RNA–Protein interactions for RNA: ENST00000558894.5

SMAD3-209, Transcript of SMAD family member 3, humanhuman

TSL 5

Gene SMAD3, Length 797 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-209ENST00000558894 BCL2L12Q9HB09 334 aa7.51□□□□□ -1.21
SMAD3-209ENST00000558894 SRP68Q9UHB9 627 aaKnown RBP7.51□□□□□ -1.21
SMAD3-209ENST00000558894 COL11A2P13942 1736 aaPredicted RBP7.51□□□□□ -1.21
SMAD3-209ENST00000558894 SOS1Q07889 1333 aaPredicted RBP7.51□□□□□ -1.21
SMAD3-209ENST00000558894 VSIG10Q8N0Z9 540 aa7.5□□□□□ -1.21
SMAD3-209ENST00000558894 LAMB4A4D0S4 1761 aa7.5□□□□□ -1.21
SMAD3-209ENST00000558894 ATP10DQ9P241 1426 aa7.5□□□□□ -1.21
SMAD3-209ENST00000558894 ARFGEF2Q9Y6D5 1785 aa7.49□□□□□ -1.21
SMAD3-209ENST00000558894 A0A0G2JLW4 131 aa7.49□□□□□ -1.21
SMAD3-209ENST00000558894 RFC4P35249 363 aa7.49□□□□□ -1.21
SMAD3-209ENST00000558894 PRELPP51888 382 aa7.49□□□□□ -1.21
SMAD3-209ENST00000558894 TGFB2P61812 414 aa7.49□□□□□ -1.21
SMAD3-209ENST00000558894 CNGB1Q14028 1251 aaPredicted RBP7.49□□□□□ -1.21
SMAD3-209ENST00000558894 CCDC87Q9NVE4 849 aa7.49□□□□□ -1.21
SMAD3-209ENST00000558894 WWC3Q9ULE0 1092 aa7.49□□□□□ -1.21
SMAD3-209ENST00000558894 ZBTB1Q9Y2K1 713 aa7.49□□□□□ -1.21
SMAD3-209ENST00000558894 CACNA1SQ13698 1873 aa7.49□□□□□ -1.21
SMAD3-209ENST00000558894 COL15A1P39059 1388 aa7.48□□□□□ -1.21
SMAD3-209ENST00000558894 GNAT3A8MTJ3 354 aa7.48□□□□□ -1.21
SMAD3-209ENST00000558894 POLRMTO00411 1230 aaKnown RBP7.48□□□□□ -1.21
SMAD3-209ENST00000558894 U2SURPO15042 1029 aaKnown RBP7.48□□□□□ -1.21
SMAD3-209ENST00000558894 DPEP1P16444 411 aa7.48□□□□□ -1.21
SMAD3-209ENST00000558894 PRKAR2BP31323 418 aa7.48□□□□□ -1.21
SMAD3-209ENST00000558894 EIF5P55010 431 aaKnown RBP7.48□□□□□ -1.21
SMAD3-209ENST00000558894 USPL1Q5W0Q7 1092 aa7.48□□□□□ -1.21
SMAD3-209ENST00000558894 ZNF496Q96IT1 587 aaPredicted RBP7.48□□□□□ -1.21
SMAD3-209ENST00000558894 NARFQ9UHQ1 456 aa7.48□□□□□ -1.21
SMAD3-209ENST00000558894 HEG1Q9ULI3 1381 aa7.47□□□□□ -1.21
SMAD3-209ENST00000558894 FER1L6Q2WGJ9 1857 aa7.47□□□□□ -1.21
SMAD3-209ENST00000558894 DICER1Q9UPY3 1922 aaKnown RBP7.47□□□□□ -1.21
SMAD3-209ENST00000558894 KCNQ3O43525 872 aa7.47□□□□□ -1.21
SMAD3-209ENST00000558894 ZNF790Q6PG37 636 aa7.47□□□□□ -1.21
SMAD3-209ENST00000558894 NUP98P52948 1817 aa7.47□□□□□ -1.21
SMAD3-209ENST00000558894 CARMIL3Q8ND23 1372 aa7.46□□□□□ -1.21
SMAD3-209ENST00000558894 PCNTO95613 3336 aa7.46□□□□□ -1.21
SMAD3-209ENST00000558894 NFIXQ14938 502 aa7.46□□□□□ -1.22
SMAD3-209ENST00000558894 COL13A1Q5TAT6 717 aaPredicted RBP7.46□□□□□ -1.22
SMAD3-209ENST00000558894 GAS2L2Q8NHY3 880 aa7.46□□□□□ -1.22
SMAD3-209ENST00000558894 PARP3Q9Y6F1 533 aa7.46□□□□□ -1.22
SMAD3-209ENST00000558894 TIAM2Q8IVF5 1701 aa7.46□□□□□ -1.22
SMAD3-209ENST00000558894 PRAMEF22A3QJZ6 481 aa7.45□□□□□ -1.22
SMAD3-209ENST00000558894 FCHSD2O94868 740 aa7.45□□□□□ -1.22
SMAD3-209ENST00000558894 CHRNA5P30532 468 aa7.45□□□□□ -1.22
SMAD3-209ENST00000558894 PLEKHF1Q96S99 279 aa7.45□□□□□ -1.22
SMAD3-209ENST00000558894 SLX4Q8IY92 1834 aa7.45□□□□□ -1.22
SMAD3-209ENST00000558894 TNRC6CQ9HCJ0 1690 aaKnown RBP7.44□□□□□ -1.22
SMAD3-209ENST00000558894 KIF3CO14782 793 aa7.44□□□□□ -1.22
SMAD3-209ENST00000558894 GIGYF1O75420 1035 aaPredicted RBP7.44□□□□□ -1.22
SMAD3-209ENST00000558894 A1BGP04217 495 aa7.44□□□□□ -1.22
SMAD3-209ENST00000558894 CANXP27824 592 aaKnown RBP7.44□□□□□ -1.22
SMAD3-209ENST00000558894 TEFQ10587 303 aa7.44□□□□□ -1.22
SMAD3-209ENST00000558894 DCTN1Q14203 1278 aa7.44□□□□□ -1.22
SMAD3-209ENST00000558894 MCM10Q7L590 875 aa7.44□□□□□ -1.22
SMAD3-209ENST00000558894 CFAP53Q96M91 514 aa7.44□□□□□ -1.22
SMAD3-209ENST00000558894 BCS1LQ9Y276 419 aa7.44□□□□□ -1.22
SMAD3-209ENST00000558894 USP16Q9Y5T5 823 aa7.44□□□□□ -1.22
SMAD3-209ENST00000558894 BTBD11A6QL63 1104 aa7.43□□□□□ -1.22
SMAD3-209ENST00000558894 NBPF26B4DH59 902 aa7.43□□□□□ -1.22
SMAD3-209ENST00000558894 HTATSF1O43719 755 aaKnown RBP7.43□□□□□ -1.22
SMAD3-209ENST00000558894 ZPR1O75312 459 aa7.43□□□□□ -1.22
SMAD3-209ENST00000558894 SERPINB2P05120 415 aa7.43□□□□□ -1.22
SMAD3-209ENST00000558894 U2AF1L5P0DN76 240 aaPredicted RBP7.43□□□□□ -1.22
SMAD3-209ENST00000558894 IL6STP40189 918 aaPredicted RBP7.43□□□□□ -1.22
SMAD3-209ENST00000558894 U2AF1Q01081 240 aaKnown RBP eCLIP7.43□□□□□ -1.22
SMAD3-209ENST00000558894 TBC1D9BQ66K14 1250 aa7.43□□□□□ -1.22
SMAD3-209ENST00000558894 NBPF10Q6P3W6 841 aaKnown RBP7.43□□□□□ -1.22
SMAD3-209ENST00000558894 TTC5Q8N0Z6 440 aa7.43□□□□□ -1.22
SMAD3-209ENST00000558894 NBPF15Q8N660 670 aa7.43□□□□□ -1.22
SMAD3-209ENST00000558894 FMNL2Q96PY5 1086 aa7.43□□□□□ -1.22
SMAD3-209ENST00000558894 TEX13AQ9BXU3 409 aaPredicted RBP7.43□□□□□ -1.22
SMAD3-209ENST00000558894 PIM2Q9P1W9 311 aa7.43□□□□□ -1.22
SMAD3-209ENST00000558894 ANKRD36CQ5JPF3 1778 aa7.42□□□□□ -1.22
SMAD3-209ENST00000558894 CAMTA2O94983 1202 aa7.42□□□□□ -1.22
SMAD3-209ENST00000558894 STARD3NLO95772 234 aa7.42□□□□□ -1.22
SMAD3-209ENST00000558894 PIP4K2AP48426 406 aaPredicted RBP7.42□□□□□ -1.22
SMAD3-209ENST00000558894 GPBP1L1Q9HC44 474 aaPredicted RBP7.42□□□□□ -1.22
SMAD3-209ENST00000558894 TBC1D2BQ9UPU7 963 aa7.42□□□□□ -1.22
SMAD3-209ENST00000558894 NUDCQ9Y266 331 aa7.42□□□□□ -1.22
SMAD3-209ENST00000558894 WDR90Q96KV7 1748 aa7.41□□□□□ -1.22
SMAD3-209ENST00000558894 A0A087WZG4 1122 aa7.41□□□□□ -1.22
SMAD3-209ENST00000558894 DALRD3Q5D0E6 543 aaKnown RBP7.41□□□□□ -1.22
SMAD3-209ENST00000558894 PRR5LQ6MZQ0 368 aa7.41□□□□□ -1.22
SMAD3-209ENST00000558894 ARHGAP27Q6ZUM4 889 aa7.41□□□□□ -1.22
SMAD3-209ENST00000558894 ZNF526Q8TF50 670 aaPredicted RBP7.41□□□□□ -1.22
SMAD3-209ENST00000558894 MIS18AQ9NYP9 233 aa7.41□□□□□ -1.22
SMAD3-209ENST00000558894 LAMB2P55268 1798 aa7.41□□□□□ -1.22
SMAD3-209ENST00000558894 TAF7Q15545 349 aaPredicted RBP7.4□□□□□ -1.22
SMAD3-209ENST00000558894 BICDL1Q6ZP65 573 aa7.4□□□□□ -1.22
SMAD3-209ENST00000558894 SNRPA1P09661 255 aaKnown RBP7.39□□□□□ -1.23
SMAD3-209ENST00000558894 NFE2L2Q16236 605 aa7.39□□□□□ -1.23
SMAD3-209ENST00000558894 C9orf131Q5VYM1 1079 aa7.39□□□□□ -1.23
SMAD3-209ENST00000558894 C2CD5Q86YS7 1000 aa7.39□□□□□ -1.23
SMAD3-209ENST00000558894 CCDC24Q8N4L8 307 aa7.39□□□□□ -1.23
SMAD3-209ENST00000558894 THUMPD2Q9BTF0 503 aaKnown RBP7.39□□□□□ -1.23
SMAD3-209ENST00000558894 BRIP1Q9BX63 1249 aa7.39□□□□□ -1.23
SMAD3-209ENST00000558894 NMRK2Q9NPI5 230 aa7.39□□□□□ -1.23
SMAD3-209ENST00000558894 SNED1Q8TER0 1413 aa7.38□□□□□ -1.23
SMAD3-209ENST00000558894 KLRG2A4D1S0 409 aaPredicted RBP7.38□□□□□ -1.23
SMAD3-209ENST00000558894 NFKBIEO00221 500 aa7.38□□□□□ -1.23
SMAD3-209ENST00000558894 RGL2O15211 777 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms