RNA–Protein interactions for RNA: ENST00000559545.5

CDK12-204, Transcript of cyclin dependent kinase 12, humanhuman

TSL 5

Gene CDK12, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK12-204ENST00000559545 PLEKHO1Q53GL0 409 aaPredicted RBP7.3□□□□□ -1.24
CDK12-204ENST00000559545 IFNL2Q8IZJ0 200 aa7.3□□□□□ -1.24
CDK12-204ENST00000559545 CWC22Q9HCG8 908 aaKnown RBP7.3□□□□□ -1.24
CDK12-204ENST00000559545 CICQ96RK0 1608 aaPredicted RBP7.3□□□□□ -1.24
CDK12-204ENST00000559545 PCDH11XQ9BZA7 1347 aa7.29□□□□□ -1.24
CDK12-204ENST00000559545 PCDH11YQ9BZA8 1340 aa7.29□□□□□ -1.24
CDK12-204ENST00000559545 HSP90AB1P08238 724 aaKnown RBP7.29□□□□□ -1.24
CDK12-204ENST00000559545 PHKG2P15735 406 aa7.29□□□□□ -1.24
CDK12-204ENST00000559545 POM121Q96HA1 1249 aa7.29□□□□□ -1.24
CDK12-204ENST00000559545 NUDCQ9Y266 331 aa7.29□□□□□ -1.24
CDK12-204ENST00000559545 TOGARAM1Q9Y4F4 1720 aa7.29□□□□□ -1.24
CDK12-204ENST00000559545 TNNT2P45379 298 aaPredicted RBP7.28□□□□□ -1.24
CDK12-204ENST00000559545 AKAP4Q5JQC9 854 aa7.28□□□□□ -1.24
CDK12-204ENST00000559545 SULT6B1Q6IMI4 303 aa7.28□□□□□ -1.24
CDK12-204ENST00000559545 LTV1Q96GA3 475 aaPredicted RBP7.28□□□□□ -1.24
CDK12-204ENST00000559545 DCAF5Q96JK2 942 aa7.28□□□□□ -1.24
CDK12-204ENST00000559545 CFAP53Q96M91 514 aa7.28□□□□□ -1.24
CDK12-204ENST00000559545 PSMD1Q99460 953 aa7.28□□□□□ -1.24
CDK12-204ENST00000559545 PNNQ9H307 717 aaKnown RBP7.28□□□□□ -1.24
CDK12-204ENST00000559545 CEMIPQ8WUJ3 1361 aa7.28□□□□□ -1.24
CDK12-204ENST00000559545 PDE4AP27815 886 aa7.27□□□□□ -1.25
CDK12-204ENST00000559545 AMHR2Q16671 573 aa7.27□□□□□ -1.25
CDK12-204ENST00000559545 SND1Q7KZF4 910 aaKnown RBP eCLIP7.27□□□□□ -1.25
CDK12-204ENST00000559545 WWC1Q8IX03 1113 aa7.27□□□□□ -1.25
CDK12-204ENST00000559545 PARP9Q8IXQ6 854 aa7.27□□□□□ -1.25
CDK12-204ENST00000559545 ANKRD13AQ8IZ07 590 aa7.27□□□□□ -1.25
CDK12-204ENST00000559545 LARP6Q9BRS8 491 aaKnown RBP7.27□□□□□ -1.25
CDK12-204ENST00000559545 USTQ9Y2C2 406 aa7.27□□□□□ -1.25
CDK12-204ENST00000559545 MRC1P22897 1456 aa7.27□□□□□ -1.25
CDK12-204ENST00000559545 CACNA1FO60840 1977 aa7.27□□□□□ -1.25
CDK12-204ENST00000559545 MYH14Q7Z406 1995 aaKnown RBP7.27□□□□□ -1.25
CDK12-204ENST00000559545 NUP188Q5SRE5 1749 aa7.27□□□□□ -1.25
CDK12-204ENST00000559545 DOT1LQ8TEK3 1739 aa7.27□□□□□ -1.25
CDK12-204ENST00000559545 UBR2Q8IWV8 1755 aa7.26□□□□□ -1.25
CDK12-204ENST00000559545 KCNQ2O43526 872 aa7.26□□□□□ -1.25
CDK12-204ENST00000559545 TRIM37O94972 964 aa7.26□□□□□ -1.25
CDK12-204ENST00000559545 BAG6P46379 1132 aa7.26□□□□□ -1.25
CDK12-204ENST00000559545 MTHFSDQ2M296 383 aaKnown RBP7.26□□□□□ -1.25
CDK12-204ENST00000559545 SLC27A3Q5K4L6 730 aa7.26□□□□□ -1.25
CDK12-204ENST00000559545 PTF1AQ7RTS3 328 aa7.26□□□□□ -1.25
CDK12-204ENST00000559545 USHBP1Q8N6Y0 703 aa7.26□□□□□ -1.25
CDK12-204ENST00000559545 GAS2L2Q8NHY3 880 aa7.26□□□□□ -1.25
CDK12-204ENST00000559545 PNISRQ8TF01 805 aaKnown RBP7.26□□□□□ -1.25
CDK12-204ENST00000559545 RBM42Q9BTD8 480 aaKnown RBP7.26□□□□□ -1.25
CDK12-204ENST00000559545 BABAM1Q9NWV8 329 aa7.26□□□□□ -1.25
CDK12-204ENST00000559545 PAPPAQ13219 1627 aa7.26□□□□□ -1.25
CDK12-204ENST00000559545 MLLT3P42568 568 aaPredicted RBP7.25□□□□□ -1.25
CDK12-204ENST00000559545 PRIM1P49642 420 aaKnown RBP7.25□□□□□ -1.25
CDK12-204ENST00000559545 FAM182BQ5T319 152 aa7.25□□□□□ -1.25
CDK12-204ENST00000559545 IL17REQ8NFR9 667 aa7.25□□□□□ -1.25
CDK12-204ENST00000559545 PIGBQ92521 554 aa7.25□□□□□ -1.25
CDK12-204ENST00000559545 PHACTR3Q96KR7 559 aa7.25□□□□□ -1.25
CDK12-204ENST00000559545 KDM6AO15550 1401 aaPredicted RBP7.25□□□□□ -1.25
CDK12-204ENST00000559545 HEG1Q9ULI3 1381 aa7.24□□□□□ -1.25
CDK12-204ENST00000559545 RNMTO43148 476 aaKnown RBP7.24□□□□□ -1.25
CDK12-204ENST00000559545 CLSTN1O94985 981 aa7.24□□□□□ -1.25
CDK12-204ENST00000559545 APBA3O96018 575 aa7.24□□□□□ -1.25
CDK12-204ENST00000559545 CERS3Q8IU89 383 aa7.24□□□□□ -1.25
CDK12-204ENST00000559545 NGEFQ8N5V2 710 aa7.24□□□□□ -1.25
CDK12-204ENST00000559545 DDX54Q8TDD1 881 aaKnown RBP7.24□□□□□ -1.25
CDK12-204ENST00000559545 SMARCC1Q92922 1105 aaPredicted RBP7.24□□□□□ -1.25
CDK12-204ENST00000559545 CALR3Q96L12 384 aaKnown RBP7.24□□□□□ -1.25
CDK12-204ENST00000559545 SPATA32Q96LK8 384 aa7.24□□□□□ -1.25
CDK12-204ENST00000559545 DRC1Q96MC2 740 aa7.24□□□□□ -1.25
CDK12-204ENST00000559545 IGSF5Q9NSI5 407 aa7.24□□□□□ -1.25
CDK12-204ENST00000559545 BCCIPQ9P287 314 aaKnown RBP eCLIP7.24□□□□□ -1.25
CDK12-204ENST00000559545 RBM47A0AV96 593 aaKnown RBP7.23□□□□□ -1.25
CDK12-204ENST00000559545 UNCXA6NJT0 531 aa7.23□□□□□ -1.25
CDK12-204ENST00000559545 GNAT3A8MTJ3 354 aa7.23□□□□□ -1.25
CDK12-204ENST00000559545 SF3B2Q13435 895 aaKnown RBP7.23□□□□□ -1.25
CDK12-204ENST00000559545 TTLL12Q14166 644 aaPredicted RBP7.23□□□□□ -1.25
CDK12-204ENST00000559545 TXNRD1Q16881 649 aa7.23□□□□□ -1.25
CDK12-204ENST00000559545 RC3H1Q5TC82 1133 aaKnown RBP7.23□□□□□ -1.25
CDK12-204ENST00000559545 DEFB132Q7Z7B7 95 aa7.23□□□□□ -1.25
CDK12-204ENST00000559545 AKT1S1Q96B36 256 aa7.23□□□□□ -1.25
CDK12-204ENST00000559545 SLC52A2Q9HAB3 445 aa7.23□□□□□ -1.25
CDK12-204ENST00000559545 LGR6Q9HBX8 967 aa7.23□□□□□ -1.25
CDK12-204ENST00000559545 ATG3Q9NT62 314 aa7.23□□□□□ -1.25
CDK12-204ENST00000559545 IVNS1ABPQ9Y6Y0 642 aa7.23□□□□□ -1.25
CDK12-204ENST00000559545 COL5A3P25940 1745 aaPredicted RBP7.23□□□□□ -1.25
CDK12-204ENST00000559545 UBR3Q6ZT12 1888 aa7.23□□□□□ -1.25
CDK12-204ENST00000559545 CCER2I3L3R5 266 aa7.22□□□□□ -1.25
CDK12-204ENST00000559545 IRF6O14896 467 aa7.22□□□□□ -1.25
CDK12-204ENST00000559545 SMARCA5O60264 1052 aaPredicted RBP7.22□□□□□ -1.25
CDK12-204ENST00000559545 HMOX1P09601 288 aa7.22□□□□□ -1.25
CDK12-204ENST00000559545 U2AF1L5P0DN76 240 aaPredicted RBP7.22□□□□□ -1.25
CDK12-204ENST00000559545 U2AF1Q01081 240 aaKnown RBP eCLIP7.22□□□□□ -1.25
CDK12-204ENST00000559545 EN1Q05925 392 aaPredicted RBP7.22□□□□□ -1.25
CDK12-204ENST00000559545 MAP2K5Q13163 448 aa7.22□□□□□ -1.25
CDK12-204ENST00000559545 EZH2Q15910 746 aaKnown RBP7.22□□□□□ -1.25
CDK12-204ENST00000559545 CC2D2BQ6DHV5 1058 aa7.22□□□□□ -1.25
CDK12-204ENST00000559545 CCDC102AQ96A19 550 aa7.22□□□□□ -1.25
CDK12-204ENST00000559545 LRRC4BQ9NT99 713 aa7.22□□□□□ -1.25
CDK12-204ENST00000559545 ADAMTS8Q9UP79 889 aa7.22□□□□□ -1.25
CDK12-204ENST00000559545 COG6Q9Y2V7 657 aa7.22□□□□□ -1.25
CDK12-204ENST00000559545 CASZ1Q86V15 1759 aa7.21□□□□□ -1.25
CDK12-204ENST00000559545 SPDYE5A6NIY4 337 aa7.21□□□□□ -1.26
CDK12-204ENST00000559545 PYGBP11216 843 aa7.21□□□□□ -1.26
CDK12-204ENST00000559545 PRKAR2BP31323 418 aa7.21□□□□□ -1.26
CDK12-204ENST00000559545 TMPOP42166 694 aaKnown RBP7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms