RNA–Protein interactions for RNA: ENST00000559253.1

IPO4-208, Transcript of importin 4, humanhuman

TSL 4

Gene IPO4, Length 579 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IPO4-208ENST00000559253 A0A087WZG4 1122 aa21.55■■□□□ 1.04
IPO4-208ENST00000559253 SNRPA1P09661 255 aaKnown RBP21.55■■□□□ 1.04
IPO4-208ENST00000559253 COL15A1P39059 1388 aa21.55■■□□□ 1.04
IPO4-208ENST00000559253 ZPR1O75312 459 aa21.54■■□□□ 1.04
IPO4-208ENST00000559253 EIF5P55010 431 aaKnown RBP21.54■■□□□ 1.04
IPO4-208ENST00000559253 KLHL34Q8N239 644 aa21.54■■□□□ 1.04
IPO4-208ENST00000559253 BABAM1Q9NWV8 329 aa21.54■■□□□ 1.04
IPO4-208ENST00000559253 NARFQ9UHQ1 456 aa21.54■■□□□ 1.04
IPO4-208ENST00000559253 IL6STP40189 918 aaPredicted RBP21.53■■□□□ 1.04
IPO4-208ENST00000559253 NLGN2Q8NFZ4 835 aa21.53■■□□□ 1.04
IPO4-208ENST00000559253 RUNDC1Q96C34 613 aa21.53■■□□□ 1.04
IPO4-208ENST00000559253 UTRNP46939 3433 aa21.52■■□□□ 1.04
IPO4-208ENST00000559253 KCNQ3O43525 872 aa21.52■■□□□ 1.04
IPO4-208ENST00000559253 TMPOP42166 694 aaKnown RBP21.52■■□□□ 1.04
IPO4-208ENST00000559253 DLG5Q8TDM6 1919 aa21.52■■□□□ 1.04
IPO4-208ENST00000559253 RIPK4P57078 832 aa21.51■■□□□ 1.03
IPO4-208ENST00000559253 PARP3Q9Y6F1 533 aa21.51■■□□□ 1.03
IPO4-208ENST00000559253 C10orf71Q711Q0 1435 aa21.5■■□□□ 1.03
IPO4-208ENST00000559253 FKBP8Q14318 412 aa21.5■■□□□ 1.03
IPO4-208ENST00000559253 SRP68Q9UHB9 627 aaKnown RBP21.5■■□□□ 1.03
IPO4-208ENST00000559253 ADAMTS8Q9UP79 889 aa21.5■■□□□ 1.03
IPO4-208ENST00000559253 GRIN3BO60391 1043 aa21.49■■□□□ 1.03
IPO4-208ENST00000559253 CANXP27824 592 aaKnown RBP21.49■■□□□ 1.03
IPO4-208ENST00000559253 TM4SF1P30408 202 aa21.49■■□□□ 1.03
IPO4-208ENST00000559253 TGFB2P61812 414 aa21.49■■□□□ 1.03
IPO4-208ENST00000559253 GPR162Q16538 588 aa21.49■■□□□ 1.03
IPO4-208ENST00000559253 GOLGB1Q14789 3259 aaKnown RBP21.48■■□□□ 1.03
IPO4-208ENST00000559253 RGL2O15211 777 aa21.48■■□□□ 1.03
IPO4-208ENST00000559253 USPL1Q5W0Q7 1092 aa21.48■■□□□ 1.03
IPO4-208ENST00000559253 KDM3BQ7LBC6 1761 aa21.47■■□□□ 1.03
IPO4-208ENST00000559253 NPM2Q86SE8 214 aaKnown RBP21.47■■□□□ 1.03
IPO4-208ENST00000559253 KIF13BQ9NQT8 1826 aa21.47■■□□□ 1.03
IPO4-208ENST00000559253 USP16Q9Y5T5 823 aa21.46■■□□□ 1.03
IPO4-208ENST00000559253 A1BGP04217 495 aa21.45■■□□□ 1.02
IPO4-208ENST00000559253 EIF4A1P60842 406 aaKnown RBP21.45■■□□□ 1.02
IPO4-208ENST00000559253 POLRMTO00411 1230 aaKnown RBP21.44■■□□□ 1.02
IPO4-208ENST00000559253 GIGYF1O75420 1035 aaPredicted RBP21.44■■□□□ 1.02
IPO4-208ENST00000559253 DDR1Q08345 913 aa21.44■■□□□ 1.02
IPO4-208ENST00000559253 THUMPD2Q9BTF0 503 aaKnown RBP21.44■■□□□ 1.02
IPO4-208ENST00000559253 BCL2L12Q9HB09 334 aa21.44■■□□□ 1.02
IPO4-208ENST00000559253 MIS18AQ9NYP9 233 aa21.44■■□□□ 1.02
IPO4-208ENST00000559253 ANP32CO43423 234 aa21.43■■□□□ 1.02
IPO4-208ENST00000559253 YY1P25490 414 aa21.43■■□□□ 1.02
IPO4-208ENST00000559253 CCDC146Q8IYE0 955 aa21.43■■□□□ 1.02
IPO4-208ENST00000559253 PXDNLA1KZ92 1463 aa21.42■■□□□ 1.02
IPO4-208ENST00000559253 NFIXQ14938 502 aa21.42■■□□□ 1.02
IPO4-208ENST00000559253 TSPYL4Q9UJ04 414 aa21.42■■□□□ 1.02
IPO4-208ENST00000559253 TRIM35Q9UPQ4 493 aa21.42■■□□□ 1.02
IPO4-208ENST00000559253 ERBB4Q15303 1308 aa21.41■■□□□ 1.02
IPO4-208ENST00000559253 PRAMEF22A3QJZ6 481 aa21.41■■□□□ 1.02
IPO4-208ENST00000559253 YBX3P16989 372 aaKnown RBP eCLIP21.41■■□□□ 1.02
IPO4-208ENST00000559253 CLEC4GQ6UXB4 293 aa21.41■■□□□ 1.02
IPO4-208ENST00000559253 SCN7AQ01118 1682 aa21.4■■□□□ 1.02
IPO4-208ENST00000559253 CAMTA2O94983 1202 aa21.4■■□□□ 1.02
IPO4-208ENST00000559253 LAMB4A4D0S4 1761 aa21.4■■□□□ 1.02
IPO4-208ENST00000559253 CHL1O00533 1208 aa21.39■■□□□ 1.01
IPO4-208ENST00000559253 DZIP3Q86Y13 1208 aaKnown RBP21.39■■□□□ 1.01
IPO4-208ENST00000559253 TBC1D2BQ9UPU7 963 aa21.39■■□□□ 1.01
IPO4-208ENST00000559253 RRP7AQ9Y3A4 280 aaKnown RBP21.39■■□□□ 1.01
IPO4-208ENST00000559253 NRXN2Q9P2S2 1712 aa21.38■■□□□ 1.01
IPO4-208ENST00000559253 NBPF26B4DH59 902 aa21.38■■□□□ 1.01
IPO4-208ENST00000559253 NBPF10Q6P3W6 841 aaKnown RBP21.38■■□□□ 1.01
IPO4-208ENST00000559253 PELP1Q8IZL8 1130 aaKnown RBP21.38■■□□□ 1.01
IPO4-208ENST00000559253 NBPF15Q8N660 670 aa21.38■■□□□ 1.01
IPO4-208ENST00000559253 ZNF652Q9Y2D9 606 aa21.38■■□□□ 1.01
IPO4-208ENST00000559253 KIAA1551Q9HCM1 1747 aa21.38■■□□□ 1.01
IPO4-208ENST00000559253 SERPINB2P05120 415 aa21.37■■□□□ 1.01
IPO4-208ENST00000559253 CALD1Q05682 793 aaKnown RBP21.37■■□□□ 1.01
IPO4-208ENST00000559253 NEUROD2Q15784 382 aa21.37■■□□□ 1.01
IPO4-208ENST00000559253 NCBP3Q53F19 620 aaKnown RBP21.37■■□□□ 1.01
IPO4-208ENST00000559253 ZNF330Q9Y3S2 320 aaPredicted RBP21.37■■□□□ 1.01
IPO4-208ENST00000559253 CARMIL3Q8ND23 1372 aa21.36■■□□□ 1.01
IPO4-208ENST00000559253 CHD4Q14839 1912 aa21.36■■□□□ 1.01
IPO4-208ENST00000559253 CFAP44Q96MT7 982 aa21.35■■□□□ 1.01
IPO4-208ENST00000559253 PDZRN3Q9UPQ7 1066 aa21.35■■□□□ 1.01
IPO4-208ENST00000559253 BCORQ6W2J9 1755 aa21.34■■□□□ 1.01
IPO4-208ENST00000559253 A0A0G2JLW4 131 aa21.34■■□□□ 1.01
IPO4-208ENST00000559253 APAF1O14727 1248 aa21.34■■□□□ 1.01
IPO4-208ENST00000559253 DPEP1P16444 411 aa21.34■■□□□ 1.01
IPO4-208ENST00000559253 KCNA3P22001 575 aa21.34■■□□□ 1.01
IPO4-208ENST00000559253 TBC1D9BQ66K14 1250 aa21.34■■□□□ 1.01
IPO4-208ENST00000559253 SETDB2Q96T68 719 aa21.34■■□□□ 1.01
IPO4-208ENST00000559253 ERVV-1B6SEH8 477 aa21.33■■□□□ 1.01
IPO4-208ENST00000559253 HOXB7P09629 217 aa21.33■■□□□ 1.01
IPO4-208ENST00000559253 PIM2Q9P1W9 311 aa21.33■■□□□ 1.01
IPO4-208ENST00000559253 CCDC184Q52MB2 194 aa21.32■■□□□ 1
IPO4-208ENST00000559253 MRS2Q9HD23 443 aa21.32■■□□□ 1
IPO4-208ENST00000559253 PIP4K2AP48426 406 aaPredicted RBP21.31■■□□□ 1
IPO4-208ENST00000559253 CCDC27Q2M243 656 aa21.31■■□□□ 1
IPO4-208ENST00000559253 IFT57Q9NWB7 429 aa21.31■■□□□ 1
IPO4-208ENST00000559253 AFDNP55196 1824 aaKnown RBP21.3■■□□□ 1
IPO4-208ENST00000559253 ZNF853P0CG23 659 aa21.3■■□□□ 1
IPO4-208ENST00000559253 BRIP1Q9BX63 1249 aa21.3■■□□□ 1
IPO4-208ENST00000559253 BRCA1P38398 1863 aaKnown RBP21.29■■□□□ 1
IPO4-208ENST00000559253 DALRD3Q5D0E6 543 aaKnown RBP21.29■■□□□ 1
IPO4-208ENST00000559253 BICDL1Q6ZP65 573 aa21.29■■□□□ 1
IPO4-208ENST00000559253 N4BP2Q86UW6 1770 aaPredicted RBP21.28■■□□□ 1
IPO4-208ENST00000559253 PDE6BP35913 854 aa21.28■■□□□ 1
IPO4-208ENST00000559253 GNAI1P63096 354 aa21.28■■□□□ 1
IPO4-208ENST00000559253 PRR5LQ6MZQ0 368 aa21.28■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms