RNA–Protein interactions for RNA: ENST00000557331.1

RDH11-210, Transcript of retinol dehydrogenase 11, humanhuman

TSL 4

Gene RDH11, Length 553 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-210ENST00000557331 H0YIN7 160 aa13.9□□□□□ -0.18
RDH11-210ENST00000557331 STARD3NLO95772 234 aa13.9□□□□□ -0.18
RDH11-210ENST00000557331 CHRNA5P30532 468 aa13.9□□□□□ -0.18
RDH11-210ENST00000557331 USPL1Q5W0Q7 1092 aa13.9□□□□□ -0.18
RDH11-210ENST00000557331 TNRC6CQ9HCJ0 1690 aaKnown RBP13.9□□□□□ -0.18
RDH11-210ENST00000557331 KCPQ6ZWJ8 1503 aa13.9□□□□□ -0.19
RDH11-210ENST00000557331 CYP19A1P11511 503 aaPredicted RBP13.89□□□□□ -0.19
RDH11-210ENST00000557331 IL13P35225 146 aa13.89□□□□□ -0.19
RDH11-210ENST00000557331 TEX13AQ9BXU3 409 aaPredicted RBP13.89□□□□□ -0.19
RDH11-210ENST00000557331 SBF1O95248 1867 aa13.89□□□□□ -0.19
RDH11-210ENST00000557331 AEBP1Q8IUX7 1158 aa13.88□□□□□ -0.19
RDH11-210ENST00000557331 DNAJC10Q8IXB1 793 aa13.88□□□□□ -0.19
RDH11-210ENST00000557331 SERPINB2P05120 415 aa13.87□□□□□ -0.19
RDH11-210ENST00000557331 NFIXQ14938 502 aa13.87□□□□□ -0.19
RDH11-210ENST00000557331 TNS4Q8IZW8 715 aa13.87□□□□□ -0.19
RDH11-210ENST00000557331 COL15A1P39059 1388 aa13.86□□□□□ -0.19
RDH11-210ENST00000557331 RNMTO43148 476 aaKnown RBP13.86□□□□□ -0.19
RDH11-210ENST00000557331 PDE6BP35913 854 aa13.86□□□□□ -0.19
RDH11-210ENST00000557331 PRELPP51888 382 aa13.86□□□□□ -0.19
RDH11-210ENST00000557331 COL13A1Q5TAT6 717 aaPredicted RBP13.86□□□□□ -0.19
RDH11-210ENST00000557331 SOGA3Q5TF21 947 aa13.86□□□□□ -0.19
RDH11-210ENST00000557331 NPM2Q86SE8 214 aaKnown RBP13.86□□□□□ -0.19
RDH11-210ENST00000557331 C2CD5Q86YS7 1000 aa13.85□□□□□ -0.19
RDH11-210ENST00000557331 TTC5Q8N0Z6 440 aa13.85□□□□□ -0.19
RDH11-210ENST00000557331 BRIP1Q9BX63 1249 aa13.85□□□□□ -0.19
RDH11-210ENST00000557331 SCN11AQ9UI33 1791 aa13.85□□□□□ -0.19
RDH11-210ENST00000557331 TJP1Q07157 1748 aa13.84□□□□□ -0.19
RDH11-210ENST00000557331 EIF5P55010 431 aaKnown RBP13.83□□□□□ -0.2
RDH11-210ENST00000557331 HTRA3P83110 453 aa13.83□□□□□ -0.2
RDH11-210ENST00000557331 LGR6Q9HBX8 967 aa13.83□□□□□ -0.2
RDH11-210ENST00000557331 MRC1P22897 1456 aa13.82□□□□□ -0.2
RDH11-210ENST00000557331 HSPA5P11021 654 aaKnown RBP13.82□□□□□ -0.2
RDH11-210ENST00000557331 CNKSR1Q969H4 720 aa13.82□□□□□ -0.2
RDH11-210ENST00000557331 ZBTB1Q9Y2K1 713 aa13.82□□□□□ -0.2
RDH11-210ENST00000557331 LTBP3Q9NS15 1303 aa13.82□□□□□ -0.2
RDH11-210ENST00000557331 NRXN2Q9P2S2 1712 aa13.81□□□□□ -0.2
RDH11-210ENST00000557331 DIAPH1O60610 1272 aaKnown RBP13.81□□□□□ -0.2
RDH11-210ENST00000557331 IL6STP40189 918 aaPredicted RBP13.81□□□□□ -0.2
RDH11-210ENST00000557331 RASSF7Q02833 373 aa13.81□□□□□ -0.2
RDH11-210ENST00000557331 SLC39A6Q13433 755 aa13.81□□□□□ -0.2
RDH11-210ENST00000557331 ERFEQ4G0M1 354 aa13.81□□□□□ -0.2
RDH11-210ENST00000557331 BCL2L12Q9HB09 334 aa13.81□□□□□ -0.2
RDH11-210ENST00000557331 CREBZFQ9NS37 354 aa13.81□□□□□ -0.2
RDH11-210ENST00000557331 ADAMTS7Q9UKP4 1686 aa13.81□□□□□ -0.2
RDH11-210ENST00000557331 IQCA1LA6NCM1 817 aa13.8□□□□□ -0.2
RDH11-210ENST00000557331 CANXP27824 592 aaKnown RBP13.8□□□□□ -0.2
RDH11-210ENST00000557331 TEFQ10587 303 aa13.8□□□□□ -0.2
RDH11-210ENST00000557331 ZNF622Q969S3 477 aaKnown RBP eCLIP13.8□□□□□ -0.2
RDH11-210ENST00000557331 SETDB2Q96T68 719 aa13.8□□□□□ -0.2
RDH11-210ENST00000557331 CARMIL3Q8ND23 1372 aa13.8□□□□□ -0.2
RDH11-210ENST00000557331 AFDNP55196 1824 aaKnown RBP13.79□□□□□ -0.2
RDH11-210ENST00000557331 NFKBIEO00221 500 aa13.79□□□□□ -0.2
RDH11-210ENST00000557331 NPHP1O15259 732 aa13.79□□□□□ -0.2
RDH11-210ENST00000557331 HSPA1AP0DMV8 641 aaKnown RBP13.79□□□□□ -0.2
RDH11-210ENST00000557331 HSPA1BP0DMV9 641 aaKnown RBP13.79□□□□□ -0.2
RDH11-210ENST00000557331 MTHFSDQ2M296 383 aaKnown RBP13.79□□□□□ -0.2
RDH11-210ENST00000557331 AMER1Q5JTC6 1135 aaPredicted RBP13.79□□□□□ -0.2
RDH11-210ENST00000557331 CHADLQ6NUI6 762 aa13.79□□□□□ -0.2
RDH11-210ENST00000557331 GAS2L2Q8NHY3 880 aa13.79□□□□□ -0.2
RDH11-210ENST00000557331 TAOK3Q9H2K8 898 aa13.79□□□□□ -0.2
RDH11-210ENST00000557331 DLEC1Q9Y238 1755 aa13.78□□□□□ -0.2
RDH11-210ENST00000557331 RGL2O15211 777 aa13.78□□□□□ -0.2
RDH11-210ENST00000557331 ST5P78524 1137 aa13.78□□□□□ -0.2
RDH11-210ENST00000557331 STYK1Q6J9G0 422 aa13.78□□□□□ -0.2
RDH11-210ENST00000557331 ZNF790Q6PG37 636 aa13.78□□□□□ -0.2
RDH11-210ENST00000557331 GNAT3A8MTJ3 354 aa13.77□□□□□ -0.21
RDH11-210ENST00000557331 HMOX1P09601 288 aa13.77□□□□□ -0.21
RDH11-210ENST00000557331 CLEC4GQ6UXB4 293 aa13.77□□□□□ -0.21
RDH11-210ENST00000557331 BICDL1Q6ZP65 573 aa13.77□□□□□ -0.21
RDH11-210ENST00000557331 CNBD1Q8NA66 436 aa13.77□□□□□ -0.21
RDH11-210ENST00000557331 FMNL2Q96PY5 1086 aa13.77□□□□□ -0.21
RDH11-210ENST00000557331 HEG1Q9ULI3 1381 aa13.76□□□□□ -0.21
RDH11-210ENST00000557331 POTECB2RU33 542 aa13.76□□□□□ -0.21
RDH11-210ENST00000557331 C21orf2O43822 256 aa13.76□□□□□ -0.21
RDH11-210ENST00000557331 PRR5LQ6MZQ0 368 aa13.76□□□□□ -0.21
RDH11-210ENST00000557331 MASTLQ96GX5 879 aa13.76□□□□□ -0.21
RDH11-210ENST00000557331 DICER1Q9UPY3 1922 aaKnown RBP13.75□□□□□ -0.21
RDH11-210ENST00000557331 CAPN15O75808 1086 aa13.75□□□□□ -0.21
RDH11-210ENST00000557331 TBC1D9BQ66K14 1250 aa13.75□□□□□ -0.21
RDH11-210ENST00000557331 LDHDQ86WU2 507 aa13.75□□□□□ -0.21
RDH11-210ENST00000557331 ZNF496Q96IT1 587 aaPredicted RBP13.75□□□□□ -0.21
RDH11-210ENST00000557331 ZNF652Q9Y2D9 606 aa13.75□□□□□ -0.21
RDH11-210ENST00000557331 CCDC88AQ3V6T2 1871 aa13.75□□□□□ -0.21
RDH11-210ENST00000557331 SRGNP10124 158 aa13.74□□□□□ -0.21
RDH11-210ENST00000557331 L3MBTL3Q96JM7 780 aaPredicted RBP13.74□□□□□ -0.21
RDH11-210ENST00000557331 PRDM10Q9NQV6 1147 aa13.74□□□□□ -0.21
RDH11-210ENST00000557331 RTKN2Q8IZC4 609 aa13.73□□□□□ -0.21
RDH11-210ENST00000557331 AIDAQ96BJ3 306 aa13.73□□□□□ -0.21
RDH11-210ENST00000557331 TBC1D2BQ9UPU7 963 aa13.73□□□□□ -0.21
RDH11-210ENST00000557331 NPC1L1Q9UHC9 1359 aa13.72□□□□□ -0.21
RDH11-210ENST00000557331 FER1L6Q2WGJ9 1857 aa13.72□□□□□ -0.21
RDH11-210ENST00000557331 CCDC93Q567U6 631 aa13.72□□□□□ -0.21
RDH11-210ENST00000557331 PRPF40BQ6NWY9 871 aaKnown RBP13.72□□□□□ -0.21
RDH11-210ENST00000557331 TPTE2Q6XPS3 522 aa13.72□□□□□ -0.21
RDH11-210ENST00000557331 PNMA8AQ86V59 439 aaPredicted RBP13.72□□□□□ -0.21
RDH11-210ENST00000557331 IL17REQ8NFR9 667 aa13.72□□□□□ -0.21
RDH11-210ENST00000557331 PCGF6Q9BYE7 350 aa13.72□□□□□ -0.21
RDH11-210ENST00000557331 ZNF330Q9Y3S2 320 aaPredicted RBP13.72□□□□□ -0.21
RDH11-210ENST00000557331 UBR2Q8IWV8 1755 aa13.72□□□□□ -0.21
RDH11-210ENST00000557331 TIAM2Q8IVF5 1701 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms