RNA–Protein interactions for RNA: ENST00000558609.1

CSHL1-208, Transcript of chorionic somatomammotropin hormone like 1, humanhuman

TSL 3

Gene CSHL1, Length 1,081 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSHL1-208ENST00000558609 PLEKHF1Q96S99 279 aa20.6■□□□□ 0.89
CSHL1-208ENST00000558609 ZBTB1Q9Y2K1 713 aa20.6■□□□□ 0.89
CSHL1-208ENST00000558609 NEFMP07197 916 aa20.59■□□□□ 0.89
CSHL1-208ENST00000558609 FKBP8Q14318 412 aa20.59■□□□□ 0.89
CSHL1-208ENST00000558609 MCM10Q7L590 875 aa20.59■□□□□ 0.89
CSHL1-208ENST00000558609 FMNL2Q96PY5 1086 aa20.59■□□□□ 0.89
CSHL1-208ENST00000558609 ZPR1O75312 459 aa20.58■□□□□ 0.89
CSHL1-208ENST00000558609 PNNQ9H307 717 aaKnown RBP20.58■□□□□ 0.89
CSHL1-208ENST00000558609 PARP3Q9Y6F1 533 aa20.58■□□□□ 0.89
CSHL1-208ENST00000558609 ATP10DQ9P241 1426 aa20.58■□□□□ 0.88
CSHL1-208ENST00000558609 KCNQ3O43525 872 aa20.57■□□□□ 0.88
CSHL1-208ENST00000558609 DCTN1Q14203 1278 aa20.57■□□□□ 0.88
CSHL1-208ENST00000558609 NARFQ9UHQ1 456 aa20.57■□□□□ 0.88
CSHL1-208ENST00000558609 COL15A1P39059 1388 aa20.57■□□□□ 0.88
CSHL1-208ENST00000558609 KIF13BQ9NQT8 1826 aa20.56■□□□□ 0.88
CSHL1-208ENST00000558609 TGFB2P61812 414 aa20.56■□□□□ 0.88
CSHL1-208ENST00000558609 MYBBP1AQ9BQG0 1328 aaKnown RBP20.55■□□□□ 0.88
CSHL1-208ENST00000558609 C10orf71Q711Q0 1435 aa20.55■□□□□ 0.88
CSHL1-208ENST00000558609 CANXP27824 592 aaKnown RBP20.55■□□□□ 0.88
CSHL1-208ENST00000558609 TM4SF1P30408 202 aa20.55■□□□□ 0.88
CSHL1-208ENST00000558609 EIF5P55010 431 aaKnown RBP20.55■□□□□ 0.88
CSHL1-208ENST00000558609 USPL1Q5W0Q7 1092 aa20.55■□□□□ 0.88
CSHL1-208ENST00000558609 ZEB1P37275 1124 aaPredicted RBP20.54■□□□□ 0.88
CSHL1-208ENST00000558609 DDR1Q08345 913 aa20.54■□□□□ 0.88
CSHL1-208ENST00000558609 NFE2L2Q16236 605 aa20.54■□□□□ 0.88
CSHL1-208ENST00000558609 A0A087WZG4 1122 aa20.53■□□□□ 0.88
CSHL1-208ENST00000558609 TAF7Q15545 349 aaPredicted RBP20.53■□□□□ 0.88
CSHL1-208ENST00000558609 PXDNLA1KZ92 1463 aa20.52■□□□□ 0.88
CSHL1-208ENST00000558609 MAPK8IP3Q9UPT6 1336 aa20.52■□□□□ 0.87
CSHL1-208ENST00000558609 DLG5Q8TDM6 1919 aa20.51■□□□□ 0.87
CSHL1-208ENST00000558609 ADCY9O60503 1353 aa20.51■□□□□ 0.87
CSHL1-208ENST00000558609 POLRMTO00411 1230 aaKnown RBP20.51■□□□□ 0.87
CSHL1-208ENST00000558609 IL6STP40189 918 aaPredicted RBP20.51■□□□□ 0.87
CSHL1-208ENST00000558609 BCL2L12Q9HB09 334 aa20.51■□□□□ 0.87
CSHL1-208ENST00000558609 KIAA1551Q9HCM1 1747 aa20.5■□□□□ 0.87
CSHL1-208ENST00000558609 A0A0G2JLW4 131 aa20.5■□□□□ 0.87
CSHL1-208ENST00000558609 A1BGP04217 495 aa20.5■□□□□ 0.87
CSHL1-208ENST00000558609 SNRPA1P09661 255 aaKnown RBP20.5■□□□□ 0.87
CSHL1-208ENST00000558609 GPBP1L1Q9HC44 474 aaPredicted RBP20.5■□□□□ 0.87
CSHL1-208ENST00000558609 USP16Q9Y5T5 823 aa20.5■□□□□ 0.87
CSHL1-208ENST00000558609 NFIXQ14938 502 aa20.49■□□□□ 0.87
CSHL1-208ENST00000558609 PNISRQ8TF01 805 aaKnown RBP20.49■□□□□ 0.87
CSHL1-208ENST00000558609 DPEP1P16444 411 aa20.48■□□□□ 0.87
CSHL1-208ENST00000558609 ZNF526Q8TF50 670 aaPredicted RBP20.48■□□□□ 0.87
CSHL1-208ENST00000558609 WWC3Q9ULE0 1092 aa20.48■□□□□ 0.87
CSHL1-208ENST00000558609 N4BP2Q86UW6 1770 aaPredicted RBP20.47■□□□□ 0.87
CSHL1-208ENST00000558609 PRAMEF22A3QJZ6 481 aa20.47■□□□□ 0.87
CSHL1-208ENST00000558609 PRKRIP1Q9H875 184 aaPredicted RBP20.47■□□□□ 0.87
CSHL1-208ENST00000558609 MIS18AQ9NYP9 233 aa20.47■□□□□ 0.87
CSHL1-208ENST00000558609 HSPA6P17066 643 aa20.46■□□□□ 0.87
CSHL1-208ENST00000558609 KCNA3P22001 575 aa20.46■□□□□ 0.87
CSHL1-208ENST00000558609 NPM2Q86SE8 214 aaKnown RBP20.45■□□□□ 0.86
CSHL1-208ENST00000558609 TBC1D2BQ9UPU7 963 aa20.45■□□□□ 0.86
CSHL1-208ENST00000558609 ZNF330Q9Y3S2 320 aaPredicted RBP20.45■□□□□ 0.86
CSHL1-208ENST00000558609 SERPINB2P05120 415 aa20.44■□□□□ 0.86
CSHL1-208ENST00000558609 THUMPD2Q9BTF0 503 aaKnown RBP20.44■□□□□ 0.86
CSHL1-208ENST00000558609 TMPOP42166 694 aaKnown RBP20.43■□□□□ 0.86
CSHL1-208ENST00000558609 RIPK4P57078 832 aa20.43■□□□□ 0.86
CSHL1-208ENST00000558609 BCS1LQ9Y276 419 aa20.43■□□□□ 0.86
CSHL1-208ENST00000558609 NRXN2Q9P2S2 1712 aa20.43■□□□□ 0.86
CSHL1-208ENST00000558609 KDM3BQ7LBC6 1761 aa20.42■□□□□ 0.86
CSHL1-208ENST00000558609 AFDNP55196 1824 aaKnown RBP20.42■□□□□ 0.86
CSHL1-208ENST00000558609 CAMTA2O94983 1202 aa20.42■□□□□ 0.86
CSHL1-208ENST00000558609 WDR43Q15061 677 aaKnown RBP eCLIP20.42■□□□□ 0.86
CSHL1-208ENST00000558609 TBC1D9BQ66K14 1250 aa20.42■□□□□ 0.86
CSHL1-208ENST00000558609 PIM2Q9P1W9 311 aa20.42■□□□□ 0.86
CSHL1-208ENST00000558609 SCN7AQ01118 1682 aa20.42■□□□□ 0.86
CSHL1-208ENST00000558609 BRCA1P38398 1863 aaKnown RBP20.41■□□□□ 0.86
CSHL1-208ENST00000558609 NBPF26B4DH59 902 aa20.41■□□□□ 0.86
CSHL1-208ENST00000558609 PIP4K2AP48426 406 aaPredicted RBP20.41■□□□□ 0.86
CSHL1-208ENST00000558609 EIF4A1P60842 406 aaKnown RBP20.41■□□□□ 0.86
CSHL1-208ENST00000558609 NBPF10Q6P3W6 841 aaKnown RBP20.41■□□□□ 0.86
CSHL1-208ENST00000558609 BICDL1Q6ZP65 573 aa20.41■□□□□ 0.86
CSHL1-208ENST00000558609 DZIP3Q86Y13 1208 aaKnown RBP20.41■□□□□ 0.86
CSHL1-208ENST00000558609 NBPF15Q8N660 670 aa20.41■□□□□ 0.86
CSHL1-208ENST00000558609 KIF3CO14782 793 aa20.4■□□□□ 0.86
CSHL1-208ENST00000558609 CHRNA5P30532 468 aa20.4■□□□□ 0.86
CSHL1-208ENST00000558609 LMOD3Q0VAK6 560 aa20.4■□□□□ 0.86
CSHL1-208ENST00000558609 ADAMTS8Q9UP79 889 aa20.4■□□□□ 0.86
CSHL1-208ENST00000558609 CCDC146Q8IYE0 955 aa20.39■□□□□ 0.85
CSHL1-208ENST00000558609 RUNDC1Q96C34 613 aa20.39■□□□□ 0.85
CSHL1-208ENST00000558609 DALRD3Q5D0E6 543 aaKnown RBP20.38■□□□□ 0.85
CSHL1-208ENST00000558609 CLEC4GQ6UXB4 293 aa20.38■□□□□ 0.85
CSHL1-208ENST00000558609 BABAM1Q9NWV8 329 aa20.38■□□□□ 0.85
CSHL1-208ENST00000558609 CARMIL3Q8ND23 1372 aa20.37■□□□□ 0.85
CSHL1-208ENST00000558609 RGL2O15211 777 aa20.37■□□□□ 0.85
CSHL1-208ENST00000558609 SETDB2Q96T68 719 aa20.37■□□□□ 0.85
CSHL1-208ENST00000558609 LAMB4A4D0S4 1761 aa20.36■□□□□ 0.85
CSHL1-208ENST00000558609 ARHGAP27Q6ZUM4 889 aa20.36■□□□□ 0.85
CSHL1-208ENST00000558609 TSPYL4Q9UJ04 414 aa20.36■□□□□ 0.85
CSHL1-208ENST00000558609 RRP7AQ9Y3A4 280 aaKnown RBP20.36■□□□□ 0.85
CSHL1-208ENST00000558609 ARFGEF1Q9Y6D6 1849 aa20.36■□□□□ 0.85
CSHL1-208ENST00000558609 BCORQ6W2J9 1755 aa20.36■□□□□ 0.85
CSHL1-208ENST00000558609 NEUROD2Q15784 382 aa20.34■□□□□ 0.85
CSHL1-208ENST00000558609 PRR5LQ6MZQ0 368 aa20.34■□□□□ 0.85
CSHL1-208ENST00000558609 BRIP1Q9BX63 1249 aa20.34■□□□□ 0.85
CSHL1-208ENST00000558609 ZNF652Q9Y2D9 606 aa20.34■□□□□ 0.85
CSHL1-208ENST00000558609 H0YIN7 160 aa20.33■□□□□ 0.85
CSHL1-208ENST00000558609 C2CD5Q86YS7 1000 aa20.33■□□□□ 0.85
CSHL1-208ENST00000558609 TRIM35Q9UPQ4 493 aa20.33■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms