RNA–Protein interactions for RNA: ENST00000559152.5

CLPX-204, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 1 (best)

Gene CLPX, Length 2,228 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-204ENST00000559152 DCAF5Q96JK2 942 aa13.88□□□□□ -0.19
CLPX-204ENST00000559152 MX1P20591 662 aa13.88□□□□□ -0.19
CLPX-204ENST00000559152 POLA2Q14181 598 aa13.88□□□□□ -0.19
CLPX-204ENST00000559152 ZNF790Q6PG37 636 aa13.88□□□□□ -0.19
CLPX-204ENST00000559152 BCL11AQ9H165 835 aa13.88□□□□□ -0.19
CLPX-204ENST00000559152 DDX21Q9NR30 783 aaKnown RBP eCLIP13.88□□□□□ -0.19
CLPX-204ENST00000559152 STAP2Q9UGK3 403 aa13.88□□□□□ -0.19
CLPX-204ENST00000559152 COL18A1P39060 1754 aa13.88□□□□□ -0.19
CLPX-204ENST00000559152 ADCY9O60503 1353 aa13.87□□□□□ -0.19
CLPX-204ENST00000559152 SALL3Q9BXA9 1300 aa13.87□□□□□ -0.19
CLPX-204ENST00000559152 RABEP1Q15276 862 aa13.87□□□□□ -0.19
CLPX-204ENST00000559152 PPP1R42Q7Z4L9 355 aa13.87□□□□□ -0.19
CLPX-204ENST00000559152 KIF2CQ99661 725 aa13.87□□□□□ -0.19
CLPX-204ENST00000559152 USP26Q9BXU7 913 aa13.87□□□□□ -0.19
CLPX-204ENST00000559152 SIPA1L3O60292 1781 aaPredicted RBP13.87□□□□□ -0.19
CLPX-204ENST00000559152 RGPD5Q99666 1765 aa13.86□□□□□ -0.19
CLPX-204ENST00000559152 ERC2O15083 957 aa13.86□□□□□ -0.19
CLPX-204ENST00000559152 BRINP3Q76B58 766 aa13.86□□□□□ -0.19
CLPX-204ENST00000559152 CABLES1Q8TDN4 633 aa13.86□□□□□ -0.19
CLPX-204ENST00000559152 CIZ1Q9ULV3 898 aaPredicted RBP13.86□□□□□ -0.19
CLPX-204ENST00000559152 MAP3K2Q9Y2U5 619 aa13.86□□□□□ -0.19
CLPX-204ENST00000559152 SRGAP3O43295 1099 aa13.86□□□□□ -0.19
CLPX-204ENST00000559152 SURF6O75683 361 aaKnown RBP13.86□□□□□ -0.19
CLPX-204ENST00000559152 GSE1Q14687 1217 aa13.86□□□□□ -0.19
CLPX-204ENST00000559152 KIF1BPQ96EK5 621 aa13.86□□□□□ -0.19
CLPX-204ENST00000559152 NBPF7P0C2Y1 421 aaPredicted RBP13.85□□□□□ -0.19
CLPX-204ENST00000559152 MTX1Q13505 466 aa13.85□□□□□ -0.19
CLPX-204ENST00000559152 C9orf78Q9NZ63 289 aaPredicted RBP13.85□□□□□ -0.19
CLPX-204ENST00000559152 KDM6AO15550 1401 aaPredicted RBP13.85□□□□□ -0.19
CLPX-204ENST00000559152 MEGF6O75095 1541 aa13.85□□□□□ -0.19
CLPX-204ENST00000559152 K7ELQ4 463 aaPredicted RBP13.84□□□□□ -0.19
CLPX-204ENST00000559152 TTC5Q8N0Z6 440 aa13.84□□□□□ -0.19
CLPX-204ENST00000559152 LINS1Q8NG48 757 aa13.84□□□□□ -0.19
CLPX-204ENST00000559152 CHRNA2Q15822 529 aa13.84□□□□□ -0.19
CLPX-204ENST00000559152 NFATC2IPQ8NCF5 419 aa13.84□□□□□ -0.19
CLPX-204ENST00000559152 SLAIN2Q9P270 581 aa13.84□□□□□ -0.19
CLPX-204ENST00000559152 SOS2Q07890 1332 aaPredicted RBP13.83□□□□□ -0.19
CLPX-204ENST00000559152 ANXA1P04083 346 aa13.83□□□□□ -0.2
CLPX-204ENST00000559152 MRC1P22897 1456 aa13.83□□□□□ -0.2
CLPX-204ENST00000559152 CRYBG1Q9Y4K1 1723 aa13.83□□□□□ -0.2
CLPX-204ENST00000559152 EPB41L2O43491 1005 aaKnown RBP13.83□□□□□ -0.2
CLPX-204ENST00000559152 HSP90AA1P07900 732 aaKnown RBP13.83□□□□□ -0.2
CLPX-204ENST00000559152 SNRPA1P09661 255 aaKnown RBP13.83□□□□□ -0.2
CLPX-204ENST00000559152 LARP1Q6PKG0 1096 aaKnown RBP13.83□□□□□ -0.2
CLPX-204ENST00000559152 ERC1Q8IUD2 1116 aa13.83□□□□□ -0.2
CLPX-204ENST00000559152 SPRYD3Q8NCJ5 442 aa13.83□□□□□ -0.2
CLPX-204ENST00000559152 IL27Q8NEV9 243 aa13.83□□□□□ -0.2
CLPX-204ENST00000559152 RHPN1Q8TCX5 695 aa13.83□□□□□ -0.2
CLPX-204ENST00000559152 SCN11AQ9UI33 1791 aa13.83□□□□□ -0.2
CLPX-204ENST00000559152 NEXNQ0ZGT2 675 aa13.82□□□□□ -0.2
CLPX-204ENST00000559152 FMNL2Q96PY5 1086 aa13.82□□□□□ -0.2
CLPX-204ENST00000559152 PRDM11Q9NQV5 511 aa13.82□□□□□ -0.2
CLPX-204ENST00000559152 UTYO14607 1347 aa13.82□□□□□ -0.2
CLPX-204ENST00000559152 WDR17Q8IZU2 1322 aa13.82□□□□□ -0.2
CLPX-204ENST00000559152 CABP4P57796 275 aa13.82□□□□□ -0.2
CLPX-204ENST00000559152 PROSER3Q2NL68 480 aa13.82□□□□□ -0.2
CLPX-204ENST00000559152 TRIM6-TRIM34B2RNG4 842 aa13.81□□□□□ -0.2
CLPX-204ENST00000559152 CYP27B1O15528 508 aa13.81□□□□□ -0.2
CLPX-204ENST00000559152 ST18O60284 1047 aa13.81□□□□□ -0.2
CLPX-204ENST00000559152 MCCP23508 829 aa13.81□□□□□ -0.2
CLPX-204ENST00000559152 DDIT3P35638 169 aa13.81□□□□□ -0.2
CLPX-204ENST00000559152 PDIA6Q15084 440 aa13.81□□□□□ -0.2
CLPX-204ENST00000559152 RIC3Q7Z5B4 369 aa13.81□□□□□ -0.2
CLPX-204ENST00000559152 PKD1L3Q7Z443 1732 aa13.81□□□□□ -0.2
CLPX-204ENST00000559152 GRM8O00222 908 aa13.8□□□□□ -0.2
CLPX-204ENST00000559152 SLC39A6Q13433 755 aa13.8□□□□□ -0.2
CLPX-204ENST00000559152 PCDH11XQ9BZA7 1347 aa13.8□□□□□ -0.2
CLPX-204ENST00000559152 PCDH11YQ9BZA8 1340 aa13.8□□□□□ -0.2
CLPX-204ENST00000559152 PRAMEF22A3QJZ6 481 aa13.8□□□□□ -0.2
CLPX-204ENST00000559152 ESYT1Q9BSJ8 1104 aa13.8□□□□□ -0.2
CLPX-204ENST00000559152 OS9Q13438 667 aaPredicted RBP13.79□□□□□ -0.2
CLPX-204ENST00000559152 TOM1L2Q6ZVM7 507 aa13.79□□□□□ -0.2
CLPX-204ENST00000559152 RILPL2Q969X0 211 aa13.79□□□□□ -0.2
CLPX-204ENST00000559152 ZNF496Q96IT1 587 aaPredicted RBP13.79□□□□□ -0.2
CLPX-204ENST00000559152 IL1RAPL2Q9NP60 686 aa13.79□□□□□ -0.2
CLPX-204ENST00000559152 TTC41PQ6P2S7 1318 aa13.79□□□□□ -0.2
CLPX-204ENST00000559152 CLASRPQ8N2M8 674 aaKnown RBP13.79□□□□□ -0.2
CLPX-204ENST00000559152 CHMLP26374 656 aa13.78□□□□□ -0.2
CLPX-204ENST00000559152 MCM4P33991 863 aa13.78□□□□□ -0.2
CLPX-204ENST00000559152 AIMP1Q12904 312 aaKnown RBP13.78□□□□□ -0.2
CLPX-204ENST00000559152 ZCRB1Q8TBF4 217 aaKnown RBP13.78□□□□□ -0.2
CLPX-204ENST00000559152 GPATCH3Q96I76 525 aa13.78□□□□□ -0.2
CLPX-204ENST00000559152 ERBB4Q15303 1308 aa13.78□□□□□ -0.2
CLPX-204ENST00000559152 USP42Q9H9J4 1324 aaKnown RBP13.78□□□□□ -0.2
CLPX-204ENST00000559152 DDX11L8A8MPP1 907 aa13.78□□□□□ -0.2
CLPX-204ENST00000559152 ERVV-2B6SEH9 535 aa13.78□□□□□ -0.2
CLPX-204ENST00000559152 PTMSP20962 102 aa13.78□□□□□ -0.2
CLPX-204ENST00000559152 ANAPC15P60006 121 aa13.78□□□□□ -0.2
CLPX-204ENST00000559152 CWF19L2Q2TBE0 894 aaKnown RBP13.78□□□□□ -0.2
CLPX-204ENST00000559152 CNTROBQ8N137 903 aa13.78□□□□□ -0.2
CLPX-204ENST00000559152 RBM42Q9BTD8 480 aaKnown RBP13.78□□□□□ -0.2
CLPX-204ENST00000559152 ANKRD13DQ6ZTN6 518 aa13.77□□□□□ -0.21
CLPX-204ENST00000559152 METTL22Q9BUU2 404 aaPredicted RBP13.77□□□□□ -0.21
CLPX-204ENST00000559152 CARD10Q9BWT7 1032 aa13.77□□□□□ -0.21
CLPX-204ENST00000559152 PARP4Q9UKK3 1724 aaKnown RBP13.77□□□□□ -0.21
CLPX-204ENST00000559152 GLRX3O76003 335 aaKnown RBP13.76□□□□□ -0.21
CLPX-204ENST00000559152 MCM2P49736 904 aa13.76□□□□□ -0.21
CLPX-204ENST00000559152 TSHZ3Q63HK5 1081 aa13.76□□□□□ -0.21
CLPX-204ENST00000559152 COPS6Q7L5N1 327 aa13.76□□□□□ -0.21
CLPX-204ENST00000559152 NUTM1Q86Y26 1132 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms