RNA–Protein interactions for RNA: ENST00000558937.1

SMAD6-203, Transcript of SMAD family member 6, humanhuman

TSL 5

Gene SMAD6, Length 632 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-203ENST00000558937 USPL1Q5W0Q7 1092 aa20.16■□□□□ 0.82
SMAD6-203ENST00000558937 ZPR1O75312 459 aa20.15■□□□□ 0.82
SMAD6-203ENST00000558937 A0A0G2JLW4 131 aa20.14■□□□□ 0.81
SMAD6-203ENST00000558937 CANXP27824 592 aaKnown RBP20.14■□□□□ 0.81
SMAD6-203ENST00000558937 NARFQ9UHQ1 456 aa20.14■□□□□ 0.81
SMAD6-203ENST00000558937 KCNQ3O43525 872 aa20.13■□□□□ 0.81
SMAD6-203ENST00000558937 STARD3NLO95772 234 aa20.13■□□□□ 0.81
SMAD6-203ENST00000558937 DPEP1P16444 411 aa20.13■□□□□ 0.81
SMAD6-203ENST00000558937 FMNL2Q96PY5 1086 aa20.13■□□□□ 0.81
SMAD6-203ENST00000558937 AFDNP55196 1824 aaKnown RBP20.13■□□□□ 0.81
SMAD6-203ENST00000558937 DLG5Q8TDM6 1919 aa20.12■□□□□ 0.81
SMAD6-203ENST00000558937 BTBD11A6QL63 1104 aa20.12■□□□□ 0.81
SMAD6-203ENST00000558937 POLRMTO00411 1230 aaKnown RBP20.12■□□□□ 0.81
SMAD6-203ENST00000558937 TM4SF1P30408 202 aa20.12■□□□□ 0.81
SMAD6-203ENST00000558937 MCM10Q7L590 875 aa20.12■□□□□ 0.81
SMAD6-203ENST00000558937 RTF1Q92541 710 aaKnown RBP20.12■□□□□ 0.81
SMAD6-203ENST00000558937 SCN7AQ01118 1682 aa20.12■□□□□ 0.81
SMAD6-203ENST00000558937 ATP10DQ9P241 1426 aa20.11■□□□□ 0.81
SMAD6-203ENST00000558937 ADCY9O60503 1353 aa20.11■□□□□ 0.81
SMAD6-203ENST00000558937 NRXN2Q9P2S2 1712 aa20.11■□□□□ 0.81
SMAD6-203ENST00000558937 EIF5P55010 431 aaKnown RBP20.11■□□□□ 0.81
SMAD6-203ENST00000558937 TEX13AQ9BXU3 409 aaPredicted RBP20.11■□□□□ 0.81
SMAD6-203ENST00000558937 BCL2L12Q9HB09 334 aa20.11■□□□□ 0.81
SMAD6-203ENST00000558937 DCTN1Q14203 1278 aa20.1■□□□□ 0.81
SMAD6-203ENST00000558937 NFIXQ14938 502 aa20.1■□□□□ 0.81
SMAD6-203ENST00000558937 BCS1LQ9Y276 419 aa20.1■□□□□ 0.81
SMAD6-203ENST00000558937 ARFGEF1Q9Y6D6 1849 aa20.09■□□□□ 0.81
SMAD6-203ENST00000558937 HTATSF1O43719 755 aaKnown RBP20.09■□□□□ 0.81
SMAD6-203ENST00000558937 GOLGB1Q14789 3259 aaKnown RBP20.08■□□□□ 0.81
SMAD6-203ENST00000558937 A0A087WZG4 1122 aa20.08■□□□□ 0.81
SMAD6-203ENST00000558937 KCNA3P22001 575 aa20.08■□□□□ 0.81
SMAD6-203ENST00000558937 GIGYF1O75420 1035 aaPredicted RBP20.06■□□□□ 0.8
SMAD6-203ENST00000558937 A1BGP04217 495 aa20.06■□□□□ 0.8
SMAD6-203ENST00000558937 NEFMP07197 916 aa20.06■□□□□ 0.8
SMAD6-203ENST00000558937 IL6STP40189 918 aaPredicted RBP20.06■□□□□ 0.8
SMAD6-203ENST00000558937 ZNF330Q9Y3S2 320 aaPredicted RBP20.06■□□□□ 0.8
SMAD6-203ENST00000558937 BCORQ6W2J9 1755 aa20.06■□□□□ 0.8
SMAD6-203ENST00000558937 CHRNA5P30532 468 aa20.05■□□□□ 0.8
SMAD6-203ENST00000558937 DDX10Q13206 875 aaKnown RBP20.05■□□□□ 0.8
SMAD6-203ENST00000558937 RALBP1Q15311 655 aa20.05■□□□□ 0.8
SMAD6-203ENST00000558937 PLEKHF1Q96S99 279 aa20.05■□□□□ 0.8
SMAD6-203ENST00000558937 KDM3BQ7LBC6 1761 aa20.05■□□□□ 0.8
SMAD6-203ENST00000558937 PRAMEF22A3QJZ6 481 aa20.04■□□□□ 0.8
SMAD6-203ENST00000558937 SERPINB2P05120 415 aa20.04■□□□□ 0.8
SMAD6-203ENST00000558937 PIM2Q9P1W9 311 aa20.04■□□□□ 0.8
SMAD6-203ENST00000558937 USP16Q9Y5T5 823 aa20.04■□□□□ 0.8
SMAD6-203ENST00000558937 LAMB4A4D0S4 1761 aa20.03■□□□□ 0.8
SMAD6-203ENST00000558937 DLEC1Q9Y238 1755 aa20.03■□□□□ 0.8
SMAD6-203ENST00000558937 C1QTNF8P60827 252 aa20.03■□□□□ 0.8
SMAD6-203ENST00000558937 BICDL1Q6ZP65 573 aa20.03■□□□□ 0.8
SMAD6-203ENST00000558937 TBC1D2BQ9UPU7 963 aa20.03■□□□□ 0.8
SMAD6-203ENST00000558937 SNRPA1P09661 255 aaKnown RBP20.02■□□□□ 0.8
SMAD6-203ENST00000558937 TAF7Q15545 349 aaPredicted RBP20.02■□□□□ 0.8
SMAD6-203ENST00000558937 NFE2L2Q16236 605 aa20.02■□□□□ 0.8
SMAD6-203ENST00000558937 ARHGAP27Q6ZUM4 889 aa20.02■□□□□ 0.8
SMAD6-203ENST00000558937 CARMIL3Q8ND23 1372 aa20.02■□□□□ 0.8
SMAD6-203ENST00000558937 MAPK8IP3Q9UPT6 1336 aa20.02■□□□□ 0.79
SMAD6-203ENST00000558937 PIP4K2AP48426 406 aaPredicted RBP20.01■□□□□ 0.79
SMAD6-203ENST00000558937 DALRD3Q5D0E6 543 aaKnown RBP20.01■□□□□ 0.79
SMAD6-203ENST00000558937 TBC1D9BQ66K14 1250 aa20.01■□□□□ 0.79
SMAD6-203ENST00000558937 ANKRD31Q8N7Z5 1873 aa20.01■□□□□ 0.79
SMAD6-203ENST00000558937 CAMTA2O94983 1202 aa20■□□□□ 0.79
SMAD6-203ENST00000558937 NPM2Q86SE8 214 aaKnown RBP20■□□□□ 0.79
SMAD6-203ENST00000558937 ZNF526Q8TF50 670 aaPredicted RBP20■□□□□ 0.79
SMAD6-203ENST00000558937 PNNQ9H307 717 aaKnown RBP20■□□□□ 0.79
SMAD6-203ENST00000558937 GPBP1L1Q9HC44 474 aaPredicted RBP20■□□□□ 0.79
SMAD6-203ENST00000558937 MIS18AQ9NYP9 233 aa20■□□□□ 0.79
SMAD6-203ENST00000558937 THUMPD2Q9BTF0 503 aaKnown RBP19.99■□□□□ 0.79
SMAD6-203ENST00000558937 MYBBP1AQ9BQG0 1328 aaKnown RBP19.99■□□□□ 0.79
SMAD6-203ENST00000558937 DZIP3Q86Y13 1208 aaKnown RBP19.98■□□□□ 0.79
SMAD6-203ENST00000558937 PNISRQ8TF01 805 aaKnown RBP19.97■□□□□ 0.79
SMAD6-203ENST00000558937 COL11A2P13942 1736 aaPredicted RBP19.96■□□□□ 0.79
SMAD6-203ENST00000558937 NBPF26B4DH59 902 aa19.96■□□□□ 0.79
SMAD6-203ENST00000558937 NBPF10Q6P3W6 841 aaKnown RBP19.96■□□□□ 0.79
SMAD6-203ENST00000558937 NBPF15Q8N660 670 aa19.96■□□□□ 0.79
SMAD6-203ENST00000558937 PRR5LQ6MZQ0 368 aa19.95■□□□□ 0.78
SMAD6-203ENST00000558937 C2CD5Q86YS7 1000 aa19.95■□□□□ 0.78
SMAD6-203ENST00000558937 SENP3-EIF4A1A0A087X0R7 540 aa19.94■□□□□ 0.78
SMAD6-203ENST00000558937 SBF1O95248 1867 aa19.93■□□□□ 0.78
SMAD6-203ENST00000558937 EIF4A1P60842 406 aaKnown RBP19.93■□□□□ 0.78
SMAD6-203ENST00000558937 C9orf131Q5VYM1 1079 aa19.93■□□□□ 0.78
SMAD6-203ENST00000558937 CCDC24Q8N4L8 307 aa19.93■□□□□ 0.78
SMAD6-203ENST00000558937 SETDB2Q96T68 719 aa19.93■□□□□ 0.78
SMAD6-203ENST00000558937 H0YIN7 160 aa19.92■□□□□ 0.78
SMAD6-203ENST00000558937 CNBD1Q8NA66 436 aa19.92■□□□□ 0.78
SMAD6-203ENST00000558937 RIPK4P57078 832 aa19.91■□□□□ 0.78
SMAD6-203ENST00000558937 TTLL6Q8N841 843 aa19.91■□□□□ 0.78
SMAD6-203ENST00000558937 BRIP1Q9BX63 1249 aa19.91■□□□□ 0.78
SMAD6-203ENST00000558937 ZNF652Q9Y2D9 606 aa19.91■□□□□ 0.78
SMAD6-203ENST00000558937 TMPOP42166 694 aaKnown RBP19.9■□□□□ 0.78
SMAD6-203ENST00000558937 CLEC4GQ6UXB4 293 aa19.9■□□□□ 0.78
SMAD6-203ENST00000558937 KIF3CO14782 793 aa19.89■□□□□ 0.77
SMAD6-203ENST00000558937 NPHP1O15259 732 aa19.89■□□□□ 0.77
SMAD6-203ENST00000558937 PDE6BP35913 854 aa19.89■□□□□ 0.77
SMAD6-203ENST00000558937 RASSF7Q02833 373 aa19.89■□□□□ 0.77
SMAD6-203ENST00000558937 CCDC146Q8IYE0 955 aa19.89■□□□□ 0.77
SMAD6-203ENST00000558937 RNF181Q9P0P0 153 aa19.89■□□□□ 0.77
SMAD6-203ENST00000558937 PDZRN3Q9UPQ7 1066 aa19.89■□□□□ 0.77
SMAD6-203ENST00000558937 CACNA1SQ13698 1873 aa19.88■□□□□ 0.77
SMAD6-203ENST00000558937 RGL2O15211 777 aa19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms