RNA–Protein interactions for RNA: ENST00000557726.1

RDH11-211, Transcript of retinol dehydrogenase 11, humanhuman

TSL 3

Gene RDH11, Length 621 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-211ENST00000557726 TEFQ10587 303 aa17.19■□□□□ 0.34
RDH11-211ENST00000557726 VSIG10Q8N0Z9 540 aa17.19■□□□□ 0.34
RDH11-211ENST00000557726 NARFQ9UHQ1 456 aa17.19■□□□□ 0.34
RDH11-211ENST00000557726 ZBTB1Q9Y2K1 713 aa17.19■□□□□ 0.34
RDH11-211ENST00000557726 ADAMTS7Q9UKP4 1686 aa17.19■□□□□ 0.34
RDH11-211ENST00000557726 KIF3CO14782 793 aa17.18■□□□□ 0.34
RDH11-211ENST00000557726 CHRNA5P30532 468 aa17.18■□□□□ 0.34
RDH11-211ENST00000557726 GAS2L2Q8NHY3 880 aa17.18■□□□□ 0.34
RDH11-211ENST00000557726 GNAT3A8MTJ3 354 aa17.17■□□□□ 0.34
RDH11-211ENST00000557726 STARD3NLO95772 234 aa17.17■□□□□ 0.34
RDH11-211ENST00000557726 C9orf131Q5VYM1 1079 aa17.17■□□□□ 0.34
RDH11-211ENST00000557726 CFAP53Q96M91 514 aa17.17■□□□□ 0.34
RDH11-211ENST00000557726 COL3A1P02461 1466 aaPredicted RBP17.17■□□□□ 0.34
RDH11-211ENST00000557726 AFDNP55196 1824 aaKnown RBP17.17■□□□□ 0.34
RDH11-211ENST00000557726 UBR2Q8IWV8 1755 aa17.16■□□□□ 0.34
RDH11-211ENST00000557726 NFIXQ14938 502 aa17.16■□□□□ 0.34
RDH11-211ENST00000557726 ZNF330Q9Y3S2 320 aaPredicted RBP17.15■□□□□ 0.34
RDH11-211ENST00000557726 A0A087WZG4 1122 aa17.14■□□□□ 0.33
RDH11-211ENST00000557726 SERPINB2P05120 415 aa17.14■□□□□ 0.33
RDH11-211ENST00000557726 ZNF790Q6PG37 636 aa17.14■□□□□ 0.33
RDH11-211ENST00000557726 IL17REQ8NFR9 667 aa17.14■□□□□ 0.33
RDH11-211ENST00000557726 ZNF496Q96IT1 587 aaPredicted RBP17.14■□□□□ 0.33
RDH11-211ENST00000557726 BICDL1Q6ZP65 573 aa17.13■□□□□ 0.33
RDH11-211ENST00000557726 TEX13AQ9BXU3 409 aaPredicted RBP17.13■□□□□ 0.33
RDH11-211ENST00000557726 NMRK2Q9NPI5 230 aa17.13■□□□□ 0.33
RDH11-211ENST00000557726 RNF181Q9P0P0 153 aa17.13■□□□□ 0.33
RDH11-211ENST00000557726 NUDCQ9Y266 331 aa17.13■□□□□ 0.33
RDH11-211ENST00000557726 TOMM70O94826 608 aa17.12■□□□□ 0.33
RDH11-211ENST00000557726 PRKAR2BP31323 418 aa17.12■□□□□ 0.33
RDH11-211ENST00000557726 NPM2Q86SE8 214 aaKnown RBP17.12■□□□□ 0.33
RDH11-211ENST00000557726 BCL2L12Q9HB09 334 aa17.12■□□□□ 0.33
RDH11-211ENST00000557726 HEG1Q9ULI3 1381 aa17.12■□□□□ 0.33
RDH11-211ENST00000557726 SBF1O95248 1867 aa17.12■□□□□ 0.33
RDH11-211ENST00000557726 SIPA1L3O60292 1781 aaPredicted RBP17.11■□□□□ 0.33
RDH11-211ENST00000557726 EIF5P55010 431 aaKnown RBP17.11■□□□□ 0.33
RDH11-211ENST00000557726 C16orf71Q8IYS4 520 aaPredicted RBP17.11■□□□□ 0.33
RDH11-211ENST00000557726 FMNL2Q96PY5 1086 aa17.11■□□□□ 0.33
RDH11-211ENST00000557726 NRXN2Q9P2S2 1712 aa17.1■□□□□ 0.33
RDH11-211ENST00000557726 C2CD5Q86YS7 1000 aa17.1■□□□□ 0.33
RDH11-211ENST00000557726 PHACTR3Q96KR7 559 aa17.1■□□□□ 0.33
RDH11-211ENST00000557726 BTBD11A6QL63 1104 aa17.09■□□□□ 0.33
RDH11-211ENST00000557726 U2AF1L5P0DN76 240 aaPredicted RBP17.09■□□□□ 0.33
RDH11-211ENST00000557726 U2AF1Q01081 240 aaKnown RBP eCLIP17.09■□□□□ 0.33
RDH11-211ENST00000557726 TTLL6Q8N841 843 aa17.09■□□□□ 0.33
RDH11-211ENST00000557726 RSPH6AQ9H0K4 717 aa17.09■□□□□ 0.33
RDH11-211ENST00000557726 TBC1D2BQ9UPU7 963 aa17.09■□□□□ 0.33
RDH11-211ENST00000557726 KDM2BQ8NHM5 1336 aa17.09■□□□□ 0.33
RDH11-211ENST00000557726 H0YIN7 160 aa17.08■□□□□ 0.32
RDH11-211ENST00000557726 APLP1P51693 650 aa17.08■□□□□ 0.32
RDH11-211ENST00000557726 RTF1Q92541 710 aaKnown RBP17.08■□□□□ 0.32
RDH11-211ENST00000557726 DLEC1Q9Y238 1755 aa17.07■□□□□ 0.32
RDH11-211ENST00000557726 CEMIPQ8WUJ3 1361 aa17.07■□□□□ 0.32
RDH11-211ENST00000557726 A1BGP04217 495 aa17.07■□□□□ 0.32
RDH11-211ENST00000557726 IL6STP40189 918 aaPredicted RBP17.07■□□□□ 0.32
RDH11-211ENST00000557726 RASSF7Q02833 373 aa17.07■□□□□ 0.32
RDH11-211ENST00000557726 TBC1D9BQ66K14 1250 aa17.07■□□□□ 0.32
RDH11-211ENST00000557726 CCDC88AQ3V6T2 1871 aa17.06■□□□□ 0.32
RDH11-211ENST00000557726 NPHP1O15259 732 aa17.06■□□□□ 0.32
RDH11-211ENST00000557726 KCNQ3O43525 872 aa17.06■□□□□ 0.32
RDH11-211ENST00000557726 PPP2R1AP30153 589 aa17.06■□□□□ 0.32
RDH11-211ENST00000557726 CARMIL3Q8ND23 1372 aa17.05■□□□□ 0.32
RDH11-211ENST00000557726 SCN7AQ01118 1682 aa17.05■□□□□ 0.32
RDH11-211ENST00000557726 RBM46Q8TBY0 533 aaKnown RBP17.05■□□□□ 0.32
RDH11-211ENST00000557726 ZNF622Q969S3 477 aaKnown RBP eCLIP17.05■□□□□ 0.32
RDH11-211ENST00000557726 RRAGCQ9HB90 399 aa17.05■□□□□ 0.32
RDH11-211ENST00000557726 LMNB1P20700 586 aa17.04■□□□□ 0.32
RDH11-211ENST00000557726 PDE6BP35913 854 aa17.04■□□□□ 0.32
RDH11-211ENST00000557726 MCM10Q7L590 875 aa17.04■□□□□ 0.32
RDH11-211ENST00000557726 CCDC24Q8N4L8 307 aa17.04■□□□□ 0.32
RDH11-211ENST00000557726 SETDB2Q96T68 719 aa17.04■□□□□ 0.32
RDH11-211ENST00000557726 BRIP1Q9BX63 1249 aa17.03■□□□□ 0.32
RDH11-211ENST00000557726 ZNF219Q9P2Y4 722 aaPredicted RBP17.03■□□□□ 0.32
RDH11-211ENST00000557726 PDZRN3Q9UPQ7 1066 aa17.03■□□□□ 0.32
RDH11-211ENST00000557726 USP16Q9Y5T5 823 aa17.03■□□□□ 0.32
RDH11-211ENST00000557726 TNRC6CQ9HCJ0 1690 aaKnown RBP17.03■□□□□ 0.32
RDH11-211ENST00000557726 ANKRD31Q8N7Z5 1873 aa17.03■□□□□ 0.32
RDH11-211ENST00000557726 CAMTA2O94983 1202 aa17.02■□□□□ 0.32
RDH11-211ENST00000557726 PIP4K2AP48426 406 aaPredicted RBP17.02■□□□□ 0.32
RDH11-211ENST00000557726 PRR5LQ6MZQ0 368 aa17.02■□□□□ 0.32
RDH11-211ENST00000557726 DZIP3Q86Y13 1208 aaKnown RBP17.02■□□□□ 0.32
RDH11-211ENST00000557726 CNBD1Q8NA66 436 aa17.02■□□□□ 0.32
RDH11-211ENST00000557726 CEP350Q5VT06 3117 aa17.02■□□□□ 0.31
RDH11-211ENST00000557726 ZC3H4Q9UPT8 1303 aaKnown RBP17.01■□□□□ 0.31
RDH11-211ENST00000557726 NEFMP07197 916 aa17.01■□□□□ 0.31
RDH11-211ENST00000557726 SNRPA1P09661 255 aaKnown RBP17.01■□□□□ 0.31
RDH11-211ENST00000557726 ST5P78524 1137 aa17.01■□□□□ 0.31
RDH11-211ENST00000557726 DCTN1Q14203 1278 aa17.01■□□□□ 0.31
RDH11-211ENST00000557726 FSTL1Q12841 308 aa17■□□□□ 0.31
RDH11-211ENST00000557726 PRAMEF22A3QJZ6 481 aa16.99■□□□□ 0.31
RDH11-211ENST00000557726 C21orf2O43822 256 aa16.99■□□□□ 0.31
RDH11-211ENST00000557726 BCORQ6W2J9 1755 aa16.99■□□□□ 0.31
RDH11-211ENST00000557726 CACNA1SQ13698 1873 aa16.99■□□□□ 0.31
RDH11-211ENST00000557726 GLTPD2A6NH11 291 aa16.98■□□□□ 0.31
RDH11-211ENST00000557726 NFKBIEO00221 500 aa16.98■□□□□ 0.31
RDH11-211ENST00000557726 HTATSF1O43719 755 aaKnown RBP16.98■□□□□ 0.31
RDH11-211ENST00000557726 PRELPP51888 382 aa16.98■□□□□ 0.31
RDH11-211ENST00000557726 ZNF652Q9Y2D9 606 aa16.98■□□□□ 0.31
RDH11-211ENST00000557726 COL11A2P13942 1736 aaPredicted RBP16.98■□□□□ 0.31
RDH11-211ENST00000557726 TIAM2Q8IVF5 1701 aa16.98■□□□□ 0.31
RDH11-211ENST00000557726 WDR90Q96KV7 1748 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 139.4 ms