RNA–Protein interactions for RNA: ENST00000558635.1

PSMA4-207, Transcript of proteasome subunit alpha 4, humanhuman

TSL 1 (best)

Gene PSMA4, Length 736 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA4-207ENST00000558635 SALL2Q9Y467 1007 aaPredicted RBP13.63□□□□□ -0.23
PSMA4-207ENST00000558635 BTAF1O14981 1849 aa13.62□□□□□ -0.23
PSMA4-207ENST00000558635 ITGB4P16144 1822 aa13.62□□□□□ -0.23
PSMA4-207ENST00000558635 PALLDQ8WX93 1383 aa13.62□□□□□ -0.23
PSMA4-207ENST00000558635 SLC39A6Q13433 755 aa13.62□□□□□ -0.23
PSMA4-207ENST00000558635 TAF7Q15545 349 aaPredicted RBP13.62□□□□□ -0.23
PSMA4-207ENST00000558635 DLG5Q8TDM6 1919 aa13.62□□□□□ -0.23
PSMA4-207ENST00000558635 BTBD11A6QL63 1104 aa13.61□□□□□ -0.23
PSMA4-207ENST00000558635 TIE1P35590 1138 aa13.61□□□□□ -0.23
PSMA4-207ENST00000558635 TXNRD1Q16881 649 aa13.61□□□□□ -0.23
PSMA4-207ENST00000558635 BMP2KQ9NSY1 1161 aaPredicted RBP13.61□□□□□ -0.23
PSMA4-207ENST00000558635 MIS18AQ9NYP9 233 aa13.61□□□□□ -0.23
PSMA4-207ENST00000558635 PTCD1O75127 700 aaKnown RBP13.6□□□□□ -0.23
PSMA4-207ENST00000558635 ATN1P54259 1190 aaPredicted RBP13.6□□□□□ -0.23
PSMA4-207ENST00000558635 KCNQ4P56696 695 aa13.6□□□□□ -0.23
PSMA4-207ENST00000558635 CCDC27Q2M243 656 aa13.6□□□□□ -0.23
PSMA4-207ENST00000558635 IFNL1Q8IU54 200 aa13.6□□□□□ -0.23
PSMA4-207ENST00000558635 KCNQ3O43525 872 aa13.59□□□□□ -0.23
PSMA4-207ENST00000558635 ZNF790Q6PG37 636 aa13.59□□□□□ -0.23
PSMA4-207ENST00000558635 WWC1Q8IX03 1113 aa13.59□□□□□ -0.23
PSMA4-207ENST00000558635 LRRC4BQ9NT99 713 aa13.59□□□□□ -0.23
PSMA4-207ENST00000558635 CCNL1Q9UK58 526 aaPredicted RBP13.59□□□□□ -0.23
PSMA4-207ENST00000558635 LOC102724428A0A0B4J2F2 783 aa13.58□□□□□ -0.24
PSMA4-207ENST00000558635 SIK1P57059 783 aa13.58□□□□□ -0.24
PSMA4-207ENST00000558635 SLC27A3Q5K4L6 730 aa13.58□□□□□ -0.24
PSMA4-207ENST00000558635 TTC5Q8N0Z6 440 aa13.58□□□□□ -0.24
PSMA4-207ENST00000558635 NGEFQ8N5V2 710 aa13.58□□□□□ -0.24
PSMA4-207ENST00000558635 SLC39A7Q92504 469 aa13.58□□□□□ -0.24
PSMA4-207ENST00000558635 LAS1LQ9Y4W2 734 aaKnown RBP13.58□□□□□ -0.24
PSMA4-207ENST00000558635 VIRMAQ69YN4 1812 aaKnown RBP13.57□□□□□ -0.24
PSMA4-207ENST00000558635 C7P10643 843 aa13.57□□□□□ -0.24
PSMA4-207ENST00000558635 SLC4A9Q96Q91 983 aa13.57□□□□□ -0.24
PSMA4-207ENST00000558635 TSPYL4Q9UJ04 414 aa13.57□□□□□ -0.24
PSMA4-207ENST00000558635 SIPA1L3O60292 1781 aaPredicted RBP13.56□□□□□ -0.24
PSMA4-207ENST00000558635 CHL1O00533 1208 aa13.56□□□□□ -0.24
PSMA4-207ENST00000558635 ATP6V1AP38606 617 aa13.56□□□□□ -0.24
PSMA4-207ENST00000558635 CALD1Q05682 793 aaKnown RBP13.56□□□□□ -0.24
PSMA4-207ENST00000558635 ZNF496Q96IT1 587 aaPredicted RBP13.56□□□□□ -0.24
PSMA4-207ENST00000558635 BABAM1Q9NWV8 329 aa13.56□□□□□ -0.24
PSMA4-207ENST00000558635 ITPK1Q13572 414 aa13.55□□□□□ -0.24
PSMA4-207ENST00000558635 WDR63Q8IWG1 891 aa13.55□□□□□ -0.24
PSMA4-207ENST00000558635 CFAP44Q96MT7 982 aa13.55□□□□□ -0.24
PSMA4-207ENST00000558635 FMNL2Q96PY5 1086 aa13.55□□□□□ -0.24
PSMA4-207ENST00000558635 METRNQ9UJH8 293 aa13.55□□□□□ -0.24
PSMA4-207ENST00000558635 RGPD3A6NKT7 1758 aaPredicted RBP13.55□□□□□ -0.24
PSMA4-207ENST00000558635 RGPD4Q7Z3J3 1758 aa13.55□□□□□ -0.24
PSMA4-207ENST00000558635 KCPQ6ZWJ8 1503 aa13.54□□□□□ -0.24
PSMA4-207ENST00000558635 PAPPAQ13219 1627 aa13.54□□□□□ -0.24
PSMA4-207ENST00000558635 TTLL13PA6NNM8 815 aa13.54□□□□□ -0.24
PSMA4-207ENST00000558635 ZNF853P0CG23 659 aa13.54□□□□□ -0.24
PSMA4-207ENST00000558635 GNAI1P63096 354 aa13.54□□□□□ -0.24
PSMA4-207ENST00000558635 IFT57Q9NWB7 429 aa13.54□□□□□ -0.24
PSMA4-207ENST00000558635 LY75O60449 1722 aa13.53□□□□□ -0.24
PSMA4-207ENST00000558635 EIF4A1P60842 406 aaKnown RBP13.53□□□□□ -0.24
PSMA4-207ENST00000558635 DNAJC10Q8IXB1 793 aa13.53□□□□□ -0.24
PSMA4-207ENST00000558635 VSIG10Q8N0Z9 540 aa13.53□□□□□ -0.24
PSMA4-207ENST00000558635 LINC00116Q8NCU8 138 aa13.53□□□□□ -0.24
PSMA4-207ENST00000558635 MBIPQ9NS73 344 aa13.53□□□□□ -0.24
PSMA4-207ENST00000558635 IL16Q14005 1332 aa13.53□□□□□ -0.24
PSMA4-207ENST00000558635 HEG1Q9ULI3 1381 aa13.53□□□□□ -0.24
PSMA4-207ENST00000558635 HNRNPUQ00839 825 aaKnown RBP eCLIP13.52□□□□□ -0.25
PSMA4-207ENST00000558635 NBPF14Q5TI25 921 aa13.52□□□□□ -0.25
PSMA4-207ENST00000558635 ANO8Q9HCE9 1232 aaPredicted RBP13.52□□□□□ -0.25
PSMA4-207ENST00000558635 CIZ1Q9ULV3 898 aaPredicted RBP13.52□□□□□ -0.25
PSMA4-207ENST00000558635 ZNF521Q96K83 1311 aa13.52□□□□□ -0.25
PSMA4-207ENST00000558635 RREB1Q92766 1687 aa13.52□□□□□ -0.25
PSMA4-207ENST00000558635 SNRPA1P09661 255 aaKnown RBP13.51□□□□□ -0.25
PSMA4-207ENST00000558635 ZNF827Q17R98 1081 aa13.51□□□□□ -0.25
PSMA4-207ENST00000558635 STK32BQ9NY57 414 aa13.51□□□□□ -0.25
PSMA4-207ENST00000558635 NUP188Q5SRE5 1749 aa13.5□□□□□ -0.25
PSMA4-207ENST00000558635 PRAMEF22A3QJZ6 481 aa13.5□□□□□ -0.25
PSMA4-207ENST00000558635 CHRM1P11229 460 aaPredicted RBP13.5□□□□□ -0.25
PSMA4-207ENST00000558635 HMGB2P26583 209 aaKnown RBP13.5□□□□□ -0.25
PSMA4-207ENST00000558635 SLC15A2Q16348 729 aa13.5□□□□□ -0.25
PSMA4-207ENST00000558635 TSR2Q969E8 191 aaKnown RBP13.5□□□□□ -0.25
PSMA4-207ENST00000558635 TEX13AQ9BXU3 409 aaPredicted RBP13.5□□□□□ -0.25
PSMA4-207ENST00000558635 UBR2Q8IWV8 1755 aa13.5□□□□□ -0.25
PSMA4-207ENST00000558635 GIGYF1O75420 1035 aaPredicted RBP13.49□□□□□ -0.25
PSMA4-207ENST00000558635 CYP19A1P11511 503 aaPredicted RBP13.49□□□□□ -0.25
PSMA4-207ENST00000558635 CRKLP46109 303 aaKnown RBP13.49□□□□□ -0.25
PSMA4-207ENST00000558635 GOLGA2Q08379 1002 aa13.49□□□□□ -0.25
PSMA4-207ENST00000558635 KRT24Q2M2I5 525 aa13.49□□□□□ -0.25
PSMA4-207ENST00000558635 PCDHB8Q9UN66 801 aa13.49□□□□□ -0.25
PSMA4-207ENST00000558635 USP16Q9Y5T5 823 aa13.49□□□□□ -0.25
PSMA4-207ENST00000558635 KDM3BQ7LBC6 1761 aa13.49□□□□□ -0.25
PSMA4-207ENST00000558635 ZNF831Q5JPB2 1677 aa13.48□□□□□ -0.25
PSMA4-207ENST00000558635 POTEB2H3BUK9 544 aa13.48□□□□□ -0.25
PSMA4-207ENST00000558635 STARD3NLO95772 234 aa13.48□□□□□ -0.25
PSMA4-207ENST00000558635 R3HDM1Q15032 1099 aaKnown RBP13.48□□□□□ -0.25
PSMA4-207ENST00000558635 RC3H1Q5TC82 1133 aaKnown RBP13.48□□□□□ -0.25
PSMA4-207ENST00000558635 INTS5Q6P9B9 1019 aaKnown RBP13.48□□□□□ -0.25
PSMA4-207ENST00000558635 AK7Q96M32 723 aa13.48□□□□□ -0.25
PSMA4-207ENST00000558635 TMEM106CQ9BVX2 250 aa13.48□□□□□ -0.25
PSMA4-207ENST00000558635 TFCP2L1Q9NZI6 479 aa13.48□□□□□ -0.25
PSMA4-207ENST00000558635 CNTNAP4Q9C0A0 1308 aa13.47□□□□□ -0.25
PSMA4-207ENST00000558635 FANCIQ9NVI1 1328 aa13.47□□□□□ -0.25
PSMA4-207ENST00000558635 CDCA7LQ96GN5 454 aa13.47□□□□□ -0.25
PSMA4-207ENST00000558635 MYH16Q9H6N6 1097 aa13.47□□□□□ -0.25
PSMA4-207ENST00000558635 CCDC87Q9NVE4 849 aa13.47□□□□□ -0.25
PSMA4-207ENST00000558635 TJP1Q07157 1748 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms