST00000559888 C16orf71Q8IYS4 520 aaPredicted RBP20.45■□□□□ 0.86
AP3B2-212ENST00000559888 GAS2L2Q8NHY3 880 aa20.45■□□□□ 0.86
AP3B2-212ENST00000559888 ZNF496Q96IT1 587 aaPredicted RBP20.45■□□□□ 0.86
AP3B2-212ENST00000559888 AFDNP55196 1824 aaKnown RBP20.44■□□□□ 0.86
AP3B2-212ENST00000559888 A0A087WZG4 1122 aa20.44■□□□□ 0.86
AP3B2-212ENST00000559888 ZNF790Q6PG37 636 aa20.44■□□□□ 0.86
AP3B2-212ENST00000559888 BICDL1Q6ZP65 573 aa20.44■□□□□ 0.86
AP3B2-212ENST00000559888 DNAJC5GQ8N7S2 189 aa20.44■□□□□ 0.86
AP3B2-212ENST00000559888 TTLL6Q8N841 843 aa20.43■□□□□ 0.86
AP3B2-212ENST00000559888 TEX13AQ9BXU3 409 aaPredicted RBP20.43■□□□□ 0.86
AP3B2-212ENST00000559888 RRAGCQ9HB90 399 aa20.43■□□□□ 0.86
AP3B2-212ENST00000559888 SBF1O95248 1867 aa20.43■□□□□ 0.86
AP3B2-212ENST00000559888 COL3A1P02461 1466 aaPredicted RBP20.43■□□□□ 0.86
AP3B2-212ENST00000559888 UBR2Q8IWV8 1755 aa20.42■□□□□ 0.86
AP3B2-212ENST00000559888 C2CD5Q86YS7 1000 aa20.42■□□□□ 0.86
AP3B2-212ENST00000559888 NRXN2Q9P2S2 1712 aa20.41■□□□□ 0.86
AP3B2-212ENST00000559888 H0YIN7 160 aa20.41■□□□□ 0.86
AP3B2-212ENST00000559888 RASSF7Q02833 373 aa20.41■□□□□ 0.86
AP3B2-212ENST00000559888 HEG1Q9ULI3 1381 aa20.41■□□□□ 0.86
AP3B2-212ENST00000559888 FSTL1Q12841 308 aa20.4■□□□□ 0.86
AP3B2-212ENST00000559888 TBC1D9BQ66K14 1250 aa20.4■□□□□ 0.86
AP3B2-212ENST00000559888 LMNB1P20700 586 aa20.39■□□□□ 0.85
AP3B2-212ENST00000559888 PHACTR3Q96KR7 559 aa20.39■□□□□ 0.85
AP3B2-212ENST00000559888 FMNL2Q96PY5 1086 aa20.39■□□□□ 0.85
AP3B2-212ENST00000559888 TBC1D2BQ9UPU7 963 aa20.39■□□□□ 0.85
AP3B2-212ENST00000559888 ZNF330Q9Y3S2 320 aaPredicted RBP20.39■□□□□ 0.85
AP3B2-212ENST00000559888 CARMIL3Q8ND23 1372 aa20.38■□□□□ 0.85
AP3B2-212ENST00000559888 IL6STP40189 918 aaPredicted RBP20.38■□□□□ 0.85
AP3B2-212ENST00000559888 ZC3H4Q9UPT8 1303 aaKnown RBP20.37■□□□□ 0.85
AP3B2-212ENST00000559888 A1BGP04217 495 aa20.37■□□□□ 0.85
AP3B2-212ENST00000559888 PRKAR2BP31323 418 aa20.37■□□□□ 0.85
AP3B2-212ENST00000559888 PRELPP51888 382 aa20.37■□□□□ 0.85
AP3B2-212ENST00000559888 CFAP53Q96M91 514 aa20.37■□□□□ 0.85
AP3B2-212ENST00000559888 CEMIPQ8WUJ3 1361 aa20.36■□□□□ 0.85
AP3B2-212ENST00000559888 BTBD11A6QL63 1104 aa20.36■□□□□ 0.85
AP3B2-212ENST00000559888 KCNQ3O43525 872 aa20.36■□□□□ 0.85
AP3B2-212ENST00000559888 NPM2Q86SE8 214 aaKnown RBP20.36■□□□□ 0.85
AP3B2-212ENST00000559888 BRIP1Q9BX63 1249 aa20.36■□□□□ 0.85
AP3B2-212ENST00000559888 GLTPD2A6NH11 291 aa20.35■□□□□ 0.85
AP3B2-212ENST00000559888 PDE6BP35913 854 aa20.35■□□□□ 0.85
AP3B2-212ENST00000559888 HTRA3P83110 453 aa20.35■□□□□ 0.85
AP3B2-212ENST00000559888 CCDC24Q8N4L8 307 aa20.35■□□□□ 0.85
AP3B2-212ENST00000559888 ZNF622Q969S3 477 aaKnown RBP eCLIP20.35■□□□□ 0.85
AP3B2-212ENST00000559888 RSPH6AQ9H0K4 717 aa20.35■□□□□ 0.85
AP3B2-212ENST00000559888 PDZRN3Q9UPQ7 1066 aa20.35■□□□□ 0.85
AP3B2-212ENST00000559888 SIPA1L3O60292 1781 aaPredicted RBP20.34■□□□□ 0.85
AP3B2-212ENST00000559888 DLEC1Q9Y238 1755 aa20.34■□□□□ 0.85
AP3B2-212ENST00000559888 PRR5LQ6MZQ0 368 aa20.34■□□□□ 0.85
AP3B2-212ENST00000559888 NUDCQ9Y266 331 aa20.34■□□□□ 0.85
AP3B2-212ENST00000559888 NFKBIEO00221 500 aa20.33■□□□□ 0.85
AP3B2-212ENST00000559888 VEGFAP15692 232 aaPredicted RBP20.33■□□□□ 0.85
AP3B2-212ENST00000559888 SMC1BQ8NDV3 1235 aa20.33■□□□□ 0.85
AP3B2-212ENST00000559888 SETDB2Q96T68 719 aa20.33■□□□□ 0.85
AP3B2-212ENST00000559888 USP16Q9Y5T5 823 aa20.33■□□□□ 0.85
AP3B2-212ENST00000559888 TNRC6CQ9HCJ0 1690 aaKnown RBP20.32■□□□□ 0.84
AP3B2-212ENST00000559888 CAMTA2O94983 1202 aa20.32■□□□□ 0.84
AP3B2-212ENST00000559888 WDR90Q96KV7 1748 aa20.32■□□□□ 0.84
AP3B2-212ENST00000559888 C21orf2O43822 256 aa20.31■□□□□ 0.84
AP3B2-212ENST00000559888 U2AF1L5P0DN76 240 aaPredicted RBP20.31■□□□□ 0.84
AP3B2-212ENST00000559888 U2AF1Q01081 240 aaKnown RBP eCLIP20.31■□□□□ 0.84
AP3B2-212ENST00000559888 KLRG1Q96E93 195 aa20.31■□□□□ 0.84
AP3B2-212ENST00000559888 ZNF219Q9P2Y4 722 aaPredicted RBP20.31■□□□□ 0.84
AP3B2-212ENST00000559888 CCDC88AQ3V6T2 1871 aa20.3■□□□□ 0.84
AP3B2-212ENST00000559888 DZIP3Q86Y13 1208 aaKnown RBP20.3■□□□□ 0.84
AP3B2-212ENST00000559888 CNBD1Q8NA66 436 aa20.3■□□□□ 0.84
AP3B2-212ENST00000559888 ANKRD31Q8N7Z5 1873 aa20.3■□□□□ 0.84
AP3B2-212ENST00000559888 NPHP1O15259 732 aa20.29■□□□□ 0.84
AP3B2-212ENST00000559888 PPP2R1AP30153 589 aa20.29■□□□□ 0.84
AP3B2-212ENST00000559888 PIP4K2AP48426 406 aaPredicted RBP20.29■□□□□ 0.84
AP3B2-212ENST00000559888 DPY19L2Q6NUT2 758 aa20.29■□□□□ 0.84
AP3B2-212ENST00000559888 MCM10Q7L590 875 aa20.29■□□□□ 0.84
AP3B2-212ENST00000559888 RTF1Q92541 710 aaKnown RBP20.29■□□□□ 0.84
AP3B2-212ENST00000559888 SCN7AQ01118 1682 aa20.29■□□□□ 0.84
AP3B2-212ENST00000559888 PRAMEF22A3QJZ6 481 aa20.28■□□□□ 0.84
AP3B2-212ENST00000559888 SNRPA1P09661 255 aaKnown RBP20.28■□□□□ 0.84
AP3B2-212ENST00000559888 JMYQ8N9B5 988 aa20.28■□□□□ 0.84
AP3B2-212ENST00000559888 CNKSR1Q969H4 720 aa20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms