RNA–Protein interactions for RNA: ENST00000559193.5

SPG11-215, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 2,579 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-215ENST00000559193 LRSAM1Q6UWE0 723 aa20.14■□□□□ 0.82
SPG11-215ENST00000559193 PI4K2BQ8TCG2 481 aa20.14■□□□□ 0.82
SPG11-215ENST00000559193 PDLIM2Q96JY6 352 aa20.14■□□□□ 0.82
SPG11-215ENST00000559193 SURF6O75683 361 aaKnown RBP20.14■□□□□ 0.81
SPG11-215ENST00000559193 SYCE3A1L190 88 aa20.13■□□□□ 0.81
SPG11-215ENST00000559193 EPB41L2O43491 1005 aaKnown RBP20.13■□□□□ 0.81
SPG11-215ENST00000559193 HSPA4P34932 840 aa20.13■□□□□ 0.81
SPG11-215ENST00000559193 RHPN1Q8TCX5 695 aa20.13■□□□□ 0.81
SPG11-215ENST00000559193 MBD3O95983 291 aa20.13■□□□□ 0.81
SPG11-215ENST00000559193 MAP4K4O95819 1239 aaPredicted RBP20.12■□□□□ 0.81
SPG11-215ENST00000559193 EIF4A1P60842 406 aaKnown RBP20.12■□□□□ 0.81
SPG11-215ENST00000559193 THEMISQ8N1K5 641 aaPredicted RBP20.12■□□□□ 0.81
SPG11-215ENST00000559193 LTN1O94822 1766 aa20.11■□□□□ 0.81
SPG11-215ENST00000559193 NBPF7P0C2Y1 421 aaPredicted RBP20.11■□□□□ 0.81
SPG11-215ENST00000559193 EIF2S2P20042 333 aaKnown RBP20.11■□□□□ 0.81
SPG11-215ENST00000559193 SRGAP3O43295 1099 aa20.1■□□□□ 0.81
SPG11-215ENST00000559193 CHPF2Q9P2E5 772 aa20.1■□□□□ 0.81
SPG11-215ENST00000559193 KDM3BQ7LBC6 1761 aa20.1■□□□□ 0.81
SPG11-215ENST00000559193 RAD50Q92878 1312 aa20.1■□□□□ 0.81
SPG11-215ENST00000559193 HS1BP3Q53T59 392 aa20.1■□□□□ 0.81
SPG11-215ENST00000559193 BEND3Q5T5X7 828 aa20.1■□□□□ 0.81
SPG11-215ENST00000559193 KIF1BPQ96EK5 621 aa20.1■□□□□ 0.81
SPG11-215ENST00000559193 LGR6Q9HBX8 967 aa20.1■□□□□ 0.81
SPG11-215ENST00000559193 SGSM2O43147 1006 aa20.09■□□□□ 0.81
SPG11-215ENST00000559193 C14orf37Q86TY3 774 aa20.09■□□□□ 0.81
SPG11-215ENST00000559193 NFAT5O94916 1531 aa20.09■□□□□ 0.81
SPG11-215ENST00000559193 NBPF6Q5VWK0 638 aa20.08■□□□□ 0.81
SPG11-215ENST00000559193 DNAAF4Q8WXU2 420 aa20.08■□□□□ 0.81
SPG11-215ENST00000559193 IP6K1Q92551 441 aa20.08■□□□□ 0.81
SPG11-215ENST00000559193 NBPF4Q96M43 638 aa20.08■□□□□ 0.81
SPG11-215ENST00000559193 CRYBG1Q9Y4K1 1723 aa20.08■□□□□ 0.81
SPG11-215ENST00000559193 KCNQ3O43525 872 aa20.08■□□□□ 0.8
SPG11-215ENST00000559193 PLEKHG5O94827 1062 aa20.08■□□□□ 0.8
SPG11-215ENST00000559193 HOXB7P09629 217 aa20.08■□□□□ 0.8
SPG11-215ENST00000559193 MSNP26038 577 aaKnown RBP20.08■□□□□ 0.8
SPG11-215ENST00000559193 PI4KAP2A4QPH2 592 aa20.07■□□□□ 0.8
SPG11-215ENST00000559193 PI4KAP1Q8N8J0 262 aa20.07■□□□□ 0.8
SPG11-215ENST00000559193 LSG1Q9H089 658 aaKnown RBP20.07■□□□□ 0.8
SPG11-215ENST00000559193 RPAP1Q9BWH6 1393 aaPredicted RBP20.07■□□□□ 0.8
SPG11-215ENST00000559193 SNX14Q9Y5W7 946 aa20.07■□□□□ 0.8
SPG11-215ENST00000559193 FER1L4A9Z1Z3 1794 aa20.07■□□□□ 0.8
SPG11-215ENST00000559193 ADCY9O60503 1353 aa20.06■□□□□ 0.8
SPG11-215ENST00000559193 CNTROBQ8N137 903 aa20.06■□□□□ 0.8
SPG11-215ENST00000559193 EIF2AK3Q9NZJ5 1116 aaKnown RBP20.06■□□□□ 0.8
SPG11-215ENST00000559193 NOL7Q9UMY1 257 aaKnown RBP20.06■□□□□ 0.8
SPG11-215ENST00000559193 PHF8Q9UPP1 1060 aa20.06■□□□□ 0.8
SPG11-215ENST00000559193 WDR33Q9C0J8 1336 aaKnown RBP20.05■□□□□ 0.8
SPG11-215ENST00000559193 ANXA1P04083 346 aa20.05■□□□□ 0.8
SPG11-215ENST00000559193 TTC14Q96N46 770 aa20.05■□□□□ 0.8
SPG11-215ENST00000559193 USP42Q9H9J4 1324 aaKnown RBP20.05■□□□□ 0.8
SPG11-215ENST00000559193 FOXD4L6Q3SYB3 417 aaPredicted RBP20.05■□□□□ 0.8
SPG11-215ENST00000559193 FOXD4L3Q6VB84 417 aaPredicted RBP20.05■□□□□ 0.8
SPG11-215ENST00000559193 GDPD2Q9HCC8 539 aa20.05■□□□□ 0.8
SPG11-215ENST00000559193 RASEFQ8IZ41 740 aa20.04■□□□□ 0.8
SPG11-215ENST00000559193 LMO7Q8WWI1 1683 aa20.04■□□□□ 0.8
SPG11-215ENST00000559193 GADD45BO75293 160 aaPredicted RBP20.04■□□□□ 0.8
SPG11-215ENST00000559193 OFD1O75665 1012 aa20.04■□□□□ 0.8
SPG11-215ENST00000559193 UBE2Q2Q8WVN8 375 aa20.03■□□□□ 0.8
SPG11-215ENST00000559193 RNF214Q8ND24 703 aa20.03■□□□□ 0.8
SPG11-215ENST00000559193 HSP90AB4PQ58FF6 505 aa20.02■□□□□ 0.8
SPG11-215ENST00000559193 KIAA1211Q6ZU35 1233 aa20.02■□□□□ 0.8
SPG11-215ENST00000559193 USP48Q86UV5 1035 aa20.02■□□□□ 0.8
SPG11-215ENST00000559193 TPM2P07951 284 aa20.02■□□□□ 0.8
SPG11-215ENST00000559193 AK2P54819 239 aa20.02■□□□□ 0.8
SPG11-215ENST00000559193 CWC27Q6UX04 472 aaKnown RBP20.02■□□□□ 0.8
SPG11-215ENST00000559193 SYAP1Q96A49 352 aaPredicted RBP20.01■□□□□ 0.79
SPG11-215ENST00000559193 TSPY26PQ9H489 355 aa20.01■□□□□ 0.79
SPG11-215ENST00000559193 RGPD2P0DJD1 1756 aa20.01■□□□□ 0.79
SPG11-215ENST00000559193 TTC41PQ6P2S7 1318 aa20.01■□□□□ 0.79
SPG11-215ENST00000559193 BTBD11A6QL63 1104 aa20.01■□□□□ 0.79
SPG11-215ENST00000559193 TEFQ10587 303 aa20.01■□□□□ 0.79
SPG11-215ENST00000559193 MTX1Q13505 466 aa20.01■□□□□ 0.79
SPG11-215ENST00000559193 ZNF530Q6P9A1 599 aaPredicted RBP20.01■□□□□ 0.79
SPG11-215ENST00000559193 RUFY3Q7L099 469 aa20.01■□□□□ 0.79
SPG11-215ENST00000559193 LRRC59Q96AG4 307 aaKnown RBP20.01■□□□□ 0.79
SPG11-215ENST00000559193 SPG7Q9UQ90 795 aa20.01■□□□□ 0.79
SPG11-215ENST00000559193 ZNF500O60304 480 aaPredicted RBP20■□□□□ 0.79
SPG11-215ENST00000559193 AKAP4Q5JQC9 854 aa20■□□□□ 0.79
SPG11-215ENST00000559193 GLRX3O76003 335 aaKnown RBP20■□□□□ 0.79
SPG11-215ENST00000559193 MPRIPQ6WCQ1 1025 aa20■□□□□ 0.79
SPG11-215ENST00000559193 TMEM87AQ8NBN3 555 aa20■□□□□ 0.79
SPG11-215ENST00000559193 CHMP4AQ9BY43 222 aa20■□□□□ 0.79
SPG11-215ENST00000559193 PXDNQ92626 1479 aa20■□□□□ 0.79
SPG11-215ENST00000559193 OS9Q13438 667 aaPredicted RBP19.99■□□□□ 0.79
SPG11-215ENST00000559193 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.99■□□□□ 0.79
SPG11-215ENST00000559193 LARP6Q9BRS8 491 aaKnown RBP19.99■□□□□ 0.79
SPG11-215ENST00000559193 ZKSCAN5Q9Y2L8 839 aa19.99■□□□□ 0.79
SPG11-215ENST00000559193 ZBTB7CA1YPR0 619 aa19.99■□□□□ 0.79
SPG11-215ENST00000559193 LIMCH1Q9UPQ0 1083 aa19.99■□□□□ 0.79
SPG11-215ENST00000559193 PHRF1Q9P1Y6 1649 aaKnown RBP19.99■□□□□ 0.79
SPG11-215ENST00000559193 ADGRL3Q9HAR2 1447 aa19.98■□□□□ 0.79
SPG11-215ENST00000559193 DBF4Q9UBU7 674 aaPredicted RBP19.98■□□□□ 0.79
SPG11-215ENST00000559193 RRP9O43818 475 aaKnown RBP19.97■□□□□ 0.79
SPG11-215ENST00000559193 ZSCAN22P10073 491 aaPredicted RBP19.97■□□□□ 0.79
SPG11-215ENST00000559193 CPA1P15085 419 aa19.97■□□□□ 0.79
SPG11-215ENST00000559193 PROSER3Q2NL68 480 aa19.97■□□□□ 0.79
SPG11-215ENST00000559193 DIAPH3Q9NSV4 1193 aa19.97■□□□□ 0.79
SPG11-215ENST00000559193 CNPY2Q9Y2B0 182 aa19.97■□□□□ 0.79
SPG11-215ENST00000559193 MAP3K2Q9Y2U5 619 aa19.97■□□□□ 0.79
SPG11-215ENST00000559193 PHF14O94880 888 aa19.96■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms