RNA–Protein interactions for RNA: ENST00000557849.1

INO80-203, Transcript of INO80 complex subunit, humanhuman

TSL 5

Gene INO80, Length 599 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
INO80-203ENST00000557849 AKAP4Q5JQC9 854 aa11.82□□□□□ -0.52
INO80-203ENST00000557849 BCL2L12Q9HB09 334 aa11.82□□□□□ -0.52
INO80-203ENST00000557849 PIM2Q9P1W9 311 aa11.82□□□□□ -0.52
INO80-203ENST00000557849 ANKRD31Q8N7Z5 1873 aa11.82□□□□□ -0.52
INO80-203ENST00000557849 PER1O15534 1290 aaPredicted RBP11.81□□□□□ -0.52
INO80-203ENST00000557849 HMOX1P09601 288 aa11.81□□□□□ -0.52
INO80-203ENST00000557849 HTRA3P83110 453 aa11.81□□□□□ -0.52
INO80-203ENST00000557849 USPL1Q5W0Q7 1092 aa11.81□□□□□ -0.52
INO80-203ENST00000557849 COL3A1P02461 1466 aaPredicted RBP11.81□□□□□ -0.52
INO80-203ENST00000557849 KIF7Q2M1P5 1343 aa11.81□□□□□ -0.52
INO80-203ENST00000557849 TNRC6CQ9HCJ0 1690 aaKnown RBP11.81□□□□□ -0.52
INO80-203ENST00000557849 APLP1P51693 650 aa11.8□□□□□ -0.52
INO80-203ENST00000557849 NFIXQ14938 502 aa11.8□□□□□ -0.52
INO80-203ENST00000557849 MTHFSDQ2M296 383 aaKnown RBP11.8□□□□□ -0.52
INO80-203ENST00000557849 DALRD3Q5D0E6 543 aaKnown RBP11.8□□□□□ -0.52
INO80-203ENST00000557849 ZBTB1Q9Y2K1 713 aa11.8□□□□□ -0.52
INO80-203ENST00000557849 KNSTRNQ9Y448 316 aa11.8□□□□□ -0.52
INO80-203ENST00000557849 CARMIL3Q8ND23 1372 aa11.79□□□□□ -0.52
INO80-203ENST00000557849 COL15A1P39059 1388 aa11.79□□□□□ -0.52
INO80-203ENST00000557849 COL11A2P13942 1736 aaPredicted RBP11.78□□□□□ -0.52
INO80-203ENST00000557849 TIAM2Q8IVF5 1701 aa11.78□□□□□ -0.52
INO80-203ENST00000557849 RASSF7Q02833 373 aa11.78□□□□□ -0.52
INO80-203ENST00000557849 RBM46Q8TBY0 533 aaKnown RBP11.78□□□□□ -0.52
INO80-203ENST00000557849 RNF181Q9P0P0 153 aa11.78□□□□□ -0.52
INO80-203ENST00000557849 NARFQ9UHQ1 456 aa11.78□□□□□ -0.52
INO80-203ENST00000557849 RRAGCQ9HB90 399 aa11.77□□□□□ -0.53
INO80-203ENST00000557849 SCN7AQ01118 1682 aa11.77□□□□□ -0.53
INO80-203ENST00000557849 ZPR1O75312 459 aa11.76□□□□□ -0.53
INO80-203ENST00000557849 FER1L6Q2WGJ9 1857 aa11.76□□□□□ -0.53
INO80-203ENST00000557849 DICER1Q9UPY3 1922 aaKnown RBP11.76□□□□□ -0.53
INO80-203ENST00000557849 CACNA1SQ13698 1873 aa11.75□□□□□ -0.53
INO80-203ENST00000557849 SERPINB2P05120 415 aa11.75□□□□□ -0.53
INO80-203ENST00000557849 EIF5P55010 431 aaKnown RBP11.75□□□□□ -0.53
INO80-203ENST00000557849 VSIG10Q8N0Z9 540 aa11.75□□□□□ -0.53
INO80-203ENST00000557849 IL17REQ8NFR9 667 aa11.75□□□□□ -0.53
INO80-203ENST00000557849 NFKBIEO00221 500 aa11.74□□□□□ -0.53
INO80-203ENST00000557849 DIAPH1O60610 1272 aaKnown RBP11.74□□□□□ -0.53
INO80-203ENST00000557849 CANXP27824 592 aaKnown RBP11.74□□□□□ -0.53
INO80-203ENST00000557849 CC2D1BQ5T0F9 858 aaKnown RBP11.74□□□□□ -0.53
INO80-203ENST00000557849 ZNF496Q96IT1 587 aaPredicted RBP11.74□□□□□ -0.53
INO80-203ENST00000557849 SLX4Q8IY92 1834 aa11.74□□□□□ -0.53
INO80-203ENST00000557849 POTECB2RU33 542 aa11.73□□□□□ -0.53
INO80-203ENST00000557849 FSTL1Q12841 308 aa11.73□□□□□ -0.53
INO80-203ENST00000557849 TBC1D9BQ66K14 1250 aa11.73□□□□□ -0.53
INO80-203ENST00000557849 BCORQ6W2J9 1755 aa11.73□□□□□ -0.53
INO80-203ENST00000557849 JMYQ8N9B5 988 aa11.73□□□□□ -0.53
INO80-203ENST00000557849 KDM2BQ8NHM5 1336 aa11.73□□□□□ -0.53
INO80-203ENST00000557849 KLRG1Q96E93 195 aa11.73□□□□□ -0.53
INO80-203ENST00000557849 HEG1Q9ULI3 1381 aa11.72□□□□□ -0.53
INO80-203ENST00000557849 BICDL1Q6ZP65 573 aa11.72□□□□□ -0.53
INO80-203ENST00000557849 CCDC24Q8N4L8 307 aa11.72□□□□□ -0.53
INO80-203ENST00000557849 CCER1Q8TC90 406 aaPredicted RBP11.72□□□□□ -0.53
INO80-203ENST00000557849 CEMIPQ8WUJ3 1361 aa11.71□□□□□ -0.53
INO80-203ENST00000557849 KCNQ3O43525 872 aa11.71□□□□□ -0.53
INO80-203ENST00000557849 LMNB1P20700 586 aa11.71□□□□□ -0.53
INO80-203ENST00000557849 ZNF790Q6PG37 636 aa11.71□□□□□ -0.53
INO80-203ENST00000557849 C2CD5Q86YS7 1000 aa11.71□□□□□ -0.53
INO80-203ENST00000557849 TTLL6Q8N841 843 aa11.71□□□□□ -0.53
INO80-203ENST00000557849 PHACTR3Q96KR7 559 aa11.71□□□□□ -0.53
INO80-203ENST00000557849 ARFGEF2Q9Y6D5 1785 aa11.71□□□□□ -0.54
INO80-203ENST00000557849 NPC1L1Q9UHC9 1359 aa11.7□□□□□ -0.54
INO80-203ENST00000557849 ZC3H4Q9UPT8 1303 aaKnown RBP11.7□□□□□ -0.54
INO80-203ENST00000557849 GLTPD2A6NH11 291 aa11.7□□□□□ -0.54
INO80-203ENST00000557849 COL13A1Q5TAT6 717 aaPredicted RBP11.7□□□□□ -0.54
INO80-203ENST00000557849 PRR5LQ6MZQ0 368 aa11.7□□□□□ -0.54
INO80-203ENST00000557849 C16orf71Q8IYS4 520 aaPredicted RBP11.7□□□□□ -0.54
INO80-203ENST00000557849 TBC1D2BQ9UPU7 963 aa11.7□□□□□ -0.54
INO80-203ENST00000557849 CAMTA2O94983 1202 aa11.69□□□□□ -0.54
INO80-203ENST00000557849 STARD3NLO95772 234 aa11.69□□□□□ -0.54
INO80-203ENST00000557849 A1BGP04217 495 aa11.69□□□□□ -0.54
INO80-203ENST00000557849 PRAMEF22A3QJZ6 481 aa11.68□□□□□ -0.54
INO80-203ENST00000557849 GNAT3A8MTJ3 354 aa11.68□□□□□ -0.54
INO80-203ENST00000557849 H0YIN7 160 aa11.68□□□□□ -0.54
INO80-203ENST00000557849 CNGB1Q14028 1251 aaPredicted RBP11.68□□□□□ -0.54
INO80-203ENST00000557849 SMC1BQ8NDV3 1235 aa11.68□□□□□ -0.54
INO80-203ENST00000557849 U2SURPO15042 1029 aaKnown RBP11.67□□□□□ -0.54
INO80-203ENST00000557849 C21orf2O43822 256 aa11.67□□□□□ -0.54
INO80-203ENST00000557849 VEGFAP15692 232 aaPredicted RBP11.67□□□□□ -0.54
INO80-203ENST00000557849 IL6STP40189 918 aaPredicted RBP11.67□□□□□ -0.54
INO80-203ENST00000557849 PIP4K2AP48426 406 aaPredicted RBP11.67□□□□□ -0.54
INO80-203ENST00000557849 TTC5Q8N0Z6 440 aa11.67□□□□□ -0.54
INO80-203ENST00000557849 BRIP1Q9BX63 1249 aa11.67□□□□□ -0.54
INO80-203ENST00000557849 RSPH6AQ9H0K4 717 aa11.67□□□□□ -0.54
INO80-203ENST00000557849 ZNF219Q9P2Y4 722 aaPredicted RBP11.67□□□□□ -0.54
INO80-203ENST00000557849 A0A087WZG4 1122 aa11.66□□□□□ -0.54
INO80-203ENST00000557849 TEFQ10587 303 aa11.66□□□□□ -0.54
INO80-203ENST00000557849 GAS2L2Q8NHY3 880 aa11.66□□□□□ -0.54
INO80-203ENST00000557849 ZNF622Q969S3 477 aaKnown RBP eCLIP11.66□□□□□ -0.54
INO80-203ENST00000557849 USP16Q9Y5T5 823 aa11.66□□□□□ -0.54
INO80-203ENST00000557849 POTEIP0CG38 1075 aa11.65□□□□□ -0.54
INO80-203ENST00000557849 POTEJP0CG39 1038 aa11.65□□□□□ -0.54
INO80-203ENST00000557849 PRKAR2BP31323 418 aa11.65□□□□□ -0.54
INO80-203ENST00000557849 FMNL2Q96PY5 1086 aa11.65□□□□□ -0.54
INO80-203ENST00000557849 ZNF330Q9Y3S2 320 aaPredicted RBP11.65□□□□□ -0.54
INO80-203ENST00000557849 DLG5Q8TDM6 1919 aa11.64□□□□□ -0.55
INO80-203ENST00000557849 SRGNP10124 158 aa11.64□□□□□ -0.55
INO80-203ENST00000557849 PDE6BP35913 854 aa11.64□□□□□ -0.55
INO80-203ENST00000557849 C7orf43Q8WVR3 580 aa11.64□□□□□ -0.55
INO80-203ENST00000557849 TEX13AQ9BXU3 409 aaPredicted RBP11.64□□□□□ -0.55
INO80-203ENST00000557849 LTBP3Q9NS15 1303 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms