RNA–Protein interactions for RNA: ENST00000558705.1

PKNOX2-209, Transcript of PBX/knotted 1 homeobox 2, humanhuman

TSL 4

Gene PKNOX2, Length 554 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX2-209ENST00000558705 ARFGEF1Q9Y6D6 1849 aa18.55■□□□□ 0.56
PKNOX2-209ENST00000558705 CHRNA5P30532 468 aa18.54■□□□□ 0.56
PKNOX2-209ENST00000558705 GNAT3A8MTJ3 354 aa18.53■□□□□ 0.56
PKNOX2-209ENST00000558705 FCHSD2O94868 740 aa18.53■□□□□ 0.56
PKNOX2-209ENST00000558705 PRKAR2BP31323 418 aa18.53■□□□□ 0.56
PKNOX2-209ENST00000558705 ZNF496Q96IT1 587 aaPredicted RBP18.53■□□□□ 0.56
PKNOX2-209ENST00000558705 RSPH6AQ9H0K4 717 aa18.53■□□□□ 0.56
PKNOX2-209ENST00000558705 NRXN2Q9P2S2 1712 aa18.52■□□□□ 0.56
PKNOX2-209ENST00000558705 ZPR1O75312 459 aa18.52■□□□□ 0.56
PKNOX2-209ENST00000558705 CANXP27824 592 aaKnown RBP18.52■□□□□ 0.56
PKNOX2-209ENST00000558705 PPP2R1AP30153 589 aa18.52■□□□□ 0.56
PKNOX2-209ENST00000558705 NFIXQ14938 502 aa18.52■□□□□ 0.56
PKNOX2-209ENST00000558705 ARHGAP27Q6ZUM4 889 aa18.52■□□□□ 0.56
PKNOX2-209ENST00000558705 VSIG10Q8N0Z9 540 aa18.52■□□□□ 0.56
PKNOX2-209ENST00000558705 GAS2L2Q8NHY3 880 aa18.52■□□□□ 0.56
PKNOX2-209ENST00000558705 NARFQ9UHQ1 456 aa18.52■□□□□ 0.56
PKNOX2-209ENST00000558705 KCNQ3O43525 872 aa18.51■□□□□ 0.55
PKNOX2-209ENST00000558705 CEMIPQ8WUJ3 1361 aa18.51■□□□□ 0.55
PKNOX2-209ENST00000558705 TEFQ10587 303 aa18.5■□□□□ 0.55
PKNOX2-209ENST00000558705 ZNF790Q6PG37 636 aa18.5■□□□□ 0.55
PKNOX2-209ENST00000558705 TTC5Q8N0Z6 440 aa18.5■□□□□ 0.55
PKNOX2-209ENST00000558705 HEG1Q9ULI3 1381 aa18.5■□□□□ 0.55
PKNOX2-209ENST00000558705 KIF3CO14782 793 aa18.49■□□□□ 0.55
PKNOX2-209ENST00000558705 PIM2Q9P1W9 311 aa18.49■□□□□ 0.55
PKNOX2-209ENST00000558705 CARMIL3Q8ND23 1372 aa18.48■□□□□ 0.55
PKNOX2-209ENST00000558705 EIF5P55010 431 aaKnown RBP18.48■□□□□ 0.55
PKNOX2-209ENST00000558705 CFAP53Q96M91 514 aa18.48■□□□□ 0.55
PKNOX2-209ENST00000558705 SCN7AQ01118 1682 aa18.47■□□□□ 0.55
PKNOX2-209ENST00000558705 DALRD3Q5D0E6 543 aaKnown RBP18.47■□□□□ 0.55
PKNOX2-209ENST00000558705 DLEC1Q9Y238 1755 aa18.47■□□□□ 0.55
PKNOX2-209ENST00000558705 STARD3NLO95772 234 aa18.46■□□□□ 0.55
PKNOX2-209ENST00000558705 SERPINB2P05120 415 aa18.46■□□□□ 0.55
PKNOX2-209ENST00000558705 U2AF1L5P0DN76 240 aaPredicted RBP18.46■□□□□ 0.55
PKNOX2-209ENST00000558705 U2AF1Q01081 240 aaKnown RBP eCLIP18.46■□□□□ 0.55
PKNOX2-209ENST00000558705 A1BGP04217 495 aa18.45■□□□□ 0.54
PKNOX2-209ENST00000558705 C9orf131Q5VYM1 1079 aa18.45■□□□□ 0.54
PKNOX2-209ENST00000558705 BICDL1Q6ZP65 573 aa18.45■□□□□ 0.54
PKNOX2-209ENST00000558705 SBF1O95248 1867 aa18.45■□□□□ 0.54
PKNOX2-209ENST00000558705 ANKRD31Q8N7Z5 1873 aa18.45■□□□□ 0.54
PKNOX2-209ENST00000558705 PRAMEF22A3QJZ6 481 aa18.44■□□□□ 0.54
PKNOX2-209ENST00000558705 DCTN1Q14203 1278 aa18.44■□□□□ 0.54
PKNOX2-209ENST00000558705 TBC1D9BQ66K14 1250 aa18.44■□□□□ 0.54
PKNOX2-209ENST00000558705 MCM10Q7L590 875 aa18.44■□□□□ 0.54
PKNOX2-209ENST00000558705 TBC1D2BQ9UPU7 963 aa18.44■□□□□ 0.54
PKNOX2-209ENST00000558705 BTBD11A6QL63 1104 aa18.43■□□□□ 0.54
PKNOX2-209ENST00000558705 PIP4K2AP48426 406 aaPredicted RBP18.43■□□□□ 0.54
PKNOX2-209ENST00000558705 FMNL2Q96PY5 1086 aa18.43■□□□□ 0.54
PKNOX2-209ENST00000558705 NMRK2Q9NPI5 230 aa18.43■□□□□ 0.54
PKNOX2-209ENST00000558705 NUDCQ9Y266 331 aa18.43■□□□□ 0.54
PKNOX2-209ENST00000558705 ZNF330Q9Y3S2 320 aaPredicted RBP18.43■□□□□ 0.54
PKNOX2-209ENST00000558705 CCDC24Q8N4L8 307 aa18.42■□□□□ 0.54
PKNOX2-209ENST00000558705 COL11A2P13942 1736 aaPredicted RBP18.42■□□□□ 0.54
PKNOX2-209ENST00000558705 BCORQ6W2J9 1755 aa18.42■□□□□ 0.54
PKNOX2-209ENST00000558705 PRELPP51888 382 aa18.41■□□□□ 0.54
PKNOX2-209ENST00000558705 USP16Q9Y5T5 823 aa18.41■□□□□ 0.54
PKNOX2-209ENST00000558705 A0A087WZG4 1122 aa18.4■□□□□ 0.54
PKNOX2-209ENST00000558705 HSPA6P17066 643 aa18.4■□□□□ 0.54
PKNOX2-209ENST00000558705 IL6STP40189 918 aaPredicted RBP18.4■□□□□ 0.54
PKNOX2-209ENST00000558705 RASSF7Q02833 373 aa18.4■□□□□ 0.54
PKNOX2-209ENST00000558705 TEX13AQ9BXU3 409 aaPredicted RBP18.4■□□□□ 0.54
PKNOX2-209ENST00000558705 DLG5Q8TDM6 1919 aa18.4■□□□□ 0.54
PKNOX2-209ENST00000558705 CEP350Q5VT06 3117 aa18.39■□□□□ 0.53
PKNOX2-209ENST00000558705 CAMTA2O94983 1202 aa18.39■□□□□ 0.53
PKNOX2-209ENST00000558705 C2CD5Q86YS7 1000 aa18.39■□□□□ 0.53
PKNOX2-209ENST00000558705 RNF181Q9P0P0 153 aa18.39■□□□□ 0.53
PKNOX2-209ENST00000558705 PRR5LQ6MZQ0 368 aa18.37■□□□□ 0.53
PKNOX2-209ENST00000558705 RTF1Q92541 710 aaKnown RBP18.37■□□□□ 0.53
PKNOX2-209ENST00000558705 CCDC88AQ3V6T2 1871 aa18.36■□□□□ 0.53
PKNOX2-209ENST00000558705 MIS18AQ9NYP9 233 aa18.36■□□□□ 0.53
PKNOX2-209ENST00000558705 DZIP3Q86Y13 1208 aaKnown RBP18.35■□□□□ 0.53
PKNOX2-209ENST00000558705 TTLL6Q8N841 843 aa18.35■□□□□ 0.53
PKNOX2-209ENST00000558705 NBPF26B4DH59 902 aa18.34■□□□□ 0.53
PKNOX2-209ENST00000558705 H0YIN7 160 aa18.34■□□□□ 0.53
PKNOX2-209ENST00000558705 NFKBIEO00221 500 aa18.34■□□□□ 0.53
PKNOX2-209ENST00000558705 SNRPA1P09661 255 aaKnown RBP18.34■□□□□ 0.53
PKNOX2-209ENST00000558705 NBPF10Q6P3W6 841 aaKnown RBP18.34■□□□□ 0.53
PKNOX2-209ENST00000558705 NBPF15Q8N660 670 aa18.34■□□□□ 0.53
PKNOX2-209ENST00000558705 CACNA1SQ13698 1873 aa18.34■□□□□ 0.53
PKNOX2-209ENST00000558705 KDM3BQ7LBC6 1761 aa18.34■□□□□ 0.53
PKNOX2-209ENST00000558705 TIAM2Q8IVF5 1701 aa18.33■□□□□ 0.52
PKNOX2-209ENST00000558705 HTATSF1O43719 755 aaKnown RBP18.33■□□□□ 0.52
PKNOX2-209ENST00000558705 TOMM70O94826 608 aa18.33■□□□□ 0.52
PKNOX2-209ENST00000558705 PLEKHF1Q96S99 279 aa18.33■□□□□ 0.52
PKNOX2-209ENST00000558705 LAMB4A4D0S4 1761 aa18.32■□□□□ 0.52
PKNOX2-209ENST00000558705 TNRC6CQ9HCJ0 1690 aaKnown RBP18.32■□□□□ 0.52
PKNOX2-209ENST00000558705 THUMPD2Q9BTF0 503 aaKnown RBP18.32■□□□□ 0.52
PKNOX2-209ENST00000558705 BRIP1Q9BX63 1249 aa18.32■□□□□ 0.52
PKNOX2-209ENST00000558705 ZNF219Q9P2Y4 722 aaPredicted RBP18.32■□□□□ 0.52
PKNOX2-209ENST00000558705 SLX4Q8IY92 1834 aa18.31■□□□□ 0.52
PKNOX2-209ENST00000558705 TAF7Q15545 349 aaPredicted RBP18.31■□□□□ 0.52
PKNOX2-209ENST00000558705 ZNF622Q969S3 477 aaKnown RBP eCLIP18.31■□□□□ 0.52
PKNOX2-209ENST00000558705 SETDB2Q96T68 719 aa18.31■□□□□ 0.52
PKNOX2-209ENST00000558705 RRAGCQ9HB90 399 aa18.31■□□□□ 0.52
PKNOX2-209ENST00000558705 LMNB1P20700 586 aa18.3■□□□□ 0.52
PKNOX2-209ENST00000558705 CNBD1Q8NA66 436 aa18.3■□□□□ 0.52
PKNOX2-209ENST00000558705 FER1L6Q2WGJ9 1857 aa18.3■□□□□ 0.52
PKNOX2-209ENST00000558705 C21orf2O43822 256 aa18.29■□□□□ 0.52
PKNOX2-209ENST00000558705 PDE6BP35913 854 aa18.29■□□□□ 0.52
PKNOX2-209ENST00000558705 NPM2Q86SE8 214 aaKnown RBP18.29■□□□□ 0.52
PKNOX2-209ENST00000558705 KDM2BQ8NHM5 1336 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms