RNA–Protein interactions for RNA: ENST00000559866.1

AC243562.3-201, humanhuman

TSL 1 (best) BASIC

Gene AC243562.3, Length 1,212 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC243562.3-201ENST00000559866 SMC1BQ8NDV3 1235 aa21.54■■□□□ 1.04
AC243562.3-201ENST00000559866 DNAJC10Q8IXB1 793 aa21.53■■□□□ 1.04
AC243562.3-201ENST00000559866 SOS1Q07889 1333 aaPredicted RBP21.53■■□□□ 1.04
AC243562.3-201ENST00000559866 CACNA1SQ13698 1873 aa21.52■■□□□ 1.04
AC243562.3-201ENST00000559866 POLR3GLQ9BT43 218 aa21.52■■□□□ 1.04
AC243562.3-201ENST00000559866 DICER1Q9UPY3 1922 aaKnown RBP21.52■■□□□ 1.04
AC243562.3-201ENST00000559866 AMOTQ4VCS5 1084 aa21.51■■□□□ 1.03
AC243562.3-201ENST00000559866 BCL2L12Q9HB09 334 aa21.5■■□□□ 1.03
AC243562.3-201ENST00000559866 SCN7AQ01118 1682 aa21.5■■□□□ 1.03
AC243562.3-201ENST00000559866 FER1L6Q2WGJ9 1857 aa21.49■■□□□ 1.03
AC243562.3-201ENST00000559866 HSPA1AP0DMV8 641 aaKnown RBP21.49■■□□□ 1.03
AC243562.3-201ENST00000559866 HSPA1BP0DMV9 641 aaKnown RBP21.49■■□□□ 1.03
AC243562.3-201ENST00000559866 NFIXQ14938 502 aa21.49■■□□□ 1.03
AC243562.3-201ENST00000559866 C1orf141Q5JVX7 400 aa21.49■■□□□ 1.03
AC243562.3-201ENST00000559866 COL15A1P39059 1388 aa21.48■■□□□ 1.03
AC243562.3-201ENST00000559866 POTECB2RU33 542 aa21.48■■□□□ 1.03
AC243562.3-201ENST00000559866 ZC3H4Q9UPT8 1303 aaKnown RBP21.48■■□□□ 1.03
AC243562.3-201ENST00000559866 GLTPD2A6NH11 291 aa21.47■■□□□ 1.03
AC243562.3-201ENST00000559866 NFKBIEO00221 500 aa21.47■■□□□ 1.03
AC243562.3-201ENST00000559866 CYP19A1P11511 503 aaPredicted RBP21.47■■□□□ 1.03
AC243562.3-201ENST00000559866 SULT6B1Q6IMI4 303 aa21.47■■□□□ 1.03
AC243562.3-201ENST00000559866 LMNB1P20700 586 aa21.46■■□□□ 1.03
AC243562.3-201ENST00000559866 LGR6Q9HBX8 967 aa21.46■■□□□ 1.03
AC243562.3-201ENST00000559866 ZBTB1Q9Y2K1 713 aa21.46■■□□□ 1.03
AC243562.3-201ENST00000559866 ZPR1O75312 459 aa21.45■■□□□ 1.02
AC243562.3-201ENST00000559866 TRIM26Q12899 539 aaPredicted RBP21.45■■□□□ 1.02
AC243562.3-201ENST00000559866 SLC39A6Q13433 755 aa21.45■■□□□ 1.02
AC243562.3-201ENST00000559866 VEGFAP15692 232 aaPredicted RBP21.44■■□□□ 1.02
AC243562.3-201ENST00000559866 SLC52A2Q9HAB3 445 aa21.44■■□□□ 1.02
AC243562.3-201ENST00000559866 NARFQ9UHQ1 456 aa21.44■■□□□ 1.02
AC243562.3-201ENST00000559866 ARFGEF2Q9Y6D5 1785 aa21.43■■□□□ 1.02
AC243562.3-201ENST00000559866 SERPINB2P05120 415 aa21.43■■□□□ 1.02
AC243562.3-201ENST00000559866 PANK3Q9H999 370 aa21.43■■□□□ 1.02
AC243562.3-201ENST00000559866 SIPA1L3O60292 1781 aaPredicted RBP21.42■■□□□ 1.02
AC243562.3-201ENST00000559866 IL13P35225 146 aa21.42■■□□□ 1.02
AC243562.3-201ENST00000559866 C2CD5Q86YS7 1000 aa21.41■■□□□ 1.02
AC243562.3-201ENST00000559866 TTLL6Q8N841 843 aa21.41■■□□□ 1.02
AC243562.3-201ENST00000559866 AKAP4Q5JQC9 854 aa21.4■■□□□ 1.02
AC243562.3-201ENST00000559866 SLX4Q8IY92 1834 aa21.39■■□□□ 1.02
AC243562.3-201ENST00000559866 BCORQ6W2J9 1755 aa21.39■■□□□ 1.01
AC243562.3-201ENST00000559866 RNMTO43148 476 aaKnown RBP21.38■■□□□ 1.01
AC243562.3-201ENST00000559866 POTEIP0CG38 1075 aa21.38■■□□□ 1.01
AC243562.3-201ENST00000559866 POTEJP0CG39 1038 aa21.38■■□□□ 1.01
AC243562.3-201ENST00000559866 BICDL1Q6ZP65 573 aa21.37■■□□□ 1.01
AC243562.3-201ENST00000559866 MORC1Q86VD1 984 aa21.37■■□□□ 1.01
AC243562.3-201ENST00000559866 CCDC24Q8N4L8 307 aa21.37■■□□□ 1.01
AC243562.3-201ENST00000559866 ZNF219Q9P2Y4 722 aaPredicted RBP21.37■■□□□ 1.01
AC243562.3-201ENST00000559866 TIMELESSQ9UNS1 1208 aa21.37■■□□□ 1.01
AC243562.3-201ENST00000559866 CANXP27824 592 aaKnown RBP21.35■■□□□ 1.01
AC243562.3-201ENST00000559866 H0YIN7 160 aa21.34■■□□□ 1.01
AC243562.3-201ENST00000559866 C21orf2O43822 256 aa21.34■■□□□ 1.01
AC243562.3-201ENST00000559866 HMOX1P09601 288 aa21.34■■□□□ 1.01
AC243562.3-201ENST00000559866 TBC1D9BQ66K14 1250 aa21.34■■□□□ 1.01
AC243562.3-201ENST00000559866 MKRN1Q9UHC7 482 aaKnown RBP21.34■■□□□ 1.01
AC243562.3-201ENST00000559866 HSPA5P11021 654 aaKnown RBP21.32■■□□□ 1
AC243562.3-201ENST00000559866 EIF5P55010 431 aaKnown RBP21.32■■□□□ 1
AC243562.3-201ENST00000559866 MTHFSDQ2M296 383 aaKnown RBP21.32■■□□□ 1
AC243562.3-201ENST00000559866 ADAMTSL1Q8N6G6 1762 aa21.31■■□□□ 1
AC243562.3-201ENST00000559866 ERFEQ4G0M1 354 aa21.31■■□□□ 1
AC243562.3-201ENST00000559866 PRR5LQ6MZQ0 368 aa21.31■■□□□ 1
AC243562.3-201ENST00000559866 ZNF622Q969S3 477 aaKnown RBP eCLIP21.31■■□□□ 1
AC243562.3-201ENST00000559866 SCN4AP35499 1836 aa21.3■■□□□ 1
AC243562.3-201ENST00000559866 DDNO94850 711 aaPredicted RBP21.3■■□□□ 1
AC243562.3-201ENST00000559866 VSIG10Q8N0Z9 540 aa21.3■■□□□ 1
AC243562.3-201ENST00000559866 FOXN1O15353 648 aa21.29■■□□□ 1
AC243562.3-201ENST00000559866 CHADLQ6NUI6 762 aa21.29■■□□□ 1
AC243562.3-201ENST00000559866 CREBZFQ9NS37 354 aa21.29■■□□□ 1
AC243562.3-201ENST00000559866 DPY19L2Q6NUT2 758 aa21.28■■□□□ 1
AC243562.3-201ENST00000559866 CLSPNQ9HAW4 1339 aa21.28■■□□□ 1
AC243562.3-201ENST00000559866 CNTNAP1P78357 1384 aa21.27■■□□□ 1
AC243562.3-201ENST00000559866 BRIP1Q9BX63 1249 aa21.27■■□□□ 1
AC243562.3-201ENST00000559866 TBC1D2BQ9UPU7 963 aa21.27■■□□□ 1
AC243562.3-201ENST00000559866 LTBP3Q9NS15 1303 aa21.27■□□□□ 0.99
AC243562.3-201ENST00000559866 ZNF496Q96IT1 587 aaPredicted RBP21.26■□□□□ 0.99
AC243562.3-201ENST00000559866 PASKQ96RG2 1323 aa21.26■□□□□ 0.99
AC243562.3-201ENST00000559866 COL3A1P02461 1466 aaPredicted RBP21.26■□□□□ 0.99
AC243562.3-201ENST00000559866 HEG1Q9ULI3 1381 aa21.25■□□□□ 0.99
AC243562.3-201ENST00000559866 AMER1Q5JTC6 1135 aaPredicted RBP21.25■□□□□ 0.99
AC243562.3-201ENST00000559866 TAOK3Q9H2K8 898 aa21.25■□□□□ 0.99
AC243562.3-201ENST00000559866 PDE6BP35913 854 aa21.24■□□□□ 0.99
AC243562.3-201ENST00000559866 EIF4G2P78344 907 aaKnown RBP eCLIP21.24■□□□□ 0.99
AC243562.3-201ENST00000559866 ZNF330Q9Y3S2 320 aaPredicted RBP21.24■□□□□ 0.99
AC243562.3-201ENST00000559866 PRPF40BQ6NWY9 871 aaKnown RBP21.23■□□□□ 0.99
AC243562.3-201ENST00000559866 A0A087WZG4 1122 aa21.21■□□□□ 0.99
AC243562.3-201ENST00000559866 CAMTA2O94983 1202 aa21.21■□□□□ 0.99
AC243562.3-201ENST00000559866 STARD3NLO95772 234 aa21.21■□□□□ 0.99
AC243562.3-201ENST00000559866 A1BGP04217 495 aa21.21■□□□□ 0.99
AC243562.3-201ENST00000559866 SRGNP10124 158 aa21.21■□□□□ 0.99
AC243562.3-201ENST00000559866 TTC5Q8N0Z6 440 aa21.21■□□□□ 0.99
AC243562.3-201ENST00000559866 KNSTRNQ9Y448 316 aa21.21■□□□□ 0.99
AC243562.3-201ENST00000559866 ZNF541Q9H0D2 1346 aa21.21■□□□□ 0.99
AC243562.3-201ENST00000559866 IL17REQ8NFR9 667 aa21.2■□□□□ 0.98
AC243562.3-201ENST00000559866 PCGF6Q9BYE7 350 aa21.2■□□□□ 0.98
AC243562.3-201ENST00000559866 LTBP1Q14766 1721 aa21.19■□□□□ 0.98
AC243562.3-201ENST00000559866 PIP4K2AP48426 406 aaPredicted RBP21.19■□□□□ 0.98
AC243562.3-201ENST00000559866 VEGFBP49765 207 aa21.19■□□□□ 0.98
AC243562.3-201ENST00000559866 STYK1Q6J9G0 422 aa21.19■□□□□ 0.98
AC243562.3-201ENST00000559866 ZNF790Q6PG37 636 aa21.19■□□□□ 0.98
AC243562.3-201ENST00000559866 OLFM4Q6UX06 510 aa21.19■□□□□ 0.98
AC243562.3-201ENST00000559866 CNBD1Q8NA66 436 aa21.19■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms