RNA–Protein interactions for RNA: ENST00000557985.2

TMEM250-204, Transcript of transmembrane protein 250, humanhuman

TSL 1 (best)

Gene TMEM250, Length 1,981 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM250-204ENST00000557985 CACNA1FO60840 1977 aa27.27■■□□□ 1.96
TMEM250-204ENST00000557985 FLIIQ13045 1269 aa27.27■■□□□ 1.96
TMEM250-204ENST00000557985 PROSER3Q2NL68 480 aa27.27■■□□□ 1.96
TMEM250-204ENST00000557985 ZNF772Q68DY9 489 aaPredicted RBP27.27■■□□□ 1.96
TMEM250-204ENST00000557985 ITPRIPQ8IWB1 547 aa27.27■■□□□ 1.96
TMEM250-204ENST00000557985 RBM42Q9BTD8 480 aaKnown RBP27.27■■□□□ 1.96
TMEM250-204ENST00000557985 CHMP4AQ9BY43 222 aa27.27■■□□□ 1.96
TMEM250-204ENST00000557985 MVPQ14764 893 aaKnown RBP27.26■■□□□ 1.95
TMEM250-204ENST00000557985 DBF4Q9UBU7 674 aaPredicted RBP27.26■■□□□ 1.95
TMEM250-204ENST00000557985 PTPRCP08575 1304 aa27.25■■□□□ 1.95
TMEM250-204ENST00000557985 KCPQ6ZWJ8 1503 aa27.25■■□□□ 1.95
TMEM250-204ENST00000557985 PAPPAQ13219 1627 aa27.25■■□□□ 1.95
TMEM250-204ENST00000557985 UBR2Q8IWV8 1755 aa27.24■■□□□ 1.95
TMEM250-204ENST00000557985 F6X3S4 739 aa27.24■■□□□ 1.95
TMEM250-204ENST00000557985 PIP4K2AP48426 406 aaPredicted RBP27.24■■□□□ 1.95
TMEM250-204ENST00000557985 FKBP5Q13451 457 aaPredicted RBP27.24■■□□□ 1.95
TMEM250-204ENST00000557985 CCDC136Q96JN2 1154 aa27.24■■□□□ 1.95
TMEM250-204ENST00000557985 PDIA6Q15084 440 aa27.23■■□□□ 1.95
TMEM250-204ENST00000557985 MYL6BP14649 208 aa27.22■■□□□ 1.95
TMEM250-204ENST00000557985 PTF1AQ7RTS3 328 aa27.22■■□□□ 1.95
TMEM250-204ENST00000557985 ABCC4O15439 1325 aa27.22■■□□□ 1.95
TMEM250-204ENST00000557985 RGS12O14924 1447 aa27.21■■□□□ 1.95
TMEM250-204ENST00000557985 SLC4A10Q6U841 1118 aa27.2■■□□□ 1.95
TMEM250-204ENST00000557985 DDX21Q9NR30 783 aaKnown RBP eCLIP27.2■■□□□ 1.95
TMEM250-204ENST00000557985 RBM6P78332 1123 aaKnown RBP27.19■■□□□ 1.94
TMEM250-204ENST00000557985 SLC4A9Q96Q91 983 aa27.19■■□□□ 1.94
TMEM250-204ENST00000557985 A1BGP04217 495 aa27.18■■□□□ 1.94
TMEM250-204ENST00000557985 AIMP1Q12904 312 aaKnown RBP27.18■■□□□ 1.94
TMEM250-204ENST00000557985 DNAJC10Q8IXB1 793 aa27.18■■□□□ 1.94
TMEM250-204ENST00000557985 HYPKQ9NX55 129 aa27.18■■□□□ 1.94
TMEM250-204ENST00000557985 DDX19BQ9UMR2 479 aa27.18■■□□□ 1.94
TMEM250-204ENST00000557985 RGS17Q9UGC6 210 aaPredicted RBP27.17■■□□□ 1.94
TMEM250-204ENST00000557985 VSIG10Q8N0Z9 540 aa27.15■■□□□ 1.94
TMEM250-204ENST00000557985 NBPF26B4DH59 902 aa27.15■■□□□ 1.94
TMEM250-204ENST00000557985 NBPF14Q5TI25 921 aa27.15■■□□□ 1.94
TMEM250-204ENST00000557985 INTS3Q68E01 1043 aaKnown RBP27.15■■□□□ 1.94
TMEM250-204ENST00000557985 NBPF10Q6P3W6 841 aaKnown RBP27.15■■□□□ 1.94
TMEM250-204ENST00000557985 NBPF15Q8N660 670 aa27.15■■□□□ 1.94
TMEM250-204ENST00000557985 PI4KAP2A4QPH2 592 aa27.14■■□□□ 1.94
TMEM250-204ENST00000557985 PI4KAP1Q8N8J0 262 aa27.14■■□□□ 1.94
TMEM250-204ENST00000557985 BRWD3Q6RI45 1802 aa27.14■■□□□ 1.93
TMEM250-204ENST00000557985 ZBTB7BO15156 539 aaPredicted RBP27.13■■□□□ 1.93
TMEM250-204ENST00000557985 KRT27Q7Z3Y8 459 aa27.13■■□□□ 1.93
TMEM250-204ENST00000557985 RXRBP28702 533 aa27.13■■□□□ 1.93
TMEM250-204ENST00000557985 COPS6Q7L5N1 327 aa27.13■■□□□ 1.93
TMEM250-204ENST00000557985 XAGE3Q8WTP9 111 aa27.12■■□□□ 1.93
TMEM250-204ENST00000557985 TEX13AQ9BXU3 409 aaPredicted RBP27.12■■□□□ 1.93
TMEM250-204ENST00000557985 LRP10Q7Z4F1 713 aa27.11■■□□□ 1.93
TMEM250-204ENST00000557985 LAMB4A4D0S4 1761 aa27.11■■□□□ 1.93
TMEM250-204ENST00000557985 ZBTB40Q9NUA8 1239 aa27.11■■□□□ 1.93
TMEM250-204ENST00000557985 PCDHB15Q9Y5E8 787 aa27.11■■□□□ 1.93
TMEM250-204ENST00000557985 LOC102724428A0A0B4J2F2 783 aa27.09■■□□□ 1.93
TMEM250-204ENST00000557985 STARD3NLO95772 234 aa27.09■■□□□ 1.93
TMEM250-204ENST00000557985 ATP6V1AP38606 617 aa27.09■■□□□ 1.93
TMEM250-204ENST00000557985 SIK1P57059 783 aa27.09■■□□□ 1.93
TMEM250-204ENST00000557985 POTEAQ6S8J7 498 aa27.09■■□□□ 1.93
TMEM250-204ENST00000557985 PALLDQ8WX93 1383 aa27.09■■□□□ 1.93
TMEM250-204ENST00000557985 MAP3K2Q9Y2U5 619 aa27.09■■□□□ 1.93
TMEM250-204ENST00000557985 CCT4P50991 539 aaKnown RBP27.08■■□□□ 1.93
TMEM250-204ENST00000557985 KSR2Q6VAB6 950 aa27.08■■□□□ 1.93
TMEM250-204ENST00000557985 DNAAF4Q8WXU2 420 aa27.08■■□□□ 1.93
TMEM250-204ENST00000557985 SMARCC1Q92922 1105 aaPredicted RBP27.08■■□□□ 1.93
TMEM250-204ENST00000557985 ADCY9O60503 1353 aa27.08■■□□□ 1.93
TMEM250-204ENST00000557985 CYP19A1P11511 503 aaPredicted RBP27.08■■□□□ 1.92
TMEM250-204ENST00000557985 EP400Q96L91 3159 aa27.07■■□□□ 1.92
TMEM250-204ENST00000557985 SBF2Q86WG5 1849 aa27.07■■□□□ 1.92
TMEM250-204ENST00000557985 KCNQ4P56696 695 aa27.06■■□□□ 1.92
TMEM250-204ENST00000557985 AAMPQ13685 434 aa27.06■■□□□ 1.92
TMEM250-204ENST00000557985 C1orf115Q9H7X2 142 aa27.06■■□□□ 1.92
TMEM250-204ENST00000557985 ZNF330Q9Y3S2 320 aaPredicted RBP27.06■■□□□ 1.92
TMEM250-204ENST00000557985 ERBB4Q15303 1308 aa27.06■■□□□ 1.92
TMEM250-204ENST00000557985 DDX58O95786 925 aaKnown RBP27.06■■□□□ 1.92
TMEM250-204ENST00000557985 RIC3Q7Z5B4 369 aa27.06■■□□□ 1.92
TMEM250-204ENST00000557985 ITPK1Q13572 414 aa27.05■■□□□ 1.92
TMEM250-204ENST00000557985 IGHDP01880 384 aa27.04■■□□□ 1.92
TMEM250-204ENST00000557985 FAM196AQ6ZSG2 479 aa27.04■■□□□ 1.92
TMEM250-204ENST00000557985 ANKRD13DQ6ZTN6 518 aa27.04■■□□□ 1.92
TMEM250-204ENST00000557985 BTAF1O14981 1849 aa27.04■■□□□ 1.92
TMEM250-204ENST00000557985 MEIS3Q99687 375 aa27.04■■□□□ 1.92
TMEM250-204ENST00000557985 TTLL7Q6ZT98 887 aa27.03■■□□□ 1.92
TMEM250-204ENST00000557985 NHSQ6T4R5 1651 aa27.03■■□□□ 1.92
TMEM250-204ENST00000557985 BEND3Q5T5X7 828 aa27.02■■□□□ 1.92
TMEM250-204ENST00000557985 CHMP4BQ9H444 224 aaKnown RBP27.02■■□□□ 1.92
TMEM250-204ENST00000557985 SRCIN1Q9C0H9 1055 aa27.02■■□□□ 1.92
TMEM250-204ENST00000557985 TJP1Q07157 1748 aa27.02■■□□□ 1.92
TMEM250-204ENST00000557985 TRIM37O94972 964 aa27■■□□□ 1.91
TMEM250-204ENST00000557985 ARXQ96QS3 562 aa27■■□□□ 1.91
TMEM250-204ENST00000557985 BCL11BQ9C0K0 894 aaPredicted RBP27■■□□□ 1.91
TMEM250-204ENST00000557985 ZBTB1Q9Y2K1 713 aa27■■□□□ 1.91
TMEM250-204ENST00000557985 CWF19L2Q2TBE0 894 aaKnown RBP26.98■■□□□ 1.91
TMEM250-204ENST00000557985 USP44Q9H0E7 712 aa26.98■■□□□ 1.91
TMEM250-204ENST00000557985 CRKLP46109 303 aaKnown RBP26.97■■□□□ 1.91
TMEM250-204ENST00000557985 INTS5Q6P9B9 1019 aaKnown RBP26.97■■□□□ 1.91
TMEM250-204ENST00000557985 PLBD2Q8NHP8 589 aa26.97■■□□□ 1.91
TMEM250-204ENST00000557985 ZBTB3Q9H5J0 574 aa26.97■■□□□ 1.91
TMEM250-204ENST00000557985 MYD88Q99836 296 aa26.97■■□□□ 1.91
TMEM250-204ENST00000557985 METTL22Q9BUU2 404 aaPredicted RBP26.96■■□□□ 1.91
TMEM250-204ENST00000557985 PXDNLA1KZ92 1463 aa26.96■■□□□ 1.91
TMEM250-204ENST00000557985 KDM2BQ8NHM5 1336 aa26.95■■□□□ 1.91
TMEM250-204ENST00000557985 CCDC87Q9NVE4 849 aa26.95■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms