RNA–Protein interactions for RNA: ENST00000559201.5

LRRC49-215, Transcript of leucine rich repeat containing 49, human

TSL 3

Gene LRRC49, Length 938 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LRRC49-215	ENST00000559201	CASC1	Q6TDU7	716 aa		13.28	□□□□□ -0.28
LRRC49-215	ENST00000559201	PLEKHM2	Q8IWE5	1019 aa		13.28	□□□□□ -0.28
LRRC49-215	ENST00000559201	PI4KAP1	Q8N8J0	262 aa		13.28	□□□□□ -0.28
LRRC49-215	ENST00000559201	OSBPL3	Q9H4L5	887 aa		13.28	□□□□□ -0.28
LRRC49-215	ENST00000559201	CACNA1F	O60840	1977 aa		13.28	□□□□□ -0.28
LRRC49-215	ENST00000559201	KDM3B	Q7LBC6	1761 aa		13.27	□□□□□ -0.28
LRRC49-215	ENST00000559201	XIRP1	Q702N8	1843 aa	Known RBP	13.27	□□□□□ -0.28
LRRC49-215	ENST00000559201	CDC45	O75419	566 aa		13.27	□□□□□ -0.29
LRRC49-215	ENST00000559201	LINS1	Q8NG48	757 aa		13.27	□□□□□ -0.29
LRRC49-215	ENST00000559201	SSH3	Q8TE77	659 aa		13.27	□□□□□ -0.29
LRRC49-215	ENST00000559201	C22orf23	Q9BZE7	217 aa		13.27	□□□□□ -0.29
LRRC49-215	ENST00000559201	MEGF6	O75095	1541 aa		13.27	□□□□□ -0.29
LRRC49-215	ENST00000559201	KDM6A	O15550	1401 aa	Predicted RBP	13.26	□□□□□ -0.29
LRRC49-215	ENST00000559201	SEC24B	O95487	1268 aa		13.26	□□□□□ -0.29
LRRC49-215	ENST00000559201	MRC1	P22897	1456 aa		13.26	□□□□□ -0.29
LRRC49-215	ENST00000559201	NEXN	Q0ZGT2	675 aa		13.26	□□□□□ -0.29
LRRC49-215	ENST00000559201	TTC22	Q5TAA0	569 aa		13.26	□□□□□ -0.29
LRRC49-215	ENST00000559201	LRRCC1	Q9C099	1032 aa		13.26	□□□□□ -0.29
LRRC49-215	ENST00000559201	CRYBG1	Q9Y4K1	1723 aa		13.25	□□□□□ -0.29
LRRC49-215	ENST00000559201	COL5A2	P05997	1499 aa	Predicted RBP	13.25	□□□□□ -0.29
LRRC49-215	ENST00000559201	MTX1	Q13505	466 aa		13.25	□□□□□ -0.29
LRRC49-215	ENST00000559201	POLA2	Q14181	598 aa		13.25	□□□□□ -0.29
LRRC49-215	ENST00000559201	C9orf78	Q9NZ63	289 aa	Predicted RBP	13.25	□□□□□ -0.29
LRRC49-215	ENST00000559201	LRRFIP2	Q9Y608	721 aa	Known RBP	13.25	□□□□□ -0.29
LRRC49-215	ENST00000559201	AOX1	Q06278	1338 aa		13.24	□□□□□ -0.29
LRRC49-215	ENST00000559201	RBM25	P49756	843 aa	Known RBP	13.24	□□□□□ -0.29
LRRC49-215	ENST00000559201	PDIA6	Q15084	440 aa		13.24	□□□□□ -0.29
LRRC49-215	ENST00000559201	TEX13A	Q9BXU3	409 aa	Predicted RBP	13.24	□□□□□ -0.29
LRRC49-215	ENST00000559201	MAP3K2	Q9Y2U5	619 aa		13.24	□□□□□ -0.29
LRRC49-215	ENST00000559201	RGPD2	P0DJD1	1756 aa		13.24	□□□□□ -0.29
LRRC49-215	ENST00000559201	ADCY9	O60503	1353 aa		13.23	□□□□□ -0.29
LRRC49-215	ENST00000559201	UTY	O14607	1347 aa		13.23	□□□□□ -0.29
LRRC49-215	ENST00000559201	RIC3	Q7Z5B4	369 aa		13.23	□□□□□ -0.29
LRRC49-215	ENST00000559201	IL27	Q8NEV9	243 aa		13.23	□□□□□ -0.29
LRRC49-215	ENST00000559201	ZNF496	Q96IT1	587 aa	Predicted RBP	13.23	□□□□□ -0.29
LRRC49-215	ENST00000559201	CDCA7	Q9BWT1	371 aa	Predicted RBP	13.23	□□□□□ -0.29
LRRC49-215	ENST00000559201	USP35	Q9P2H5	1018 aa		13.23	□□□□□ -0.29
LRRC49-215	ENST00000559201	STAP2	Q9UGK3	403 aa		13.23	□□□□□ -0.29
LRRC49-215	ENST00000559201	MFAP1	P55081	439 aa	Known RBP	13.22	□□□□□ -0.29
LRRC49-215	ENST00000559201	ERC1	Q8IUD2	1116 aa		13.22	□□□□□ -0.29
LRRC49-215	ENST00000559201	KIF1BP	Q96EK5	621 aa		13.22	□□□□□ -0.29
LRRC49-215	ENST00000559201	NHSL1	Q5SYE7	1610 aa		13.21	□□□□□ -0.29
LRRC49-215	ENST00000559201	SLC39A6	Q13433	755 aa		13.21	□□□□□ -0.29
LRRC49-215	ENST00000559201	ANKRD13D	Q6ZTN6	518 aa		13.21	□□□□□ -0.29
LRRC49-215	ENST00000559201	PPP1R42	Q7Z4L9	355 aa		13.21	□□□□□ -0.29
LRRC49-215	ENST00000559201	METTL22	Q9BUU2	404 aa	Predicted RBP	13.21	□□□□□ -0.29
LRRC49-215	ENST00000559201	STRN4	Q9NRL3	753 aa		13.21	□□□□□ -0.29
LRRC49-215	ENST00000559201	PKD1L3	Q7Z443	1732 aa		13.21	□□□□□ -0.3
LRRC49-215	ENST00000559201	PNMA6E	A0A0J9YXQ4	647 aa		13.2	□□□□□ -0.3
LRRC49-215	ENST00000559201	GRM8	O00222	908 aa		13.2	□□□□□ -0.3
LRRC49-215	ENST00000559201	SRGAP3	O43295	1099 aa		13.2	□□□□□ -0.3
LRRC49-215	ENST00000559201	SURF6	O75683	361 aa	Known RBP	13.2	□□□□□ -0.3
LRRC49-215	ENST00000559201	PDE1A	P54750	535 aa		13.2	□□□□□ -0.3
LRRC49-215	ENST00000559201	TBC1D9	Q6ZT07	1266 aa		13.2	□□□□□ -0.3
LRRC49-215	ENST00000559201	EPB41L2	O43491	1005 aa	Known RBP	13.19	□□□□□ -0.3
LRRC49-215	ENST00000559201	NBPF7	P0C2Y1	421 aa	Predicted RBP	13.19	□□□□□ -0.3
LRRC49-215	ENST00000559201	COPS6	Q7L5N1	327 aa		13.19	□□□□□ -0.3
LRRC49-215	ENST00000559201	C16orf71	Q8IYS4	520 aa	Predicted RBP	13.19	□□□□□ -0.3
LRRC49-215	ENST00000559201	VSIG10	Q8N0Z9	540 aa		13.19	□□□□□ -0.3
LRRC49-215	ENST00000559201	XAGE3	Q8WTP9	111 aa		13.19	□□□□□ -0.3
LRRC49-215	ENST00000559201	SNX21	Q969T3	373 aa		13.19	□□□□□ -0.3
LRRC49-215	ENST00000559201	BTG4	Q9NY30	223 aa		13.19	□□□□□ -0.3
LRRC49-215	ENST00000559201	EXOC6B	Q9Y2D4	811 aa		13.19	□□□□□ -0.3
LRRC49-215	ENST00000559201	THRAP3	Q9Y2W1	955 aa	Known RBP	13.19	□□□□□ -0.3
LRRC49-215	ENST00000559201	SIPA1L3	O60292	1781 aa	Predicted RBP	13.19	□□□□□ -0.3
LRRC49-215	ENST00000559201	RGPD5	Q99666	1765 aa		13.19	□□□□□ -0.3
LRRC49-215	ENST00000559201	AHDC1	Q5TGY3	1603 aa	Predicted RBP	13.18	□□□□□ -0.3
LRRC49-215	ENST00000559201	TOM1	O60784	492 aa		13.18	□□□□□ -0.3
LRRC49-215	ENST00000559201	REC8	O95072	547 aa		13.18	□□□□□ -0.3
LRRC49-215	ENST00000559201	ANXA1	P04083	346 aa		13.18	□□□□□ -0.3
LRRC49-215	ENST00000559201	GSPT1	P15170	499 aa	Known RBP	13.18	□□□□□ -0.3
LRRC49-215	ENST00000559201	MX1	P20591	662 aa		13.18	□□□□□ -0.3
LRRC49-215	ENST00000559201	PROSER3	Q2NL68	480 aa		13.18	□□□□□ -0.3
LRRC49-215	ENST00000559201	PLBD2	Q8NHP8	589 aa		13.18	□□□□□ -0.3
LRRC49-215	ENST00000559201	DDX54	Q8TDD1	881 aa	Known RBP	13.18	□□□□□ -0.3
LRRC49-215	ENST00000559201	PARP4	Q9UKK3	1724 aa	Known RBP	13.18	□□□□□ -0.3
LRRC49-215	ENST00000559201	COL15A1	P39059	1388 aa		13.18	□□□□□ -0.3
LRRC49-215	ENST00000559201	VIRMA	Q69YN4	1812 aa	Known RBP	13.18	□□□□□ -0.3
LRRC49-215	ENST00000559201	SCN11A	Q9UI33	1791 aa		13.17	□□□□□ -0.3
LRRC49-215	ENST00000559201	SMARCA5	O60264	1052 aa	Predicted RBP	13.17	□□□□□ -0.3
LRRC49-215	ENST00000559201	SDS	P20132	328 aa		13.17	□□□□□ -0.3
LRRC49-215	ENST00000559201	AIMP1	Q12904	312 aa	Known RBP	13.17	□□□□□ -0.3
LRRC49-215	ENST00000559201	RHPN1	Q8TCX5	695 aa		13.17	□□□□□ -0.3
LRRC49-215	ENST00000559201	TMOD3	Q9NYL9	352 aa		13.17	□□□□□ -0.3
LRRC49-215	ENST00000559201	USP16	Q9Y5T5	823 aa		13.17	□□□□□ -0.3
LRRC49-215	ENST00000559201	N4BP2	Q86UW6	1770 aa	Predicted RBP	13.17	□□□□□ -0.3
LRRC49-215	ENST00000559201	SALL3	Q9BXA9	1300 aa		13.16	□□□□□ -0.3
LRRC49-215	ENST00000559201	PRAMEF22	A3QJZ6	481 aa		13.16	□□□□□ -0.3
LRRC49-215	ENST00000559201	NEURL1B	A8MQ27	555 aa		13.16	□□□□□ -0.3
LRRC49-215	ENST00000559201	APBB1	O00213	710 aa		13.16	□□□□□ -0.3
LRRC49-215	ENST00000559201	EXOC5	O00471	708 aa		13.16	□□□□□ -0.3
LRRC49-215	ENST00000559201	MYL6B	P14649	208 aa		13.16	□□□□□ -0.3
LRRC49-215	ENST00000559201	GCKR	Q14397	625 aa		13.16	□□□□□ -0.3
LRRC49-215	ENST00000559201	RTL5	Q5HYW3	569 aa	Predicted RBP	13.16	□□□□□ -0.3
LRRC49-215	ENST00000559201	LRP10	Q7Z4F1	713 aa		13.16	□□□□□ -0.3
LRRC49-215	ENST00000559201	GPATCH3	Q96I76	525 aa		13.16	□□□□□ -0.3
LRRC49-215	ENST00000559201	TTC41P	Q6P2S7	1318 aa		13.15	□□□□□ -0.3
LRRC49-215	ENST00000559201	ERC2	O15083	957 aa		13.15	□□□□□ -0.3
LRRC49-215	ENST00000559201	G3BP1	Q13283	466 aa	Known RBP eCLIP	13.15	□□□□□ -0.3
LRRC49-215	ENST00000559201	OS9	Q13438	667 aa	Predicted RBP	13.15	□□□□□ -0.3

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