RNA–Protein interactions for RNA: ENST00000558655.5

ZEB1-212, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 2

Gene ZEB1, Length 2,773 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-212ENST00000558655 HOXC9P31274 260 aa5.38□□□□□ -1.55
ZEB1-212ENST00000558655 KIAA0232Q92628 1395 aa5.37□□□□□ -1.55
ZEB1-212ENST00000558655 KDM4AO75164 1064 aa5.37□□□□□ -1.55
ZEB1-212ENST00000558655 IL13P35225 146 aa5.37□□□□□ -1.55
ZEB1-212ENST00000558655 MTHFSP49914 203 aa5.37□□□□□ -1.55
ZEB1-212ENST00000558655 STK32BQ9NY57 414 aa5.37□□□□□ -1.55
ZEB1-212ENST00000558655 SCN11AQ9UI33 1791 aa5.37□□□□□ -1.55
ZEB1-212ENST00000558655 IGSF1Q8N6C5 1336 aa5.37□□□□□ -1.55
ZEB1-212ENST00000558655 FOXN1O15353 648 aa5.37□□□□□ -1.55
ZEB1-212ENST00000558655 APBA3O96018 575 aa5.37□□□□□ -1.55
ZEB1-212ENST00000558655 PRKAR2AP13861 404 aaKnown RBP5.37□□□□□ -1.55
ZEB1-212ENST00000558655 FXR2P51116 673 aaKnown RBP eCLIP5.37□□□□□ -1.55
ZEB1-212ENST00000558655 PNISRQ8TF01 805 aaKnown RBP5.37□□□□□ -1.55
ZEB1-212ENST00000558655 CFAP53Q96M91 514 aa5.37□□□□□ -1.55
ZEB1-212ENST00000558655 HAX1O00165 279 aa5.36□□□□□ -1.55
ZEB1-212ENST00000558655 HSPA8P11142 646 aaKnown RBP5.36□□□□□ -1.55
ZEB1-212ENST00000558655 POLD1P28340 1107 aa5.36□□□□□ -1.55
ZEB1-212ENST00000558655 MKRN3Q13064 507 aaKnown RBP5.36□□□□□ -1.55
ZEB1-212ENST00000558655 ADAMTS2O95450 1211 aa5.36□□□□□ -1.55
ZEB1-212ENST00000558655 FXR1P51114 621 aaKnown RBP eCLIP5.36□□□□□ -1.55
ZEB1-212ENST00000558655 MAP2K1Q02750 393 aaPredicted RBP5.36□□□□□ -1.55
ZEB1-212ENST00000558655 CCDC27Q2M243 656 aa5.36□□□□□ -1.55
ZEB1-212ENST00000558655 PLCD3Q8N3E9 789 aa5.36□□□□□ -1.55
ZEB1-212ENST00000558655 WBP1LQ9NX94 342 aa5.36□□□□□ -1.55
ZEB1-212ENST00000558655 EMILIN1Q9Y6C2 1016 aa5.36□□□□□ -1.55
ZEB1-212ENST00000558655 CCDC85CA6NKD9 419 aa5.35□□□□□ -1.55
ZEB1-212ENST00000558655 GPR153Q6NV75 609 aa5.35□□□□□ -1.55
ZEB1-212ENST00000558655 TRAIPQ9BWF2 469 aa5.35□□□□□ -1.55
ZEB1-212ENST00000558655 CRB1P82279 1406 aa5.35□□□□□ -1.55
ZEB1-212ENST00000558655 CNTNAP1P78357 1384 aa5.35□□□□□ -1.55
ZEB1-212ENST00000558655 ERBB3P21860 1342 aa5.35□□□□□ -1.55
ZEB1-212ENST00000558655 OVOS2A0A0G2JMS6 1433 aa5.35□□□□□ -1.55
ZEB1-212ENST00000558655 DIAPH1O60610 1272 aaKnown RBP5.35□□□□□ -1.55
ZEB1-212ENST00000558655 HNRNPUQ00839 825 aaKnown RBP eCLIP5.35□□□□□ -1.55
ZEB1-212ENST00000558655 EIF4A2Q14240 407 aaKnown RBP5.35□□□□□ -1.55
ZEB1-212ENST00000558655 NGEFQ8N5V2 710 aa5.35□□□□□ -1.55
ZEB1-212ENST00000558655 CD2APQ9Y5K6 639 aa5.35□□□□□ -1.55
ZEB1-212ENST00000558655 SBF2Q86WG5 1849 aa5.35□□□□□ -1.55
ZEB1-212ENST00000558655 WDR17Q8IZU2 1322 aa5.35□□□□□ -1.55
ZEB1-212ENST00000558655 KDM2BQ8NHM5 1336 aa5.35□□□□□ -1.55
ZEB1-212ENST00000558655 RRS1Q15050 365 aaKnown RBP5.34□□□□□ -1.55
ZEB1-212ENST00000558655 NUTM2GQ5VZR2 741 aa5.34□□□□□ -1.55
ZEB1-212ENST00000558655 COL26A1Q96A83 441 aa5.34□□□□□ -1.55
ZEB1-212ENST00000558655 FAM9BQ8IZU0 186 aa5.34□□□□□ -1.55
ZEB1-212ENST00000558655 KDM3BQ7LBC6 1761 aa5.34□□□□□ -1.56
ZEB1-212ENST00000558655 FCHSD2O94868 740 aa5.33□□□□□ -1.56
ZEB1-212ENST00000558655 AMPHP49418 695 aa5.33□□□□□ -1.56
ZEB1-212ENST00000558655 EVX2Q03828 476 aa5.33□□□□□ -1.56
ZEB1-212ENST00000558655 HSP90AB2PQ58FF8 381 aa5.33□□□□□ -1.56
ZEB1-212ENST00000558655 CABLES1Q8TDN4 633 aa5.33□□□□□ -1.56
ZEB1-212ENST00000558655 ZC3H15Q8WU90 426 aaKnown RBP5.33□□□□□ -1.56
ZEB1-212ENST00000558655 CARD10Q9BWT7 1032 aa5.33□□□□□ -1.56
ZEB1-212ENST00000558655 MRS2Q9HD23 443 aa5.33□□□□□ -1.56
ZEB1-212ENST00000558655 NUDCQ9Y266 331 aa5.33□□□□□ -1.56
ZEB1-212ENST00000558655 AXIN2Q9Y2T1 843 aa5.33□□□□□ -1.56
ZEB1-212ENST00000558655 MRC1P22897 1456 aa5.33□□□□□ -1.56
ZEB1-212ENST00000558655 ZNF831Q5JPB2 1677 aa5.33□□□□□ -1.56
ZEB1-212ENST00000558655 TOGARAM1Q9Y4F4 1720 aa5.33□□□□□ -1.56
ZEB1-212ENST00000558655 ITGB4P16144 1822 aa5.33□□□□□ -1.56
ZEB1-212ENST00000558655 ANKRD13DQ6ZTN6 518 aa5.33□□□□□ -1.56
ZEB1-212ENST00000558655 ANKRD24Q8TF21 1146 aa5.33□□□□□ -1.56
ZEB1-212ENST00000558655 PLEKHF1Q96S99 279 aa5.33□□□□□ -1.56
ZEB1-212ENST00000558655 PNNQ9H307 717 aaKnown RBP5.33□□□□□ -1.56
ZEB1-212ENST00000558655 PRDM11Q9NQV5 511 aa5.33□□□□□ -1.56
ZEB1-212ENST00000558655 RBBP6Q7Z6E9 1792 aaKnown RBP5.33□□□□□ -1.56
ZEB1-212ENST00000558655 UBR2Q8IWV8 1755 aa5.33□□□□□ -1.56
ZEB1-212ENST00000558655 FBLN1P23142 703 aa5.33□□□□□ -1.56
ZEB1-212ENST00000558655 IL27Q8NEV9 243 aa5.33□□□□□ -1.56
ZEB1-212ENST00000558655 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP5.33□□□□□ -1.561e-7■■■■■ 28.4
ZEB1-212ENST00000558655 THRAP3Q9Y2W1 955 aaKnown RBP5.33□□□□□ -1.56
ZEB1-212ENST00000558655 NCLP19338 710 aaKnown RBP5.32□□□□□ -1.56
ZEB1-212ENST00000558655 TEX2Q8IWB9 1127 aa5.32□□□□□ -1.56
ZEB1-212ENST00000558655 CNPY4Q8N129 248 aa5.32□□□□□ -1.56
ZEB1-212ENST00000558655 EYA1Q99502 592 aa5.32□□□□□ -1.56
ZEB1-212ENST00000558655 SPATA31A5Q5VU36 1347 aa5.32□□□□□ -1.56
ZEB1-212ENST00000558655 SPATA31A7Q8IWB4 1347 aa5.32□□□□□ -1.56
ZEB1-212ENST00000558655 NHSQ6T4R5 1651 aa5.32□□□□□ -1.56
ZEB1-212ENST00000558655 TNNT2P45379 298 aaPredicted RBP5.32□□□□□ -1.56
ZEB1-212ENST00000558655 ZC3H6P61129 1189 aaKnown RBP5.32□□□□□ -1.56
ZEB1-212ENST00000558655 BARGINQ6ZT62 677 aa5.32□□□□□ -1.56
ZEB1-212ENST00000558655 CDCA7Q9BWT1 371 aaPredicted RBP5.32□□□□□ -1.56
ZEB1-212ENST00000558655 RUNDC1Q96C34 613 aa5.31□□□□□ -1.56
ZEB1-212ENST00000558655 SPATA31A1Q5TZJ5 1347 aa5.31□□□□□ -1.56
ZEB1-212ENST00000558655 CACNA1FO60840 1977 aa5.31□□□□□ -1.56
ZEB1-212ENST00000558655 DOT1LQ8TEK3 1739 aa5.31□□□□□ -1.56
ZEB1-212ENST00000558655 WDR43Q15061 677 aaKnown RBP eCLIP5.31□□□□□ -1.56
ZEB1-212ENST00000558655 NBPF6Q5VWK0 638 aa5.31□□□□□ -1.56
ZEB1-212ENST00000558655 NBPF4Q96M43 638 aa5.31□□□□□ -1.56
ZEB1-212ENST00000558655 ADAMTS8Q9UP79 889 aa5.31□□□□□ -1.56
ZEB1-212ENST00000558655 A0A1W2PPC1 479 aa5.3□□□□□ -1.56
ZEB1-212ENST00000558655 CHRNA2Q15822 529 aa5.3□□□□□ -1.56
ZEB1-212ENST00000558655 SLC15A2Q16348 729 aa5.3□□□□□ -1.56
ZEB1-212ENST00000558655 ZNF521Q96K83 1311 aa5.3□□□□□ -1.56
ZEB1-212ENST00000558655 LAMB4A4D0S4 1761 aa5.3□□□□□ -1.56
ZEB1-212ENST00000558655 HTATSF1O43719 755 aaKnown RBP5.3□□□□□ -1.56
ZEB1-212ENST00000558655 IRF5Q13568 498 aa5.3□□□□□ -1.56
ZEB1-212ENST00000558655 BTG4Q9NY30 223 aa5.3□□□□□ -1.56
ZEB1-212ENST00000558655 AMOTQ4VCS5 1084 aa5.29□□□□□ -1.56
ZEB1-212ENST00000558655 P2RX7Q99572 595 aaKnown RBP5.29□□□□□ -1.56
ZEB1-212ENST00000558655 FARP1Q9Y4F1 1045 aaPredicted RBP5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms