RNA–Protein interactions for RNA: ENST00000557529.1

SHMT2-233, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 1,369 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-233ENST00000557529 PAPPAQ13219 1627 aa15.66■□□□□ 0.1
SHMT2-233ENST00000557529 ATP10DQ9P241 1426 aa15.66■□□□□ 0.1
SHMT2-233ENST00000557529 C5P01031 1676 aa15.66■□□□□ 0.1
SHMT2-233ENST00000557529 PI4KAP2A4QPH2 592 aa15.65■□□□□ 0.1
SHMT2-233ENST00000557529 RGS3P49796 1198 aa15.65■□□□□ 0.1
SHMT2-233ENST00000557529 PDIA6Q15084 440 aa15.65■□□□□ 0.1
SHMT2-233ENST00000557529 DDB1Q16531 1140 aa15.65■□□□□ 0.1
SHMT2-233ENST00000557529 KSR2Q6VAB6 950 aa15.65■□□□□ 0.1
SHMT2-233ENST00000557529 ANKRD44Q8N8A2 993 aa15.65■□□□□ 0.1
SHMT2-233ENST00000557529 PI4KAP1Q8N8J0 262 aa15.65■□□□□ 0.1
SHMT2-233ENST00000557529 CCDC9Q9Y3X0 531 aaKnown RBP15.65■□□□□ 0.1
SHMT2-233ENST00000557529 UBR2Q8IWV8 1755 aa15.65■□□□□ 0.1
SHMT2-233ENST00000557529 ANXA1P04083 346 aa15.64■□□□□ 0.09
SHMT2-233ENST00000557529 GNAI2P04899 355 aa15.64■□□□□ 0.09
SHMT2-233ENST00000557529 VPS72Q15906 364 aa15.64■□□□□ 0.09
SHMT2-233ENST00000557529 PROSER3Q2NL68 480 aa15.64■□□□□ 0.09
SHMT2-233ENST00000557529 FNBP4Q8N3X1 1017 aaPredicted RBP15.64■□□□□ 0.09
SHMT2-233ENST00000557529 C8orf37Q96NL8 207 aa15.64■□□□□ 0.09
SHMT2-233ENST00000557529 ADCY9O60503 1353 aa15.64■□□□□ 0.09
SHMT2-233ENST00000557529 TOGARAM1Q9Y4F4 1720 aa15.64■□□□□ 0.09
SHMT2-233ENST00000557529 KCPQ6ZWJ8 1503 aa15.64■□□□□ 0.09
SHMT2-233ENST00000557529 CEP85Q6P2H3 762 aa15.63■□□□□ 0.09
SHMT2-233ENST00000557529 SKAP1Q86WV1 359 aa15.63■□□□□ 0.09
SHMT2-233ENST00000557529 SIRT2Q8IXJ6 389 aa15.63■□□□□ 0.09
SHMT2-233ENST00000557529 USP16Q9Y5T5 823 aa15.63■□□□□ 0.09
SHMT2-233ENST00000557529 LAMB4A4D0S4 1761 aa15.63■□□□□ 0.09
SHMT2-233ENST00000557529 GLI3P10071 1580 aa15.63■□□□□ 0.09
SHMT2-233ENST00000557529 HMMRO75330 724 aa15.62■□□□□ 0.09
SHMT2-233ENST00000557529 ALDH1L1O75891 902 aa15.62■□□□□ 0.09
SHMT2-233ENST00000557529 BEND3Q5T5X7 828 aa15.62■□□□□ 0.09
SHMT2-233ENST00000557529 PIGBQ92521 554 aa15.62■□□□□ 0.09
SHMT2-233ENST00000557529 TEX13AQ9BXU3 409 aaPredicted RBP15.62■□□□□ 0.09
SHMT2-233ENST00000557529 RBM19Q9Y4C8 960 aaKnown RBP15.62■□□□□ 0.09
SHMT2-233ENST00000557529 BCL9LQ86UU0 1499 aa15.62■□□□□ 0.09
SHMT2-233ENST00000557529 NUCB1Q02818 461 aa15.62■□□□□ 0.09
SHMT2-233ENST00000557529 VSIG10Q8N0Z9 540 aa15.62■□□□□ 0.09
SHMT2-233ENST00000557529 HDAC5Q9UQL6 1122 aa15.62■□□□□ 0.09
SHMT2-233ENST00000557529 MAP3K2Q9Y2U5 619 aa15.62■□□□□ 0.09
SHMT2-233ENST00000557529 BCL9O00512 1426 aa15.61■□□□□ 0.09
SHMT2-233ENST00000557529 UBTFL1P0CB47 393 aaPredicted RBP15.61■□□□□ 0.09
SHMT2-233ENST00000557529 MYL6BP14649 208 aa15.61■□□□□ 0.09
SHMT2-233ENST00000557529 PDE4AP27815 886 aa15.61■□□□□ 0.09
SHMT2-233ENST00000557529 HSPA1LP34931 641 aa15.61■□□□□ 0.09
SHMT2-233ENST00000557529 USP44Q9H0E7 712 aa15.61■□□□□ 0.09
SHMT2-233ENST00000557529 DCTPP1Q9H773 170 aa15.61■□□□□ 0.09
SHMT2-233ENST00000557529 IBTKQ9P2D0 1353 aaPredicted RBP15.61■□□□□ 0.09
SHMT2-233ENST00000557529 PTCD1O75127 700 aaKnown RBP15.6■□□□□ 0.09
SHMT2-233ENST00000557529 LRP10Q7Z4F1 713 aa15.6■□□□□ 0.09
SHMT2-233ENST00000557529 RIC3Q7Z5B4 369 aa15.6■□□□□ 0.09
SHMT2-233ENST00000557529 XAGE3Q8WTP9 111 aa15.6■□□□□ 0.09
SHMT2-233ENST00000557529 ATG3Q9NT62 314 aa15.6■□□□□ 0.09
SHMT2-233ENST00000557529 AIMP1Q12904 312 aaKnown RBP15.59■□□□□ 0.09
SHMT2-233ENST00000557529 MEX3CQ5U5Q3 659 aaKnown RBP15.59■□□□□ 0.09
SHMT2-233ENST00000557529 COPS6Q7L5N1 327 aa15.59■□□□□ 0.09
SHMT2-233ENST00000557529 CHD1LQ86WJ1 897 aa15.59■□□□□ 0.09
SHMT2-233ENST00000557529 LINS1Q8NG48 757 aa15.59■□□□□ 0.09
SHMT2-233ENST00000557529 BACH2Q9BYV9 841 aa15.59■□□□□ 0.09
SHMT2-233ENST00000557529 USP21Q9UK80 565 aa15.59■□□□□ 0.09
SHMT2-233ENST00000557529 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.58■□□□□ 0.08
SHMT2-233ENST00000557529 NEXNQ0ZGT2 675 aa15.58■□□□□ 0.08
SHMT2-233ENST00000557529 FAM161AQ3B820 660 aa15.58■□□□□ 0.08
SHMT2-233ENST00000557529 ASAP1Q9ULH1 1129 aa15.58■□□□□ 0.08
SHMT2-233ENST00000557529 ITGB4P16144 1822 aa15.57■□□□□ 0.08
SHMT2-233ENST00000557529 ATP8B2P98198 1209 aa15.57■□□□□ 0.08
SHMT2-233ENST00000557529 ANKRD45Q5TZF3 282 aa15.57■□□□□ 0.08
SHMT2-233ENST00000557529 ANKRD13DQ6ZTN6 518 aa15.57■□□□□ 0.08
SHMT2-233ENST00000557529 MARCH10Q8NA82 808 aaPredicted RBP15.57■□□□□ 0.08
SHMT2-233ENST00000557529 ZBTB47Q9UFB7 747 aaPredicted RBP15.57■□□□□ 0.08
SHMT2-233ENST00000557529 LRRFIP2Q9Y608 721 aaKnown RBP15.57■□□□□ 0.08
SHMT2-233ENST00000557529 PRIM1P49642 420 aaKnown RBP15.56■□□□□ 0.08
SHMT2-233ENST00000557529 FAM98CQ17RN3 349 aaKnown RBP15.56■□□□□ 0.08
SHMT2-233ENST00000557529 SYTL4Q96C24 671 aaPredicted RBP15.56■□□□□ 0.08
SHMT2-233ENST00000557529 METTL22Q9BUU2 404 aaPredicted RBP15.56■□□□□ 0.08
SHMT2-233ENST00000557529 NBPF26B4DH59 902 aa15.55■□□□□ 0.08
SHMT2-233ENST00000557529 STARD3NLO95772 234 aa15.55■□□□□ 0.08
SHMT2-233ENST00000557529 NBPF14Q5TI25 921 aa15.55■□□□□ 0.08
SHMT2-233ENST00000557529 NBPF10Q6P3W6 841 aaKnown RBP15.55■□□□□ 0.08
SHMT2-233ENST00000557529 NBPF15Q8N660 670 aa15.55■□□□□ 0.08
SHMT2-233ENST00000557529 PLBD2Q8NHP8 589 aa15.55■□□□□ 0.08
SHMT2-233ENST00000557529 C9orf78Q9NZ63 289 aaPredicted RBP15.55■□□□□ 0.08
SHMT2-233ENST00000557529 DOT1LQ8TEK3 1739 aa15.54■□□□□ 0.08
SHMT2-233ENST00000557529 RBM42Q9BTD8 480 aaKnown RBP15.54■□□□□ 0.08
SHMT2-233ENST00000557529 LNPKQ9C0E8 428 aa15.54■□□□□ 0.08
SHMT2-233ENST00000557529 UTYO14607 1347 aa15.53■□□□□ 0.08
SHMT2-233ENST00000557529 NBPF7P0C2Y1 421 aaPredicted RBP15.53■□□□□ 0.08
SHMT2-233ENST00000557529 DNAJC10Q8IXB1 793 aa15.53■□□□□ 0.08
SHMT2-233ENST00000557529 NEURL1BA8MQ27 555 aa15.52■□□□□ 0.08
SHMT2-233ENST00000557529 GRM8O00222 908 aa15.52■□□□□ 0.08
SHMT2-233ENST00000557529 A1BGP04217 495 aa15.52■□□□□ 0.08
SHMT2-233ENST00000557529 PIP4K2AP48426 406 aaPredicted RBP15.52■□□□□ 0.08
SHMT2-233ENST00000557529 CWF19L2Q2TBE0 894 aaKnown RBP15.52■□□□□ 0.08
SHMT2-233ENST00000557529 C8orf34Q49A92 452 aa15.52■□□□□ 0.08
SHMT2-233ENST00000557529 MYD88Q99836 296 aa15.52■□□□□ 0.08
SHMT2-233ENST00000557529 AFF2P51816 1311 aa15.52■□□□□ 0.07
SHMT2-233ENST00000557529 IGKV5-2P06315 115 aa15.51■□□□□ 0.07
SHMT2-233ENST00000557529 SSH3Q8TE77 659 aa15.51■□□□□ 0.07
SHMT2-233ENST00000557529 SMARCC1Q92922 1105 aaPredicted RBP15.51■□□□□ 0.07
SHMT2-233ENST00000557529 A0A0G2JS52 829 aa15.5■□□□□ 0.07
SHMT2-233ENST00000557529 MYT1Q01538 1121 aa15.5■□□□□ 0.07
SHMT2-233ENST00000557529 MTX1Q13505 466 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms