RNA–Protein interactions for RNA: ENST00000558795.1

CPNE6-208, Transcript of copine 6, humanhuman

TSL 2

Gene CPNE6, Length 1,226 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6-208ENST00000558795 HTRA3P83110 453 aa20.84■□□□□ 0.93
CPNE6-208ENST00000558795 KLRG1Q96E93 195 aa20.84■□□□□ 0.93
CPNE6-208ENST00000558795 ZEB1P37275 1124 aaPredicted RBP20.83■□□□□ 0.93
CPNE6-208ENST00000558795 AFDNP55196 1824 aaKnown RBP20.83■□□□□ 0.92
CPNE6-208ENST00000558795 VIRMAQ69YN4 1812 aaKnown RBP20.83■□□□□ 0.92
CPNE6-208ENST00000558795 CYP19A1P11511 503 aaPredicted RBP20.82■□□□□ 0.92
CPNE6-208ENST00000558795 LGR6Q9HBX8 967 aa20.82■□□□□ 0.92
CPNE6-208ENST00000558795 NARFQ9UHQ1 456 aa20.82■□□□□ 0.92
CPNE6-208ENST00000558795 COL15A1P39059 1388 aa20.82■□□□□ 0.92
CPNE6-208ENST00000558795 MRC1P22897 1456 aa20.81■□□□□ 0.92
CPNE6-208ENST00000558795 ZC3H4Q9UPT8 1303 aaKnown RBP20.81■□□□□ 0.92
CPNE6-208ENST00000558795 RNMTO43148 476 aaKnown RBP20.81■□□□□ 0.92
CPNE6-208ENST00000558795 RASSF7Q02833 373 aa20.81■□□□□ 0.92
CPNE6-208ENST00000558795 SLC39A6Q13433 755 aa20.81■□□□□ 0.92
CPNE6-208ENST00000558795 NFIXQ14938 502 aa20.81■□□□□ 0.92
CPNE6-208ENST00000558795 SMC1BQ8NDV3 1235 aa20.81■□□□□ 0.92
CPNE6-208ENST00000558795 DLEC1Q9Y238 1755 aa20.8■□□□□ 0.92
CPNE6-208ENST00000558795 NRXN2Q9P2S2 1712 aa20.79■□□□□ 0.92
CPNE6-208ENST00000558795 HMOX1P09601 288 aa20.79■□□□□ 0.92
CPNE6-208ENST00000558795 JMYQ8N9B5 988 aa20.79■□□□□ 0.92
CPNE6-208ENST00000558795 ZBTB1Q9Y2K1 713 aa20.79■□□□□ 0.92
CPNE6-208ENST00000558795 SERPINB2P05120 415 aa20.78■□□□□ 0.92
CPNE6-208ENST00000558795 LMNB1P20700 586 aa20.78■□□□□ 0.92
CPNE6-208ENST00000558795 TTLL6Q8N841 843 aa20.78■□□□□ 0.92
CPNE6-208ENST00000558795 C2CD5Q86YS7 1000 aa20.76■□□□□ 0.91
CPNE6-208ENST00000558795 VSIG10Q8N0Z9 540 aa20.76■□□□□ 0.91
CPNE6-208ENST00000558795 GLTPD2A6NH11 291 aa20.75■□□□□ 0.91
CPNE6-208ENST00000558795 H0YIN7 160 aa20.75■□□□□ 0.91
CPNE6-208ENST00000558795 VEGFAP15692 232 aaPredicted RBP20.75■□□□□ 0.91
CPNE6-208ENST00000558795 CANXP27824 592 aaKnown RBP20.75■□□□□ 0.91
CPNE6-208ENST00000558795 AMER1Q5JTC6 1135 aaPredicted RBP20.75■□□□□ 0.91
CPNE6-208ENST00000558795 BCL2L12Q9HB09 334 aa20.75■□□□□ 0.91
CPNE6-208ENST00000558795 TIAM2Q8IVF5 1701 aa20.75■□□□□ 0.91
CPNE6-208ENST00000558795 MTHFSDQ2M296 383 aaKnown RBP20.74■□□□□ 0.91
CPNE6-208ENST00000558795 CCDC88AQ3V6T2 1871 aa20.74■□□□□ 0.91
CPNE6-208ENST00000558795 BICDL1Q6ZP65 573 aa20.74■□□□□ 0.91
CPNE6-208ENST00000558795 TTC5Q8N0Z6 440 aa20.74■□□□□ 0.91
CPNE6-208ENST00000558795 UBR2Q8IWV8 1755 aa20.74■□□□□ 0.91
CPNE6-208ENST00000558795 STARD3NLO95772 234 aa20.73■□□□□ 0.91
CPNE6-208ENST00000558795 A0A087WZG4 1122 aa20.72■□□□□ 0.91
CPNE6-208ENST00000558795 DIAPH1O60610 1272 aaKnown RBP20.72■□□□□ 0.91
CPNE6-208ENST00000558795 COL13A1Q5TAT6 717 aaPredicted RBP20.72■□□□□ 0.91
CPNE6-208ENST00000558795 CARMIL3Q8ND23 1372 aa20.72■□□□□ 0.91
CPNE6-208ENST00000558795 PRELPP51888 382 aa20.71■□□□□ 0.91
CPNE6-208ENST00000558795 NFKBIEO00221 500 aa20.69■□□□□ 0.9
CPNE6-208ENST00000558795 EIF5P55010 431 aaKnown RBP20.69■□□□□ 0.9
CPNE6-208ENST00000558795 DPY19L2Q6NUT2 758 aa20.69■□□□□ 0.9
CPNE6-208ENST00000558795 ZNF622Q969S3 477 aaKnown RBP eCLIP20.69■□□□□ 0.9
CPNE6-208ENST00000558795 ZNF330Q9Y3S2 320 aaPredicted RBP20.69■□□□□ 0.9
CPNE6-208ENST00000558795 PDE6BP35913 854 aa20.68■□□□□ 0.9
CPNE6-208ENST00000558795 TEFQ10587 303 aa20.68■□□□□ 0.9
CPNE6-208ENST00000558795 PDZRN3Q9UPQ7 1066 aa20.68■□□□□ 0.9
CPNE6-208ENST00000558795 SCN7AQ01118 1682 aa20.67■□□□□ 0.9
CPNE6-208ENST00000558795 ANKRD31Q8N7Z5 1873 aa20.67■□□□□ 0.9
CPNE6-208ENST00000558795 TBC1D9BQ66K14 1250 aa20.67■□□□□ 0.9
CPNE6-208ENST00000558795 TNS4Q8IZW8 715 aa20.67■□□□□ 0.9
CPNE6-208ENST00000558795 BRIP1Q9BX63 1249 aa20.67■□□□□ 0.9
CPNE6-208ENST00000558795 TEX13AQ9BXU3 409 aaPredicted RBP20.67■□□□□ 0.9
CPNE6-208ENST00000558795 ZNF219Q9P2Y4 722 aaPredicted RBP20.67■□□□□ 0.9
CPNE6-208ENST00000558795 CAPN15O75808 1086 aa20.66■□□□□ 0.9
CPNE6-208ENST00000558795 CC2D1BQ5T0F9 858 aaKnown RBP20.66■□□□□ 0.9
CPNE6-208ENST00000558795 NPM2Q86SE8 214 aaKnown RBP20.66■□□□□ 0.9
CPNE6-208ENST00000558795 ZNF496Q96IT1 587 aaPredicted RBP20.66■□□□□ 0.9
CPNE6-208ENST00000558795 KIF7Q2M1P5 1343 aa20.66■□□□□ 0.9
CPNE6-208ENST00000558795 HEG1Q9ULI3 1381 aa20.65■□□□□ 0.9
CPNE6-208ENST00000558795 NPHP1O15259 732 aa20.65■□□□□ 0.9
CPNE6-208ENST00000558795 C21orf2O43822 256 aa20.65■□□□□ 0.9
CPNE6-208ENST00000558795 ZNF790Q6PG37 636 aa20.65■□□□□ 0.9
CPNE6-208ENST00000558795 TBC1D2BQ9UPU7 963 aa20.65■□□□□ 0.9
CPNE6-208ENST00000558795 DICER1Q9UPY3 1922 aaKnown RBP20.65■□□□□ 0.9
CPNE6-208ENST00000558795 GNAT3A8MTJ3 354 aa20.64■□□□□ 0.89
CPNE6-208ENST00000558795 U2SURPO15042 1029 aaKnown RBP20.64■□□□□ 0.89
CPNE6-208ENST00000558795 ERFEQ4G0M1 354 aa20.64■□□□□ 0.89
CPNE6-208ENST00000558795 PRR5LQ6MZQ0 368 aa20.64■□□□□ 0.89
CPNE6-208ENST00000558795 COL11A2P13942 1736 aaPredicted RBP20.64■□□□□ 0.89
CPNE6-208ENST00000558795 FER1L6Q2WGJ9 1857 aa20.63■□□□□ 0.89
CPNE6-208ENST00000558795 IL6STP40189 918 aaPredicted RBP20.63■□□□□ 0.89
CPNE6-208ENST00000558795 CCDC24Q8N4L8 307 aa20.63■□□□□ 0.89
CPNE6-208ENST00000558795 GAS2L2Q8NHY3 880 aa20.63■□□□□ 0.89
CPNE6-208ENST00000558795 HSPA1AP0DMV8 641 aaKnown RBP20.62■□□□□ 0.89
CPNE6-208ENST00000558795 HSPA1BP0DMV9 641 aaKnown RBP20.62■□□□□ 0.89
CPNE6-208ENST00000558795 CNBD1Q8NA66 436 aa20.62■□□□□ 0.89
CPNE6-208ENST00000558795 FMNL2Q96PY5 1086 aa20.62■□□□□ 0.89
CPNE6-208ENST00000558795 SETDB2Q96T68 719 aa20.62■□□□□ 0.89
CPNE6-208ENST00000558795 SIPA1L3O60292 1781 aaPredicted RBP20.62■□□□□ 0.89
CPNE6-208ENST00000558795 POTECB2RU33 542 aa20.61■□□□□ 0.89
CPNE6-208ENST00000558795 IL17REQ8NFR9 667 aa20.61■□□□□ 0.89
CPNE6-208ENST00000558795 TAOK3Q9H2K8 898 aa20.61■□□□□ 0.89
CPNE6-208ENST00000558795 CACNA1SQ13698 1873 aa20.6■□□□□ 0.89
CPNE6-208ENST00000558795 PER1O15534 1290 aaPredicted RBP20.6■□□□□ 0.89
CPNE6-208ENST00000558795 ST5P78524 1137 aa20.6■□□□□ 0.89
CPNE6-208ENST00000558795 CNKSR1Q969H4 720 aa20.6■□□□□ 0.89
CPNE6-208ENST00000558795 LTBP3Q9NS15 1303 aa20.59■□□□□ 0.89
CPNE6-208ENST00000558795 COL3A1P02461 1466 aaPredicted RBP20.59■□□□□ 0.89
CPNE6-208ENST00000558795 A1BGP04217 495 aa20.59■□□□□ 0.89
CPNE6-208ENST00000558795 CNGB1Q14028 1251 aaPredicted RBP20.59■□□□□ 0.89
CPNE6-208ENST00000558795 SOGA3Q5TF21 947 aa20.58■□□□□ 0.89
CPNE6-208ENST00000558795 STYK1Q6J9G0 422 aa20.58■□□□□ 0.89
CPNE6-208ENST00000558795 CAMTA2O94983 1202 aa20.57■□□□□ 0.88
CPNE6-208ENST00000558795 CHADLQ6NUI6 762 aa20.57■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms