RNA–Protein interactions for RNA: ENST00000558500.5

LRRC28-207, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4

Gene LRRC28, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-207ENST00000558500 POTECB2RU33 542 aa9.44□□□□□ -0.9
LRRC28-207ENST00000558500 ERVV-2B6SEH9 535 aa9.44□□□□□ -0.9
LRRC28-207ENST00000558500 POLRMTO00411 1230 aaKnown RBP9.44□□□□□ -0.9
LRRC28-207ENST00000558500 USP42Q9H9J4 1324 aaKnown RBP9.44□□□□□ -0.9
LRRC28-207ENST00000558500 WASHC2AQ641Q2 1341 aa9.43□□□□□ -0.9
LRRC28-207ENST00000558500 FOXN1O15353 648 aa9.43□□□□□ -0.9
LRRC28-207ENST00000558500 PPM1GO15355 546 aaPredicted RBP9.43□□□□□ -0.9
LRRC28-207ENST00000558500 PRDM10Q9NQV6 1147 aa9.43□□□□□ -0.9
LRRC28-207ENST00000558500 CREBZFQ9NS37 354 aa9.43□□□□□ -0.9
LRRC28-207ENST00000558500 MKRN1Q9UHC7 482 aaKnown RBP9.43□□□□□ -0.9
LRRC28-207ENST00000558500 BRCA1P38398 1863 aaKnown RBP9.42□□□□□ -0.9
LRRC28-207ENST00000558500 ARFGEF1Q9Y6D6 1849 aa9.42□□□□□ -0.9
LRRC28-207ENST00000558500 TM4SF1P30408 202 aa9.42□□□□□ -0.9
LRRC28-207ENST00000558500 CRKLP46109 303 aaKnown RBP9.42□□□□□ -0.9
LRRC28-207ENST00000558500 NFKBIEO00221 500 aa9.41□□□□□ -0.9
LRRC28-207ENST00000558500 PTCD1O75127 700 aaKnown RBP9.41□□□□□ -0.9
LRRC28-207ENST00000558500 HSP90AB1P08238 724 aaKnown RBP9.41□□□□□ -0.9
LRRC28-207ENST00000558500 CHADLQ6NUI6 762 aa9.41□□□□□ -0.9
LRRC28-207ENST00000558500 DPY19L2Q6NUT2 758 aa9.41□□□□□ -0.9
LRRC28-207ENST00000558500 SPDYE1Q8NFV5 336 aaPredicted RBP9.41□□□□□ -0.9
LRRC28-207ENST00000558500 PITPNM1O00562 1244 aa9.4□□□□□ -0.9
LRRC28-207ENST00000558500 CTCFP49711 727 aaPredicted RBP9.4□□□□□ -0.9
LRRC28-207ENST00000558500 CABP4P57796 275 aa9.4□□□□□ -0.9
LRRC28-207ENST00000558500 CHRDL2Q6WN34 429 aa9.4□□□□□ -0.9
LRRC28-207ENST00000558500 TTLL6Q8N841 843 aa9.4□□□□□ -0.9
LRRC28-207ENST00000558500 CARD14Q9BXL6 1004 aa9.4□□□□□ -0.9
LRRC28-207ENST00000558500 CNTNAP1P78357 1384 aa9.39□□□□□ -0.91
LRRC28-207ENST00000558500 ZNF831Q5JPB2 1677 aa9.39□□□□□ -0.91
LRRC28-207ENST00000558500 EIF4A2Q14240 407 aaKnown RBP9.39□□□□□ -0.91
LRRC28-207ENST00000558500 USPL1Q5W0Q7 1092 aa9.39□□□□□ -0.91
LRRC28-207ENST00000558500 INTS5Q6P9B9 1019 aaKnown RBP9.39□□□□□ -0.91
LRRC28-207ENST00000558500 AIDAQ96BJ3 306 aa9.39□□□□□ -0.91
LRRC28-207ENST00000558500 PCDH10Q9P2E7 1040 aa9.39□□□□□ -0.91
LRRC28-207ENST00000558500 ZPR1O75312 459 aa9.38□□□□□ -0.91
LRRC28-207ENST00000558500 POTEIP0CG38 1075 aa9.38□□□□□ -0.91
LRRC28-207ENST00000558500 POTEJP0CG39 1038 aa9.38□□□□□ -0.91
LRRC28-207ENST00000558500 NFIXQ14938 502 aa9.38□□□□□ -0.91
LRRC28-207ENST00000558500 FAM161AQ3B820 660 aa9.38□□□□□ -0.91
LRRC28-207ENST00000558500 PLEKHO1Q53GL0 409 aaPredicted RBP9.38□□□□□ -0.91
LRRC28-207ENST00000558500 ABHD8Q96I13 439 aa9.38□□□□□ -0.91
LRRC28-207ENST00000558500 POLKQ9UBT6 870 aa9.38□□□□□ -0.91
LRRC28-207ENST00000558500 COL5A3P25940 1745 aaPredicted RBP9.37□□□□□ -0.91
LRRC28-207ENST00000558500 SERPINB2P05120 415 aa9.37□□□□□ -0.91
LRRC28-207ENST00000558500 VEGFBP49765 207 aa9.37□□□□□ -0.91
LRRC28-207ENST00000558500 LBX1P52954 281 aa9.37□□□□□ -0.91
LRRC28-207ENST00000558500 ZNF530Q6P9A1 599 aaPredicted RBP9.37□□□□□ -0.91
LRRC28-207ENST00000558500 C2CD5Q86YS7 1000 aa9.37□□□□□ -0.91
LRRC28-207ENST00000558500 WBP1LQ9NX94 342 aa9.37□□□□□ -0.91
LRRC28-207ENST00000558500 SOS1Q07889 1333 aaPredicted RBP9.36□□□□□ -0.91
LRRC28-207ENST00000558500 PASKQ96RG2 1323 aa9.36□□□□□ -0.91
LRRC28-207ENST00000558500 H0YIN7 160 aa9.36□□□□□ -0.91
LRRC28-207ENST00000558500 MTHFSP49914 203 aa9.36□□□□□ -0.91
LRRC28-207ENST00000558500 ERFEQ4G0M1 354 aa9.36□□□□□ -0.91
LRRC28-207ENST00000558500 AMOTQ4VCS5 1084 aa9.36□□□□□ -0.91
LRRC28-207ENST00000558500 CDCA8Q53HL2 280 aa9.36□□□□□ -0.91
LRRC28-207ENST00000558500 NFATC2IPQ8NCF5 419 aa9.36□□□□□ -0.91
LRRC28-207ENST00000558500 BCL2L12Q9HB09 334 aa9.36□□□□□ -0.91
LRRC28-207ENST00000558500 NARFQ9UHQ1 456 aa9.36□□□□□ -0.91
LRRC28-207ENST00000558500 SBF1O95248 1867 aa9.36□□□□□ -0.91
LRRC28-207ENST00000558500 DDNO94850 711 aaPredicted RBP9.35□□□□□ -0.91
LRRC28-207ENST00000558500 DNAJC10Q8IXB1 793 aa9.35□□□□□ -0.91
LRRC28-207ENST00000558500 CLEC11AQ9Y240 323 aa9.35□□□□□ -0.91
LRRC28-207ENST00000558500 CARMIL3Q8ND23 1372 aa9.35□□□□□ -0.91
LRRC28-207ENST00000558500 MYH14Q7Z406 1995 aaKnown RBP9.34□□□□□ -0.91
LRRC28-207ENST00000558500 TMEM88BA6NKF7 163 aa9.34□□□□□ -0.91
LRRC28-207ENST00000558500 C21orf2O43822 256 aa9.34□□□□□ -0.91
LRRC28-207ENST00000558500 HSPA8P11142 646 aaKnown RBP9.34□□□□□ -0.91
LRRC28-207ENST00000558500 C1orf141Q5JVX7 400 aa9.34□□□□□ -0.91
LRRC28-207ENST00000558500 LDHDQ86WU2 507 aa9.34□□□□□ -0.91
LRRC28-207ENST00000558500 LTBP3Q9NS15 1303 aa9.33□□□□□ -0.92
LRRC28-207ENST00000558500 IQCA1LA6NCM1 817 aa9.33□□□□□ -0.92
LRRC28-207ENST00000558500 ITGBL1O95965 494 aaPredicted RBP9.33□□□□□ -0.92
LRRC28-207ENST00000558500 CYP19A1P11511 503 aaPredicted RBP9.33□□□□□ -0.92
LRRC28-207ENST00000558500 VASPP50552 380 aaPredicted RBP9.33□□□□□ -0.92
LRRC28-207ENST00000558500 MLLT1Q03111 559 aaPredicted RBP9.33□□□□□ -0.92
LRRC28-207ENST00000558500 TAOK3Q9H2K8 898 aa9.33□□□□□ -0.92
LRRC28-207ENST00000558500 ZBTB1Q9Y2K1 713 aa9.33□□□□□ -0.92
LRRC28-207ENST00000558500 COL15A1P39059 1388 aa9.33□□□□□ -0.92
LRRC28-207ENST00000558500 ANKRD26Q9UPS8 1709 aa9.33□□□□□ -0.92
LRRC28-207ENST00000558500 KIF20BQ96Q89 1820 aa9.33□□□□□ -0.92
LRRC28-207ENST00000558500 ADAMTS7Q9UKP4 1686 aa9.32□□□□□ -0.92
LRRC28-207ENST00000558500 TIAM2Q8IVF5 1701 aa9.32□□□□□ -0.92
LRRC28-207ENST00000558500 RASSF10A6NK89 507 aa9.32□□□□□ -0.92
LRRC28-207ENST00000558500 TNNT2P45379 298 aaPredicted RBP9.32□□□□□ -0.92
LRRC28-207ENST00000558500 RGS19P49795 217 aa9.32□□□□□ -0.92
LRRC28-207ENST00000558500 ZNF622Q969S3 477 aaKnown RBP eCLIP9.32□□□□□ -0.92
LRRC28-207ENST00000558500 L3MBTL3Q96JM7 780 aaPredicted RBP9.32□□□□□ -0.92
LRRC28-207ENST00000558500 BRIP1Q9BX63 1249 aa9.32□□□□□ -0.92
LRRC28-207ENST00000558500 TAF1DQ9H5J8 278 aaPredicted RBP9.32□□□□□ -0.92
LRRC28-207ENST00000558500 PDZRN3Q9UPQ7 1066 aa9.32□□□□□ -0.92
LRRC28-207ENST00000558500 PDE6BP35913 854 aa9.31□□□□□ -0.92
LRRC28-207ENST00000558500 MAP2K1Q02750 393 aaPredicted RBP9.31□□□□□ -0.92
LRRC28-207ENST00000558500 BICDL1Q6ZP65 573 aa9.31□□□□□ -0.92
LRRC28-207ENST00000558500 AEBP1Q8IUX7 1158 aa9.31□□□□□ -0.92
LRRC28-207ENST00000558500 TJP1Q07157 1748 aa9.31□□□□□ -0.92
LRRC28-207ENST00000558500 NRXN2Q9P2S2 1712 aa9.31□□□□□ -0.92
LRRC28-207ENST00000558500 CCDC85CA6NKD9 419 aa9.3□□□□□ -0.92
LRRC28-207ENST00000558500 DEFB115Q30KQ5 88 aa9.3□□□□□ -0.92
LRRC28-207ENST00000558500 SLC52A2Q9HAB3 445 aa9.3□□□□□ -0.92
LRRC28-207ENST00000558500 WDR33Q9C0J8 1336 aaKnown RBP9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms