RNA–Protein interactions for RNA: ENST00000559550.1

CASC4-210, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 264 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-210ENST00000559550 HCN2Q9UL51 889 aa6.99□□□□□ -1.29
CASC4-210ENST00000559550 A6NJR5 290 aa6.98□□□□□ -1.29
CASC4-210ENST00000559550 POM121CA8CG34 1229 aa6.98□□□□□ -1.29
CASC4-210ENST00000559550 NEURL1BA8MQ27 555 aa6.98□□□□□ -1.29
CASC4-210ENST00000559550 DYRK3O43781 588 aa6.98□□□□□ -1.29
CASC4-210ENST00000559550 IL2RAP01589 272 aa6.98□□□□□ -1.29
CASC4-210ENST00000559550 CENPCQ03188 943 aa6.98□□□□□ -1.29
CASC4-210ENST00000559550 PROSER2Q86WR7 435 aaPredicted RBP6.98□□□□□ -1.29
CASC4-210ENST00000559550 ESYT1Q9BSJ8 1104 aa6.97□□□□□ -1.29
CASC4-210ENST00000559550 FHDC1Q9C0D6 1143 aaPredicted RBP6.97□□□□□ -1.29
CASC4-210ENST00000559550 RAB6BQ9NRW1 208 aa6.97□□□□□ -1.29
CASC4-210ENST00000559550 SPATA31C1P0DKV0 1188 aa6.96□□□□□ -1.3
CASC4-210ENST00000559550 MSX1P28360 303 aa6.96□□□□□ -1.3
CASC4-210ENST00000559550 WASHC4Q2M389 1173 aa6.96□□□□□ -1.3
CASC4-210ENST00000559550 CNKSR1Q969H4 720 aa6.96□□□□□ -1.3
CASC4-210ENST00000559550 PLVAPQ9BX97 442 aa6.96□□□□□ -1.3
CASC4-210ENST00000559550 CRISPLD1Q9H336 500 aa6.96□□□□□ -1.3
CASC4-210ENST00000559550 C4orf17Q53FE4 359 aa6.95□□□□□ -1.3
CASC4-210ENST00000559550 FCHSD1Q86WN1 690 aa6.95□□□□□ -1.3
CASC4-210ENST00000559550 ADAMTS19Q8TE59 1207 aa6.95□□□□□ -1.3
CASC4-210ENST00000559550 DNAAF2Q9NVR5 837 aaKnown RBP6.95□□□□□ -1.3
CASC4-210ENST00000559550 ZNF330Q9Y3S2 320 aaPredicted RBP6.95□□□□□ -1.3
CASC4-210ENST00000559550 GNRH1P01148 92 aa6.94□□□□□ -1.3
CASC4-210ENST00000559550 EIF4G2P78344 907 aaKnown RBP eCLIP6.94□□□□□ -1.3
CASC4-210ENST00000559550 EFHC2Q5JST6 749 aa6.94□□□□□ -1.3
CASC4-210ENST00000559550 PRSS36Q5K4E3 855 aa6.94□□□□□ -1.3
CASC4-210ENST00000559550 ZSCAN10Q96SZ4 725 aaPredicted RBP6.94□□□□□ -1.3
CASC4-210ENST00000559550 CSB-PGBD3P0DP91 1061 aa6.93□□□□□ -1.3
CASC4-210ENST00000559550 RNF20Q5VTR2 975 aa6.93□□□□□ -1.3
CASC4-210ENST00000559550 WWC1Q8IX03 1113 aa6.93□□□□□ -1.3
CASC4-210ENST00000559550 PGBD3Q8N328 593 aa6.93□□□□□ -1.3
CASC4-210ENST00000559550 XAGE2Q96GT9 111 aa6.93□□□□□ -1.3
CASC4-210ENST00000559550 ZMYND15Q9H091 742 aa6.93□□□□□ -1.3
CASC4-210ENST00000559550 ALG2Q9H553 416 aa6.93□□□□□ -1.3
CASC4-210ENST00000559550 CEP126Q9P2H0 1117 aa6.93□□□□□ -1.3
CASC4-210ENST00000559550 NBPF11Q86T75 865 aa6.92□□□□□ -1.3
CASC4-210ENST00000559550 C14orf37Q86TY3 774 aa6.92□□□□□ -1.3
CASC4-210ENST00000559550 MCCD1P59942 119 aaPredicted RBP6.91□□□□□ -1.3
CASC4-210ENST00000559550 SEMA3FQ13275 785 aa6.91□□□□□ -1.3
CASC4-210ENST00000559550 PHTF2Q8N3S3 785 aa6.91□□□□□ -1.3
CASC4-210ENST00000559550 ZCCHC2Q9C0B9 1178 aaKnown RBP6.91□□□□□ -1.3
CASC4-210ENST00000559550 AVENQ9NQS1 362 aaPredicted RBP6.91□□□□□ -1.3
CASC4-210ENST00000559550 PCDHB11Q9Y5F2 797 aa6.91□□□□□ -1.3
CASC4-210ENST00000559550 ADH6P28332 368 aa6.9□□□□□ -1.3
CASC4-210ENST00000559550 SOX11P35716 441 aa6.9□□□□□ -1.3
CASC4-210ENST00000559550 TSGA10IPQ3SY00 556 aa6.9□□□□□ -1.3
CASC4-210ENST00000559550 FAM182BQ5T319 152 aa6.9□□□□□ -1.3
CASC4-210ENST00000559550 HDGFL1Q5TGJ6 251 aa6.9□□□□□ -1.3
CASC4-210ENST00000559550 PIK3CDO00329 1044 aa6.89□□□□□ -1.31
CASC4-210ENST00000559550 LRP8Q14114 963 aa6.89□□□□□ -1.31
CASC4-210ENST00000559550 GNASQ5JWF2 1037 aa6.89□□□□□ -1.31
CASC4-210ENST00000559550 GLMNQ92990 594 aa6.89□□□□□ -1.31
CASC4-210ENST00000559550 CCDC85AQ96PX6 553 aaPredicted RBP6.89□□□□□ -1.31
CASC4-210ENST00000559550 ZNF777Q9ULD5 760 aaPredicted RBP6.89□□□□□ -1.31
CASC4-210ENST00000559550 TIMELESSQ9UNS1 1208 aa6.89□□□□□ -1.31
CASC4-210ENST00000559550 PCDHGC4Q9Y5F7 938 aa6.89□□□□□ -1.31
CASC4-210ENST00000559550 HYAL3O43820 417 aaPredicted RBP6.88□□□□□ -1.31
CASC4-210ENST00000559550 COL9A3Q14050 684 aaPredicted RBP6.88□□□□□ -1.31
CASC4-210ENST00000559550 TMEM214Q6NUQ4 689 aaKnown RBP6.88□□□□□ -1.31
CASC4-210ENST00000559550 ZNF592Q92610 1267 aa6.88□□□□□ -1.31
CASC4-210ENST00000559550 MDFIQ99750 246 aa6.88□□□□□ -1.31
CASC4-210ENST00000559550 TNP2Q05952 138 aa6.87□□□□□ -1.31
CASC4-210ENST00000559550 FIGNL1Q6PIW4 674 aa6.87□□□□□ -1.31
CASC4-210ENST00000559550 UCN2Q96RP3 112 aa6.87□□□□□ -1.31
CASC4-210ENST00000559550 CDCA7Q9BWT1 371 aaPredicted RBP6.87□□□□□ -1.31
CASC4-210ENST00000559550 CHIC2Q9UKJ5 165 aa6.87□□□□□ -1.31
CASC4-210ENST00000559550 MAPTP10636 758 aaKnown RBP6.86□□□□□ -1.31
CASC4-210ENST00000559550 ATP4AP20648 1035 aa6.86□□□□□ -1.31
CASC4-210ENST00000559550 SLFNL1Q499Z3 407 aa6.86□□□□□ -1.31
CASC4-210ENST00000559550 NLRP8Q86W28 1048 aa6.86□□□□□ -1.31
CASC4-210ENST00000559550 PPARGC1BQ86YN6 1023 aaKnown RBP6.86□□□□□ -1.31
CASC4-210ENST00000559550 RHBDD1Q8TEB9 315 aa6.86□□□□□ -1.31
CASC4-210ENST00000559550 CD33P20138 364 aa6.85□□□□□ -1.31
CASC4-210ENST00000559550 ARID3CA6NKF2 412 aa6.84□□□□□ -1.31
CASC4-210ENST00000559550 ATXN7O15265 892 aaPredicted RBP6.84□□□□□ -1.31
CASC4-210ENST00000559550 PCBP4P57723 403 aaKnown RBP6.84□□□□□ -1.31
CASC4-210ENST00000559550 ZNF468Q5VIY5 522 aaPredicted RBP6.84□□□□□ -1.31
CASC4-210ENST00000559550 TBC1D9Q6ZT07 1266 aa6.84□□□□□ -1.31
CASC4-210ENST00000559550 CALR3Q96L12 384 aaKnown RBP6.84□□□□□ -1.31
CASC4-210ENST00000559550 DCDC2BA2VCK2 349 aa6.83□□□□□ -1.32
CASC4-210ENST00000559550 APBA3O96018 575 aa6.83□□□□□ -1.32
CASC4-210ENST00000559550 H2AFB1P0C5Y9 115 aa6.83□□□□□ -1.32
CASC4-210ENST00000559550 H2AFB2P0C5Z0 115 aa6.83□□□□□ -1.32
CASC4-210ENST00000559550 PRRT3Q5FWE3 981 aa6.83□□□□□ -1.32
CASC4-210ENST00000559550 PLPP7Q8NBV4 271 aa6.83□□□□□ -1.32
CASC4-210ENST00000559550 DOLKQ9UPQ8 538 aa6.83□□□□□ -1.32
CASC4-210ENST00000559550 ELOA3CA0A087WX78 387 aaPredicted RBP6.82□□□□□ -1.32
CASC4-210ENST00000559550 SPDYE3A6NKU9 549 aa6.82□□□□□ -1.32
CASC4-210ENST00000559550 ELOA3DA6NLF2 546 aaPredicted RBP6.82□□□□□ -1.32
CASC4-210ENST00000559550 FAM229AH3BQW9 127 aa6.82□□□□□ -1.32
CASC4-210ENST00000559550 SKIP12755 728 aa6.82□□□□□ -1.32
CASC4-210ENST00000559550 GTF2E1P29083 439 aaPredicted RBP6.82□□□□□ -1.32
CASC4-210ENST00000559550 ELOA3BQ3SY89 546 aa6.82□□□□□ -1.32
CASC4-210ENST00000559550 ELOA3Q8NG57 546 aa6.82□□□□□ -1.32
CASC4-210ENST00000559550 C1orf115Q9H7X2 142 aa6.82□□□□□ -1.32
CASC4-210ENST00000559550 STAU1O95793 577 aaKnown RBP6.81□□□□□ -1.32
CASC4-210ENST00000559550 PLA2G4AP47712 749 aa6.81□□□□□ -1.32
CASC4-210ENST00000559550 OXLD1Q5BKU9 147 aa6.81□□□□□ -1.32
CASC4-210ENST00000559550 DEPDC4Q8N2C3 294 aa6.81□□□□□ -1.32
CASC4-210ENST00000559550 NFATC2IPQ8NCF5 419 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms