RNA–Protein interactions for RNA: ENST00000557749.5

LINC00648-204, long intergenic non-protein coding RNA 648, humanhuman

TSL 5 BASIC

Gene LINC00648, Length 443 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00648-204ENST00000557749 MTHFSP49914 203 aa15.38■□□□□ 0.05
LINC00648-204ENST00000557749 PLCB2Q00722 1185 aa15.38■□□□□ 0.05
LINC00648-204ENST00000557749 LRRC4BQ9NT99 713 aa15.38■□□□□ 0.05
LINC00648-204ENST00000557749 TFCP2L1Q9NZI6 479 aa15.38■□□□□ 0.05
LINC00648-204ENST00000557749 DIAPH1O60610 1272 aaKnown RBP15.37■□□□□ 0.05
LINC00648-204ENST00000557749 IL13P35225 146 aa15.37■□□□□ 0.05
LINC00648-204ENST00000557749 SULT6B1Q6IMI4 303 aa15.37■□□□□ 0.05
LINC00648-204ENST00000557749 CFAP53Q96M91 514 aa15.37■□□□□ 0.05
LINC00648-204ENST00000557749 ZNF530Q6P9A1 599 aaPredicted RBP15.36■□□□□ 0.05
LINC00648-204ENST00000557749 CFAP44Q96MT7 982 aa15.36■□□□□ 0.05
LINC00648-204ENST00000557749 ITGB4P16144 1822 aa15.36■□□□□ 0.05
LINC00648-204ENST00000557749 ZBTB7AO95365 584 aa15.35■□□□□ 0.05
LINC00648-204ENST00000557749 POLD1P28340 1107 aa15.35■□□□□ 0.05
LINC00648-204ENST00000557749 TOGARAM1Q9Y4F4 1720 aa15.34■□□□□ 0.05
LINC00648-204ENST00000557749 ZNF827Q17R98 1081 aa15.34■□□□□ 0.05
LINC00648-204ENST00000557749 PIGBQ92521 554 aa15.34■□□□□ 0.05
LINC00648-204ENST00000557749 TMEM121BQ9BXQ6 578 aaPredicted RBP15.34■□□□□ 0.05
LINC00648-204ENST00000557749 C5P01031 1676 aa15.33■□□□□ 0.04
LINC00648-204ENST00000557749 CABP4P57796 275 aa15.32■□□□□ 0.04
LINC00648-204ENST00000557749 AKAP4Q5JQC9 854 aa15.32■□□□□ 0.04
LINC00648-204ENST00000557749 AK7Q96M32 723 aa15.32■□□□□ 0.04
LINC00648-204ENST00000557749 NUDCQ9Y266 331 aa15.32■□□□□ 0.04
LINC00648-204ENST00000557749 PNPLA7Q6ZV29 1317 aa15.32■□□□□ 0.04
LINC00648-204ENST00000557749 LOC102724428A0A0B4J2F2 783 aa15.31■□□□□ 0.04
LINC00648-204ENST00000557749 PTGER2P43116 358 aa15.31■□□□□ 0.04
LINC00648-204ENST00000557749 SIK1P57059 783 aa15.31■□□□□ 0.04
LINC00648-204ENST00000557749 AEBP1Q8IUX7 1158 aa15.31■□□□□ 0.04
LINC00648-204ENST00000557749 MAP3K5Q99683 1374 aa15.3■□□□□ 0.04
LINC00648-204ENST00000557749 RYDENQ9NUL5 291 aaKnown RBP15.3■□□□□ 0.04
LINC00648-204ENST00000557749 ARXQ96QS3 562 aa15.29■□□□□ 0.04
LINC00648-204ENST00000557749 TAF1LQ8IZX4 1826 aa15.29■□□□□ 0.04
LINC00648-204ENST00000557749 ZNF831Q5JPB2 1677 aa15.28■□□□□ 0.04
LINC00648-204ENST00000557749 SSFA2P28290 1259 aa15.28■□□□□ 0.04
LINC00648-204ENST00000557749 ATP6V1AP38606 617 aa15.28■□□□□ 0.04
LINC00648-204ENST00000557749 GAS2L2Q8NHY3 880 aa15.28■□□□□ 0.04
LINC00648-204ENST00000557749 PDGFDQ9GZP0 370 aaPredicted RBP15.28■□□□□ 0.04
LINC00648-204ENST00000557749 BOLA1Q9Y3E2 137 aa15.28■□□□□ 0.04
LINC00648-204ENST00000557749 C4BP0C0L5 1744 aa15.28■□□□□ 0.04
LINC00648-204ENST00000557749 KDM6AO15550 1401 aaPredicted RBP15.27■□□□□ 0.04
LINC00648-204ENST00000557749 U2SURPO15042 1029 aaKnown RBP15.27■□□□□ 0.04
LINC00648-204ENST00000557749 MICALL2Q8IY33 904 aa15.27■□□□□ 0.04
LINC00648-204ENST00000557749 ATG3Q9NT62 314 aa15.27■□□□□ 0.04
LINC00648-204ENST00000557749 ASAP1Q9ULH1 1129 aa15.27■□□□□ 0.04
LINC00648-204ENST00000557749 COL3A1P02461 1466 aaPredicted RBP15.27■□□□□ 0.03
LINC00648-204ENST00000557749 HMOX1P09601 288 aa15.26■□□□□ 0.03
LINC00648-204ENST00000557749 KCNQ4P56696 695 aa15.26■□□□□ 0.03
LINC00648-204ENST00000557749 TUBGCP6Q96RT7 1819 aa15.25■□□□□ 0.03
LINC00648-204ENST00000557749 NEFMP07197 916 aa15.25■□□□□ 0.03
LINC00648-204ENST00000557749 COL24A1Q17RW2 1714 aa15.25■□□□□ 0.03
LINC00648-204ENST00000557749 SCN11AQ9UI33 1791 aa15.24■□□□□ 0.03
LINC00648-204ENST00000557749 CNGB1Q14028 1251 aaPredicted RBP15.24■□□□□ 0.03
LINC00648-204ENST00000557749 RC3H1Q5TC82 1133 aaKnown RBP15.24■□□□□ 0.03
LINC00648-204ENST00000557749 FHDC1Q9C0D6 1143 aaPredicted RBP15.24■□□□□ 0.03
LINC00648-204ENST00000557749 CNTNAP4Q9C0A0 1308 aa15.23■□□□□ 0.03
LINC00648-204ENST00000557749 MRC1P22897 1456 aa15.23■□□□□ 0.03
LINC00648-204ENST00000557749 PPP2R1AP30153 589 aa15.23■□□□□ 0.03
LINC00648-204ENST00000557749 ZEB1P37275 1124 aaPredicted RBP15.23■□□□□ 0.03
LINC00648-204ENST00000557749 COL23A1Q86Y22 540 aaPredicted RBP15.23■□□□□ 0.03
LINC00648-204ENST00000557749 NFATC2IPQ8NCF5 419 aa15.23■□□□□ 0.03
LINC00648-204ENST00000557749 SYT17Q9BSW7 474 aa15.23■□□□□ 0.03
LINC00648-204ENST00000557749 SLC52A2Q9HAB3 445 aa15.23■□□□□ 0.03
LINC00648-204ENST00000557749 RTCBQ9Y3I0 505 aaKnown RBP15.23■□□□□ 0.03
LINC00648-204ENST00000557749 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.22■□□□□ 0.03
LINC00648-204ENST00000557749 GNPATO15228 680 aa15.22■□□□□ 0.03
LINC00648-204ENST00000557749 L3MBTL3Q96JM7 780 aaPredicted RBP15.22■□□□□ 0.03
LINC00648-204ENST00000557749 PNNQ9H307 717 aaKnown RBP15.22■□□□□ 0.03
LINC00648-204ENST00000557749 TSHZ2Q9NRE2 1034 aa15.22■□□□□ 0.03
LINC00648-204ENST00000557749 UBR3Q6ZT12 1888 aa15.21■□□□□ 0.03
LINC00648-204ENST00000557749 GNAT3A8MTJ3 354 aa15.21■□□□□ 0.03
LINC00648-204ENST00000557749 RNMTO43148 476 aaKnown RBP15.21■□□□□ 0.03
LINC00648-204ENST00000557749 FCHSD2O94868 740 aa15.21■□□□□ 0.03
LINC00648-204ENST00000557749 MTHFSDQ2M296 383 aaKnown RBP15.21■□□□□ 0.03
LINC00648-204ENST00000557749 LHX8Q68G74 356 aa15.21■□□□□ 0.03
LINC00648-204ENST00000557749 LINC00116Q8NCU8 138 aa15.21■□□□□ 0.03
LINC00648-204ENST00000557749 CICQ96RK0 1608 aaPredicted RBP15.21■□□□□ 0.02
LINC00648-204ENST00000557749 TEFQ10587 303 aa15.2■□□□□ 0.02
LINC00648-204ENST00000557749 ITPK1Q13572 414 aa15.2■□□□□ 0.02
LINC00648-204ENST00000557749 RALBP1Q15311 655 aa15.2■□□□□ 0.02
LINC00648-204ENST00000557749 ADAMTS7Q9UKP4 1686 aa15.19■□□□□ 0.02
LINC00648-204ENST00000557749 PHF14O94880 888 aa15.19■□□□□ 0.02
LINC00648-204ENST00000557749 U2AF1L5P0DN76 240 aaPredicted RBP15.19■□□□□ 0.02
LINC00648-204ENST00000557749 U2AF1Q01081 240 aaKnown RBP eCLIP15.19■□□□□ 0.02
LINC00648-204ENST00000557749 TRAPPC3LQ5T215 181 aa15.19■□□□□ 0.02
LINC00648-204ENST00000557749 TMEM92Q6UXU6 159 aa15.19■□□□□ 0.02
LINC00648-204ENST00000557749 TTC5Q8N0Z6 440 aa15.19■□□□□ 0.02
LINC00648-204ENST00000557749 PTCD1O75127 700 aaKnown RBP15.18■□□□□ 0.02
LINC00648-204ENST00000557749 PRKAR2BP31323 418 aa15.18■□□□□ 0.02
LINC00648-204ENST00000557749 VSIG10Q8N0Z9 540 aa15.18■□□□□ 0.02
LINC00648-204ENST00000557749 RTF1Q92541 710 aaKnown RBP15.18■□□□□ 0.02
LINC00648-204ENST00000557749 CD2APQ9Y5K6 639 aa15.18■□□□□ 0.02
LINC00648-204ENST00000557749 COL5A3P25940 1745 aaPredicted RBP15.17■□□□□ 0.02
LINC00648-204ENST00000557749 RPS6KA4O75676 772 aa15.17■□□□□ 0.02
LINC00648-204ENST00000557749 NLGN1Q8N2Q7 840 aa15.17■□□□□ 0.02
LINC00648-204ENST00000557749 OTUD5Q96G74 571 aa15.17■□□□□ 0.02
LINC00648-204ENST00000557749 RSPH6AQ9H0K4 717 aa15.17■□□□□ 0.02
LINC00648-204ENST00000557749 HTATSF1O43719 755 aaKnown RBP15.16■□□□□ 0.02
LINC00648-204ENST00000557749 RFC4P35249 363 aa15.16■□□□□ 0.02
LINC00648-204ENST00000557749 TEX13AQ9BXU3 409 aaPredicted RBP15.16■□□□□ 0.02
LINC00648-204ENST00000557749 LGR6Q9HBX8 967 aa15.15■□□□□ 0.02
LINC00648-204ENST00000557749 VIRMAQ69YN4 1812 aaKnown RBP15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms