RNA–Protein interactions for RNA: ENST00000557511.5

PSEN1-223, Transcript of presenilin 1, humanhuman

TSL 5 BASIC

Gene PSEN1, Length 1,230 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-223ENST00000557511 SHANK3Q9BYB0 1731 aa11.03□□□□□ -0.64
PSEN1-223ENST00000557511 BTAF1O14981 1849 aa11.02□□□□□ -0.64
PSEN1-223ENST00000557511 RNMTO43148 476 aaKnown RBP11.02□□□□□ -0.65
PSEN1-223ENST00000557511 RSPH6AQ9H0K4 717 aa11.02□□□□□ -0.65
PSEN1-223ENST00000557511 TFCP2L1Q9NZI6 479 aa11.02□□□□□ -0.65
PSEN1-223ENST00000557511 MAP3K5Q99683 1374 aa11.02□□□□□ -0.65
PSEN1-223ENST00000557511 RREB1Q92766 1687 aa11.01□□□□□ -0.65
PSEN1-223ENST00000557511 PLCG2P16885 1265 aa11.01□□□□□ -0.65
PSEN1-223ENST00000557511 ATP6V1AP38606 617 aa11.01□□□□□ -0.65
PSEN1-223ENST00000557511 TTC5Q8N0Z6 440 aa11.01□□□□□ -0.65
PSEN1-223ENST00000557511 NFATC2IPQ8NCF5 419 aa11.01□□□□□ -0.65
PSEN1-223ENST00000557511 AK7Q96M32 723 aa11.01□□□□□ -0.65
PSEN1-223ENST00000557511 SLC52A2Q9HAB3 445 aa11.01□□□□□ -0.65
PSEN1-223ENST00000557511 LOC102724428A0A0B4J2F2 783 aa11□□□□□ -0.65
PSEN1-223ENST00000557511 SIK1P57059 783 aa11□□□□□ -0.65
PSEN1-223ENST00000557511 FLAD1Q8NFF5 587 aa11□□□□□ -0.65
PSEN1-223ENST00000557511 ANO8Q9HCE9 1232 aaPredicted RBP11□□□□□ -0.65
PSEN1-223ENST00000557511 LRRC4BQ9NT99 713 aa11□□□□□ -0.65
PSEN1-223ENST00000557511 PPP1R1BQ9UD71 204 aaPredicted RBP11□□□□□ -0.65
PSEN1-223ENST00000557511 ASAP1Q9ULH1 1129 aa11□□□□□ -0.65
PSEN1-223ENST00000557511 NUP188Q5SRE5 1749 aa10.99□□□□□ -0.65
PSEN1-223ENST00000557511 HTATSF1O43719 755 aaKnown RBP10.99□□□□□ -0.65
PSEN1-223ENST00000557511 KCNQ4P56696 695 aa10.99□□□□□ -0.65
PSEN1-223ENST00000557511 LGR6Q9HBX8 967 aa10.99□□□□□ -0.65
PSEN1-223ENST00000557511 SPON1Q9HCB6 807 aa10.99□□□□□ -0.65
PSEN1-223ENST00000557511 ATG3Q9NT62 314 aa10.99□□□□□ -0.65
PSEN1-223ENST00000557511 KDM6AO15550 1401 aaPredicted RBP10.99□□□□□ -0.65
PSEN1-223ENST00000557511 PTCD1O75127 700 aaKnown RBP10.98□□□□□ -0.65
PSEN1-223ENST00000557511 LHX8Q68G74 356 aa10.98□□□□□ -0.65
PSEN1-223ENST00000557511 EFCAB3Q8N7B9 438 aa10.98□□□□□ -0.65
PSEN1-223ENST00000557511 PHACTR3Q96KR7 559 aa10.98□□□□□ -0.65
PSEN1-223ENST00000557511 OCEL1Q9H607 264 aa10.98□□□□□ -0.65
PSEN1-223ENST00000557511 LMOD3Q0VAK6 560 aa10.97□□□□□ -0.65
PSEN1-223ENST00000557511 SLC16A10Q8TF71 515 aa10.97□□□□□ -0.65
PSEN1-223ENST00000557511 NFE2L2Q16236 605 aa10.96□□□□□ -0.65
PSEN1-223ENST00000557511 ZNF827Q17R98 1081 aa10.96□□□□□ -0.65
PSEN1-223ENST00000557511 NPM2Q86SE8 214 aaKnown RBP10.96□□□□□ -0.65
PSEN1-223ENST00000557511 MTFR1LQ9H019 292 aa10.96□□□□□ -0.65
PSEN1-223ENST00000557511 COLQQ9Y215 455 aaPredicted RBP10.96□□□□□ -0.65
PSEN1-223ENST00000557511 TOGARAM1Q9Y4F4 1720 aa10.95□□□□□ -0.66
PSEN1-223ENST00000557511 BTBD11A6QL63 1104 aa10.95□□□□□ -0.66
PSEN1-223ENST00000557511 GNPATO15228 680 aa10.95□□□□□ -0.66
PSEN1-223ENST00000557511 ZBTB7AO95365 584 aa10.95□□□□□ -0.66
PSEN1-223ENST00000557511 POLD1P28340 1107 aa10.95□□□□□ -0.66
PSEN1-223ENST00000557511 IL17REQ8NFR9 667 aa10.95□□□□□ -0.66
PSEN1-223ENST00000557511 PNISRQ8TF01 805 aaKnown RBP10.95□□□□□ -0.66
PSEN1-223ENST00000557511 RUNDC1Q96C34 613 aa10.95□□□□□ -0.66
PSEN1-223ENST00000557511 ITGB4P16144 1822 aa10.95□□□□□ -0.66
PSEN1-223ENST00000557511 PHF14O94880 888 aa10.94□□□□□ -0.66
PSEN1-223ENST00000557511 IRX5P78411 483 aaPredicted RBP10.94□□□□□ -0.66
PSEN1-223ENST00000557511 SLC39A6Q13433 755 aa10.94□□□□□ -0.66
PSEN1-223ENST00000557511 MCM10Q7L590 875 aa10.94□□□□□ -0.66
PSEN1-223ENST00000557511 PLEKHF1Q96S99 279 aa10.94□□□□□ -0.66
PSEN1-223ENST00000557511 TEX13AQ9BXU3 409 aaPredicted RBP10.94□□□□□ -0.66
PSEN1-223ENST00000557511 MRS2Q9HD23 443 aa10.94□□□□□ -0.66
PSEN1-223ENST00000557511 RTCBQ9Y3I0 505 aaKnown RBP10.94□□□□□ -0.66
PSEN1-223ENST00000557511 LY75O60449 1722 aa10.94□□□□□ -0.66
PSEN1-223ENST00000557511 STARD3NLO95772 234 aa10.93□□□□□ -0.66
PSEN1-223ENST00000557511 SSFA2P28290 1259 aa10.93□□□□□ -0.66
PSEN1-223ENST00000557511 RIPK4P57078 832 aa10.93□□□□□ -0.66
PSEN1-223ENST00000557511 RC3H1Q5TC82 1133 aaKnown RBP10.93□□□□□ -0.66
PSEN1-223ENST00000557511 ZNF790Q6PG37 636 aa10.93□□□□□ -0.66
PSEN1-223ENST00000557511 VSIG10Q8N0Z9 540 aa10.93□□□□□ -0.66
PSEN1-223ENST00000557511 LINC00116Q8NCU8 138 aa10.93□□□□□ -0.66
PSEN1-223ENST00000557511 FMNL2Q96PY5 1086 aa10.93□□□□□ -0.66
PSEN1-223ENST00000557511 ADAMTS8Q9UP79 889 aa10.93□□□□□ -0.66
PSEN1-223ENST00000557511 PNPLA7Q6ZV29 1317 aa10.92□□□□□ -0.66
PSEN1-223ENST00000557511 ITPK1Q13572 414 aa10.92□□□□□ -0.66
PSEN1-223ENST00000557511 DCTN1Q14203 1278 aa10.92□□□□□ -0.66
PSEN1-223ENST00000557511 TAF7Q15545 349 aaPredicted RBP10.92□□□□□ -0.66
PSEN1-223ENST00000557511 NEUROD2Q15784 382 aa10.92□□□□□ -0.66
PSEN1-223ENST00000557511 TRAPPC3LQ5T215 181 aa10.92□□□□□ -0.66
PSEN1-223ENST00000557511 CCDC146Q8IYE0 955 aa10.92□□□□□ -0.66
PSEN1-223ENST00000557511 MRC1P22897 1456 aa10.92□□□□□ -0.66
PSEN1-223ENST00000557511 CEMIPQ8WUJ3 1361 aa10.91□□□□□ -0.66
PSEN1-223ENST00000557511 CNTNAP4Q9C0A0 1308 aa10.91□□□□□ -0.66
PSEN1-223ENST00000557511 SCN11AQ9UI33 1791 aa10.91□□□□□ -0.66
PSEN1-223ENST00000557511 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.91□□□□□ -0.66
PSEN1-223ENST00000557511 POTEFA5A3E0 1075 aa10.91□□□□□ -0.66
PSEN1-223ENST00000557511 RFC4P35249 363 aa10.91□□□□□ -0.66
PSEN1-223ENST00000557511 COL23A1Q86Y22 540 aaPredicted RBP10.91□□□□□ -0.66
PSEN1-223ENST00000557511 HS6ST3Q8IZP7 471 aa10.91□□□□□ -0.66
PSEN1-223ENST00000557511 PAPPAQ13219 1627 aa10.91□□□□□ -0.66
PSEN1-223ENST00000557511 C5P01031 1676 aa10.9□□□□□ -0.66
PSEN1-223ENST00000557511 RPS6KA4O75676 772 aa10.9□□□□□ -0.66
PSEN1-223ENST00000557511 TMPOP42166 694 aaKnown RBP10.9□□□□□ -0.66
PSEN1-223ENST00000557511 CRKLP46109 303 aaKnown RBP10.9□□□□□ -0.66
PSEN1-223ENST00000557511 DNAJC10Q8IXB1 793 aa10.9□□□□□ -0.66
PSEN1-223ENST00000557511 CALD1Q05682 793 aaKnown RBP10.89□□□□□ -0.67
PSEN1-223ENST00000557511 SLC4A9Q96Q91 983 aa10.89□□□□□ -0.67
PSEN1-223ENST00000557511 ARXQ96QS3 562 aa10.89□□□□□ -0.67
PSEN1-223ENST00000557511 PDGFDQ9GZP0 370 aaPredicted RBP10.89□□□□□ -0.67
PSEN1-223ENST00000557511 CCDC87Q9NVE4 849 aa10.89□□□□□ -0.67
PSEN1-223ENST00000557511 RRP7AQ9Y3A4 280 aaKnown RBP10.89□□□□□ -0.67
PSEN1-223ENST00000557511 C4BP0C0L5 1744 aa10.89□□□□□ -0.67
PSEN1-223ENST00000557511 HEG1Q9ULI3 1381 aa10.89□□□□□ -0.67
PSEN1-223ENST00000557511 LRP5O75197 1615 aa10.88□□□□□ -0.67
PSEN1-223ENST00000557511 A0A087WZG4 1122 aa10.88□□□□□ -0.67
PSEN1-223ENST00000557511 G3V3G9 751 aa10.88□□□□□ -0.67
PSEN1-223ENST00000557511 ZPR1O75312 459 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms