RNA–Protein interactions for RNA: ENST00000558731.1

CSPG4P5-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 5, humanhuman

BASIC

Gene CSPG4P5, Length 3,730 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P5-201ENST00000558731 MAP4K4O95819 1239 aaPredicted RBP13.38□□□□□ -0.27
CSPG4P5-201ENST00000558731 HSP90AB1P08238 724 aaKnown RBP13.38□□□□□ -0.27
CSPG4P5-201ENST00000558731 PPP1R42Q7Z4L9 355 aa13.38□□□□□ -0.27
CSPG4P5-201ENST00000558731 CEMIPQ8WUJ3 1361 aa13.37□□□□□ -0.27
CSPG4P5-201ENST00000558731 USP44Q9H0E7 712 aa13.37□□□□□ -0.27
CSPG4P5-201ENST00000558731 NUTM1Q86Y26 1132 aa13.37□□□□□ -0.27
CSPG4P5-201ENST00000558731 MED1Q15648 1581 aaPredicted RBP13.37□□□□□ -0.27
CSPG4P5-201ENST00000558731 DCTPP1Q9H773 170 aa13.37□□□□□ -0.27
CSPG4P5-201ENST00000558731 SNRPA1P09661 255 aaKnown RBP13.36□□□□□ -0.27
CSPG4P5-201ENST00000558731 C22orf23Q9BZE7 217 aa13.36□□□□□ -0.27
CSPG4P5-201ENST00000558731 ZBTB3Q9H5J0 574 aa13.36□□□□□ -0.27
CSPG4P5-201ENST00000558731 TMOD3Q9NYL9 352 aa13.36□□□□□ -0.27
CSPG4P5-201ENST00000558731 HSP90AA1P07900 732 aaKnown RBP13.36□□□□□ -0.27
CSPG4P5-201ENST00000558731 RGPD1P0DJD0 1748 aa13.36□□□□□ -0.27
CSPG4P5-201ENST00000558731 BABAM1Q9NWV8 329 aa13.36□□□□□ -0.27
CSPG4P5-201ENST00000558731 ACSBG1Q96GR2 724 aa13.35□□□□□ -0.27
CSPG4P5-201ENST00000558731 PCDH11XQ9BZA7 1347 aa13.35□□□□□ -0.27
CSPG4P5-201ENST00000558731 PCDH11YQ9BZA8 1340 aa13.35□□□□□ -0.27
CSPG4P5-201ENST00000558731 A1BGP04217 495 aa13.35□□□□□ -0.27
CSPG4P5-201ENST00000558731 LRRCC1Q9C099 1032 aa13.35□□□□□ -0.27
CSPG4P5-201ENST00000558731 FOXD4L1Q9NU39 408 aa13.35□□□□□ -0.27
CSPG4P5-201ENST00000558731 HYPKQ9NX55 129 aa13.35□□□□□ -0.27
CSPG4P5-201ENST00000558731 BECN1Q14457 450 aa13.35□□□□□ -0.27
CSPG4P5-201ENST00000558731 PA2G4Q9UQ80 394 aaKnown RBP13.35□□□□□ -0.27
CSPG4P5-201ENST00000558731 KSR2Q6VAB6 950 aa13.34□□□□□ -0.27
CSPG4P5-201ENST00000558731 CCDC85AQ96PX6 553 aaPredicted RBP13.34□□□□□ -0.27
CSPG4P5-201ENST00000558731 DDX21Q9NR30 783 aaKnown RBP eCLIP13.34□□□□□ -0.27
CSPG4P5-201ENST00000558731 RGS12O14924 1447 aa13.34□□□□□ -0.27
CSPG4P5-201ENST00000558731 NCOA3Q9Y6Q9 1424 aa13.33□□□□□ -0.27
CSPG4P5-201ENST00000558731 KIF1AQ12756 1690 aa13.33□□□□□ -0.28
CSPG4P5-201ENST00000558731 PLEKHM2Q8IWE5 1019 aa13.33□□□□□ -0.28
CSPG4P5-201ENST00000558731 SLIT3O75094 1523 aa13.33□□□□□ -0.28
CSPG4P5-201ENST00000558731 EXOC5O00471 708 aa13.33□□□□□ -0.28
CSPG4P5-201ENST00000558731 KLHDC4Q8TBB5 520 aa13.33□□□□□ -0.28
CSPG4P5-201ENST00000558731 C8orf37Q96NL8 207 aa13.33□□□□□ -0.28
CSPG4P5-201ENST00000558731 CARD10Q9BWT7 1032 aa13.33□□□□□ -0.28
CSPG4P5-201ENST00000558731 RGPD5Q99666 1765 aa13.32□□□□□ -0.28
CSPG4P5-201ENST00000558731 MARF1Q9Y4F3 1742 aaKnown RBP13.32□□□□□ -0.28
CSPG4P5-201ENST00000558731 FAM177BA6PVY3 158 aa13.32□□□□□ -0.28
CSPG4P5-201ENST00000558731 BEND3Q5T5X7 828 aa13.32□□□□□ -0.28
CSPG4P5-201ENST00000558731 CASC1Q6TDU7 716 aa13.32□□□□□ -0.28
CSPG4P5-201ENST00000558731 ANKRD13DQ6ZTN6 518 aa13.32□□□□□ -0.28
CSPG4P5-201ENST00000558731 AEBP2Q6ZN18 517 aaPredicted RBP13.32□□□□□ -0.28
CSPG4P5-201ENST00000558731 TBC1D9Q6ZT07 1266 aa13.32□□□□□ -0.28
CSPG4P5-201ENST00000558731 UBE3BQ7Z3V4 1068 aa13.32□□□□□ -0.28
CSPG4P5-201ENST00000558731 HOXB7P09629 217 aa13.31□□□□□ -0.28
CSPG4P5-201ENST00000558731 ATP8B2P98198 1209 aa13.31□□□□□ -0.28
CSPG4P5-201ENST00000558731 TOM1O60784 492 aa13.31□□□□□ -0.28
CSPG4P5-201ENST00000558731 ASAP1Q9ULH1 1129 aa13.31□□□□□ -0.28
CSPG4P5-201ENST00000558731 KDM6AO15550 1401 aaPredicted RBP13.31□□□□□ -0.28
CSPG4P5-201ENST00000558731 CDC45O75419 566 aa13.31□□□□□ -0.28
CSPG4P5-201ENST00000558731 NGLY1Q96IV0 654 aa13.31□□□□□ -0.28
CSPG4P5-201ENST00000558731 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.31□□□□□ -0.28
CSPG4P5-201ENST00000558731 BMP2KLQ5H9B9 411 aa13.3□□□□□ -0.28
CSPG4P5-201ENST00000558731 GSPT1P15170 499 aaKnown RBP13.3□□□□□ -0.28
CSPG4P5-201ENST00000558731 A0A087WZG4 1122 aa13.29□□□□□ -0.28
CSPG4P5-201ENST00000558731 GRM8O00222 908 aa13.29□□□□□ -0.28
CSPG4P5-201ENST00000558731 SDSP20132 328 aa13.29□□□□□ -0.28
CSPG4P5-201ENST00000558731 CAMTA1Q9Y6Y1 1673 aa13.29□□□□□ -0.28
CSPG4P5-201ENST00000558731 TTC22Q5TAA0 569 aa13.29□□□□□ -0.28
CSPG4P5-201ENST00000558731 TTLL7Q6ZT98 887 aa13.29□□□□□ -0.28
CSPG4P5-201ENST00000558731 NOL8Q76FK4 1167 aaKnown RBP13.29□□□□□ -0.28
CSPG4P5-201ENST00000558731 STRCQ7RTU9 1775 aa13.29□□□□□ -0.28
CSPG4P5-201ENST00000558731 MX1P20591 662 aa13.28□□□□□ -0.28
CSPG4P5-201ENST00000558731 G3BP1Q13283 466 aaKnown RBP eCLIP13.28□□□□□ -0.28
CSPG4P5-201ENST00000558731 ADCY9O60503 1353 aa13.28□□□□□ -0.28
CSPG4P5-201ENST00000558731 CPDO75976 1380 aa13.28□□□□□ -0.28
CSPG4P5-201ENST00000558731 ATP10DQ9P241 1426 aa13.28□□□□□ -0.28
CSPG4P5-201ENST00000558731 GPTP24298 496 aa13.28□□□□□ -0.28
CSPG4P5-201ENST00000558731 DNAJC10Q8IXB1 793 aa13.28□□□□□ -0.28
CSPG4P5-201ENST00000558731 LINS1Q8NG48 757 aa13.28□□□□□ -0.28
CSPG4P5-201ENST00000558731 BICC1Q9H694 974 aaKnown RBP13.28□□□□□ -0.28
CSPG4P5-201ENST00000558731 PRIM1P49642 420 aaKnown RBP13.28□□□□□ -0.28
CSPG4P5-201ENST00000558731 HSCBQ8IWL3 235 aa13.28□□□□□ -0.28
CSPG4P5-201ENST00000558731 SUCLG2Q96I99 432 aa13.28□□□□□ -0.28
CSPG4P5-201ENST00000558731 TBC1D32Q96NH3 1257 aa13.28□□□□□ -0.28
CSPG4P5-201ENST00000558731 BRPF3Q9ULD4 1205 aa13.28□□□□□ -0.28
CSPG4P5-201ENST00000558731 TRPM3Q9HCF6 1732 aaPredicted RBP13.28□□□□□ -0.28
CSPG4P5-201ENST00000558731 SOS1Q07889 1333 aaPredicted RBP13.28□□□□□ -0.28
CSPG4P5-201ENST00000558731 IFIT2P09913 472 aaKnown RBP13.27□□□□□ -0.28
CSPG4P5-201ENST00000558731 PDE1AP54750 535 aa13.27□□□□□ -0.28
CSPG4P5-201ENST00000558731 NCAPD2Q15021 1401 aa13.27□□□□□ -0.28
CSPG4P5-201ENST00000558731 DDB1Q16531 1140 aa13.27□□□□□ -0.29
CSPG4P5-201ENST00000558731 RHPN1Q8TCX5 695 aa13.27□□□□□ -0.29
CSPG4P5-201ENST00000558731 FAM182BQ5T319 152 aa13.26□□□□□ -0.29
CSPG4P5-201ENST00000558731 MEX3CQ5U5Q3 659 aaKnown RBP13.26□□□□□ -0.29
CSPG4P5-201ENST00000558731 CLASRPQ8N2M8 674 aaKnown RBP13.26□□□□□ -0.29
CSPG4P5-201ENST00000558731 CCDC8Q9H0W5 538 aaPredicted RBP13.26□□□□□ -0.29
CSPG4P5-201ENST00000558731 ANO2Q9NQ90 1003 aa13.26□□□□□ -0.29
CSPG4P5-201ENST00000558731 COL5A2P05997 1499 aaPredicted RBP13.26□□□□□ -0.29
CSPG4P5-201ENST00000558731 PDIA6Q15084 440 aa13.26□□□□□ -0.29
CSPG4P5-201ENST00000558731 FAM98CQ17RN3 349 aaKnown RBP13.26□□□□□ -0.29
CSPG4P5-201ENST00000558731 AACSQ86V21 672 aa13.26□□□□□ -0.29
CSPG4P5-201ENST00000558731 PIGBQ92521 554 aa13.26□□□□□ -0.29
CSPG4P5-201ENST00000558731 IGKV5-2P06315 115 aa13.25□□□□□ -0.29
CSPG4P5-201ENST00000558731 KIF1BPQ96EK5 621 aa13.24□□□□□ -0.29
CSPG4P5-201ENST00000558731 NEURL1BA8MQ27 555 aa13.24□□□□□ -0.29
CSPG4P5-201ENST00000558731 ERVV-2B6SEH9 535 aa13.24□□□□□ -0.29
CSPG4P5-201ENST00000558731 ALDH1L1O75891 902 aa13.24□□□□□ -0.29
CSPG4P5-201ENST00000558731 KCNQ4P56696 695 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms