RNA–Protein interactions for RNA: ENST00000559299.1

AC025219.1-201, humanhuman

TSL 4 BASIC

Gene AC025219.1, Length 526 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC025219.1-201ENST00000559299 COL15A1P39059 1388 aa16.75■□□□□ 0.27
AC025219.1-201ENST00000559299 CANXP27824 592 aaKnown RBP16.74■□□□□ 0.27
AC025219.1-201ENST00000559299 TGFB2P61812 414 aa16.74■□□□□ 0.27
AC025219.1-201ENST00000559299 FKBP8Q14318 412 aa16.74■□□□□ 0.27
AC025219.1-201ENST00000559299 USPL1Q5W0Q7 1092 aa16.73■□□□□ 0.27
AC025219.1-201ENST00000559299 NARFQ9UHQ1 456 aa16.73■□□□□ 0.27
AC025219.1-201ENST00000559299 MAPK8IP3Q9UPT6 1336 aa16.72■□□□□ 0.27
AC025219.1-201ENST00000559299 C10orf71Q711Q0 1435 aa16.72■□□□□ 0.27
AC025219.1-201ENST00000559299 A0A087WZG4 1122 aa16.72■□□□□ 0.27
AC025219.1-201ENST00000559299 ZEB1P37275 1124 aaPredicted RBP16.72■□□□□ 0.27
AC025219.1-201ENST00000559299 DCTN1Q14203 1278 aa16.72■□□□□ 0.27
AC025219.1-201ENST00000559299 PLEKHF1Q96S99 279 aa16.72■□□□□ 0.27
AC025219.1-201ENST00000559299 DLG5Q8TDM6 1919 aa16.72■□□□□ 0.27
AC025219.1-201ENST00000559299 MYBBP1AQ9BQG0 1328 aaKnown RBP16.71■□□□□ 0.27
AC025219.1-201ENST00000559299 KCNQ3O43525 872 aa16.71■□□□□ 0.27
AC025219.1-201ENST00000559299 NPM2Q86SE8 214 aaKnown RBP16.71■□□□□ 0.27
AC025219.1-201ENST00000559299 ZNF784Q8NCA9 323 aaPredicted RBP16.71■□□□□ 0.27
AC025219.1-201ENST00000559299 N4BP2Q86UW6 1770 aaPredicted RBP16.7■□□□□ 0.26
AC025219.1-201ENST00000559299 TM4SF1P30408 202 aa16.7■□□□□ 0.26
AC025219.1-201ENST00000559299 EIF5P55010 431 aaKnown RBP16.7■□□□□ 0.26
AC025219.1-201ENST00000559299 TAF7Q15545 349 aaPredicted RBP16.7■□□□□ 0.26
AC025219.1-201ENST00000559299 PXDNLA1KZ92 1463 aa16.69■□□□□ 0.26
AC025219.1-201ENST00000559299 IL6STP40189 918 aaPredicted RBP16.69■□□□□ 0.26
AC025219.1-201ENST00000559299 DDR1Q08345 913 aa16.69■□□□□ 0.26
AC025219.1-201ENST00000559299 NFE2L2Q16236 605 aa16.69■□□□□ 0.26
AC025219.1-201ENST00000559299 WWC3Q9ULE0 1092 aa16.69■□□□□ 0.26
AC025219.1-201ENST00000559299 ZNF330Q9Y3S2 320 aaPredicted RBP16.69■□□□□ 0.26
AC025219.1-201ENST00000559299 KIAA1551Q9HCM1 1747 aa16.69■□□□□ 0.26
AC025219.1-201ENST00000559299 A0A0G2JLW4 131 aa16.68■□□□□ 0.26
AC025219.1-201ENST00000559299 POLRMTO00411 1230 aaKnown RBP16.68■□□□□ 0.26
AC025219.1-201ENST00000559299 SNRPA1P09661 255 aaKnown RBP16.68■□□□□ 0.26
AC025219.1-201ENST00000559299 PNISRQ8TF01 805 aaKnown RBP16.68■□□□□ 0.26
AC025219.1-201ENST00000559299 A1BGP04217 495 aa16.67■□□□□ 0.26
AC025219.1-201ENST00000559299 NFIXQ14938 502 aa16.67■□□□□ 0.26
AC025219.1-201ENST00000559299 DPEP1P16444 411 aa16.66■□□□□ 0.26
AC025219.1-201ENST00000559299 BCL2L12Q9HB09 334 aa16.66■□□□□ 0.26
AC025219.1-201ENST00000559299 BCS1LQ9Y276 419 aa16.66■□□□□ 0.26
AC025219.1-201ENST00000559299 USP16Q9Y5T5 823 aa16.66■□□□□ 0.26
AC025219.1-201ENST00000559299 TBC1D2BQ9UPU7 963 aa16.65■□□□□ 0.26
AC025219.1-201ENST00000559299 AFDNP55196 1824 aaKnown RBP16.64■□□□□ 0.25
AC025219.1-201ENST00000559299 SERPINB2P05120 415 aa16.64■□□□□ 0.25
AC025219.1-201ENST00000559299 MIS18AQ9NYP9 233 aa16.64■□□□□ 0.25
AC025219.1-201ENST00000559299 PIM2Q9P1W9 311 aa16.64■□□□□ 0.25
AC025219.1-201ENST00000559299 SCN7AQ01118 1682 aa16.64■□□□□ 0.25
AC025219.1-201ENST00000559299 BRCA1P38398 1863 aaKnown RBP16.64■□□□□ 0.25
AC025219.1-201ENST00000559299 KDM3BQ7LBC6 1761 aa16.64■□□□□ 0.25
AC025219.1-201ENST00000559299 NRXN2Q9P2S2 1712 aa16.63■□□□□ 0.25
AC025219.1-201ENST00000559299 PRAMEF22A3QJZ6 481 aa16.63■□□□□ 0.25
AC025219.1-201ENST00000559299 RIPK4P57078 832 aa16.63■□□□□ 0.25
AC025219.1-201ENST00000559299 WDR43Q15061 677 aaKnown RBP eCLIP16.63■□□□□ 0.25
AC025219.1-201ENST00000559299 BICDL1Q6ZP65 573 aa16.63■□□□□ 0.25
AC025219.1-201ENST00000559299 PRKRIP1Q9H875 184 aaPredicted RBP16.63■□□□□ 0.25
AC025219.1-201ENST00000559299 LMOD3Q0VAK6 560 aa16.62■□□□□ 0.25
AC025219.1-201ENST00000559299 DZIP3Q86Y13 1208 aaKnown RBP16.62■□□□□ 0.25
AC025219.1-201ENST00000559299 THUMPD2Q9BTF0 503 aaKnown RBP16.62■□□□□ 0.25
AC025219.1-201ENST00000559299 LAMB4A4D0S4 1761 aa16.61■□□□□ 0.25
AC025219.1-201ENST00000559299 KCNA3P22001 575 aa16.61■□□□□ 0.25
AC025219.1-201ENST00000559299 DALRD3Q5D0E6 543 aaKnown RBP16.61■□□□□ 0.25
AC025219.1-201ENST00000559299 TBC1D9BQ66K14 1250 aa16.61■□□□□ 0.25
AC025219.1-201ENST00000559299 BCORQ6W2J9 1755 aa16.6■□□□□ 0.25
AC025219.1-201ENST00000559299 CAMTA2O94983 1202 aa16.6■□□□□ 0.25
AC025219.1-201ENST00000559299 CHRNA5P30532 468 aa16.6■□□□□ 0.25
AC025219.1-201ENST00000559299 TMPOP42166 694 aaKnown RBP16.6■□□□□ 0.25
AC025219.1-201ENST00000559299 PIP4K2AP48426 406 aaPredicted RBP16.6■□□□□ 0.25
AC025219.1-201ENST00000559299 ARFGEF1Q9Y6D6 1849 aa16.6■□□□□ 0.25
AC025219.1-201ENST00000559299 EIF4A1P60842 406 aaKnown RBP16.59■□□□□ 0.25
AC025219.1-201ENST00000559299 ARHGAP27Q6ZUM4 889 aa16.59■□□□□ 0.25
AC025219.1-201ENST00000559299 RUNDC1Q96C34 613 aa16.59■□□□□ 0.25
AC025219.1-201ENST00000559299 SETDB2Q96T68 719 aa16.59■□□□□ 0.25
AC025219.1-201ENST00000559299 ZNF652Q9Y2D9 606 aa16.59■□□□□ 0.25
AC025219.1-201ENST00000559299 CARMIL3Q8ND23 1372 aa16.59■□□□□ 0.25
AC025219.1-201ENST00000559299 NPHP1O15259 732 aa16.58■□□□□ 0.24
AC025219.1-201ENST00000559299 GIGYF1O75420 1035 aaPredicted RBP16.58■□□□□ 0.24
AC025219.1-201ENST00000559299 CCDC146Q8IYE0 955 aa16.58■□□□□ 0.24
AC025219.1-201ENST00000559299 ATP10DQ9P241 1426 aa16.58■□□□□ 0.24
AC025219.1-201ENST00000559299 NBPF26B4DH59 902 aa16.57■□□□□ 0.24
AC025219.1-201ENST00000559299 NEUROD2Q15784 382 aa16.57■□□□□ 0.24
AC025219.1-201ENST00000559299 NBPF10Q6P3W6 841 aaKnown RBP16.57■□□□□ 0.24
AC025219.1-201ENST00000559299 CLEC4GQ6UXB4 293 aa16.57■□□□□ 0.24
AC025219.1-201ENST00000559299 NBPF15Q8N660 670 aa16.57■□□□□ 0.24
AC025219.1-201ENST00000559299 BABAM1Q9NWV8 329 aa16.57■□□□□ 0.24
AC025219.1-201ENST00000559299 TSPYL4Q9UJ04 414 aa16.57■□□□□ 0.24
AC025219.1-201ENST00000559299 ADAMTS8Q9UP79 889 aa16.57■□□□□ 0.24
AC025219.1-201ENST00000559299 DLEC1Q9Y238 1755 aa16.56■□□□□ 0.24
AC025219.1-201ENST00000559299 ADCY9O60503 1353 aa16.56■□□□□ 0.24
AC025219.1-201ENST00000559299 H0YIN7 160 aa16.56■□□□□ 0.24
AC025219.1-201ENST00000559299 RGL2O15211 777 aa16.56■□□□□ 0.24
AC025219.1-201ENST00000559299 C2CD5Q86YS7 1000 aa16.56■□□□□ 0.24
AC025219.1-201ENST00000559299 PDZRN3Q9UPQ7 1066 aa16.56■□□□□ 0.24
AC025219.1-201ENST00000559299 RRP7AQ9Y3A4 280 aaKnown RBP16.56■□□□□ 0.24
AC025219.1-201ENST00000559299 PDE6BP35913 854 aa16.55■□□□□ 0.24
AC025219.1-201ENST00000559299 PRR5LQ6MZQ0 368 aa16.55■□□□□ 0.24
AC025219.1-201ENST00000559299 CNBD1Q8NA66 436 aa16.55■□□□□ 0.24
AC025219.1-201ENST00000559299 BRIP1Q9BX63 1249 aa16.55■□□□□ 0.24
AC025219.1-201ENST00000559299 GPBP1L1Q9HC44 474 aaPredicted RBP16.55■□□□□ 0.24
AC025219.1-201ENST00000559299 ST5P78524 1137 aa16.54■□□□□ 0.24
AC025219.1-201ENST00000559299 UTRNP46939 3433 aa16.53■□□□□ 0.24
AC025219.1-201ENST00000559299 ANKRD31Q8N7Z5 1873 aa16.53■□□□□ 0.24
AC025219.1-201ENST00000559299 TTLL6Q8N841 843 aa16.53■□□□□ 0.24
AC025219.1-201ENST00000559299 ERBB4Q15303 1308 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms