RNA–Protein interactions for RNA: ENST00000556898.5

ATXN3-244, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 990 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-244ENST00000556898 SRCAPQ6ZRS2 3230 aa7.42□□□□□ -1.22
ATXN3-244ENST00000556898 TREML4Q6UXN2 200 aa7.42□□□□□ -1.22
ATXN3-244ENST00000556898 CRIPAKQ8N1N5 446 aa7.42□□□□□ -1.22
ATXN3-244ENST00000556898 GJD4Q96KN9 370 aaPredicted RBP7.42□□□□□ -1.22
ATXN3-244ENST00000556898 TESK2Q96S53 571 aa7.42□□□□□ -1.22
ATXN3-244ENST00000556898 ORAI2Q96SN7 254 aa7.42□□□□□ -1.22
ATXN3-244ENST00000556898 POLR3GLQ9BT43 218 aa7.42□□□□□ -1.22
ATXN3-244ENST00000556898 GMPR2Q9P2T1 348 aaKnown RBP7.42□□□□□ -1.22
ATXN3-244ENST00000556898 SALL2Q9Y467 1007 aaPredicted RBP7.42□□□□□ -1.22
ATXN3-244ENST00000556898 CHD2O14647 1828 aaKnown RBP7.42□□□□□ -1.22
ATXN3-244ENST00000556898 LRPPRCP42704 1394 aaKnown RBP7.42□□□□□ -1.22
ATXN3-244ENST00000556898 SIPA1L2Q9P2F8 1722 aaPredicted RBP7.41□□□□□ -1.22
ATXN3-244ENST00000556898 MAP2K5Q13163 448 aa7.41□□□□□ -1.22
ATXN3-244ENST00000556898 SF3B2Q13435 895 aaKnown RBP7.41□□□□□ -1.22
ATXN3-244ENST00000556898 CYP4X1Q8N118 509 aa7.41□□□□□ -1.22
ATXN3-244ENST00000556898 PRAM1Q96QH2 718 aa7.41□□□□□ -1.22
ATXN3-244ENST00000556898 ROBO2Q9HCK4 1378 aa7.41□□□□□ -1.22
ATXN3-244ENST00000556898 ATRNO75882 1429 aa7.41□□□□□ -1.22
ATXN3-244ENST00000556898 PTCH1Q13635 1447 aa7.41□□□□□ -1.22
ATXN3-244ENST00000556898 WASHC2AQ641Q2 1341 aa7.4□□□□□ -1.22
ATXN3-244ENST00000556898 MINK1Q8N4C8 1332 aaPredicted RBP7.4□□□□□ -1.22
ATXN3-244ENST00000556898 CENPJQ9HC77 1338 aaPredicted RBP7.4□□□□□ -1.22
ATXN3-244ENST00000556898 ARHGEF28Q8N1W1 1705 aaKnown RBP7.4□□□□□ -1.23
ATXN3-244ENST00000556898 C1orf167Q5SNV9 1468 aa7.39□□□□□ -1.23
ATXN3-244ENST00000556898 ADGRL3Q9HAR2 1447 aa7.39□□□□□ -1.23
ATXN3-244ENST00000556898 ABCC11Q96J66 1382 aa7.39□□□□□ -1.23
ATXN3-244ENST00000556898 KIF7Q2M1P5 1343 aa7.39□□□□□ -1.23
ATXN3-244ENST00000556898 MSS51Q4VC12 460 aa7.39□□□□□ -1.23
ATXN3-244ENST00000556898 UNC5CLQ8IV45 518 aa7.39□□□□□ -1.23
ATXN3-244ENST00000556898 SULF1Q8IWU6 871 aa7.39□□□□□ -1.23
ATXN3-244ENST00000556898 POGKQ9P215 609 aa7.39□□□□□ -1.23
ATXN3-244ENST00000556898 DLC1Q96QB1 1528 aa7.38□□□□□ -1.23
ATXN3-244ENST00000556898 CCDC7Q96M83 1385 aa7.38□□□□□ -1.23
ATXN3-244ENST00000556898 NPHP3Q7Z494 1330 aa7.38□□□□□ -1.23
ATXN3-244ENST00000556898 AXIN1O15169 862 aa7.38□□□□□ -1.23
ATXN3-244ENST00000556898 ESCO1Q5FWF5 840 aa7.38□□□□□ -1.23
ATXN3-244ENST00000556898 DEFB132Q7Z7B7 95 aa7.38□□□□□ -1.23
ATXN3-244ENST00000556898 XRN1Q8IZH2 1706 aaKnown RBP7.38□□□□□ -1.23
ATXN3-244ENST00000556898 QRICH2Q9H0J4 1663 aa7.38□□□□□ -1.23
ATXN3-244ENST00000556898 TULP4Q9NRJ4 1543 aa7.37□□□□□ -1.23
ATXN3-244ENST00000556898 BCL9LQ86UU0 1499 aa7.37□□□□□ -1.23
ATXN3-244ENST00000556898 TECPR2O15040 1411 aa7.37□□□□□ -1.23
ATXN3-244ENST00000556898 BLMP54132 1417 aaPredicted RBP7.37□□□□□ -1.23
ATXN3-244ENST00000556898 EIF3AQ14152 1382 aaKnown RBP7.37□□□□□ -1.23
ATXN3-244ENST00000556898 SMPD1P17405 629 aa7.37□□□□□ -1.23
ATXN3-244ENST00000556898 SMCPP49901 116 aaPredicted RBP7.37□□□□□ -1.23
ATXN3-244ENST00000556898 DDX10Q13206 875 aaKnown RBP7.37□□□□□ -1.23
ATXN3-244ENST00000556898 HLA-CQ95604 372 aa7.37□□□□□ -1.23
ATXN3-244ENST00000556898 KNDC1Q76NI1 1749 aa7.37□□□□□ -1.23
ATXN3-244ENST00000556898 IRF6O14896 467 aa7.36□□□□□ -1.23
ATXN3-244ENST00000556898 FOXO3O43524 673 aa7.36□□□□□ -1.23
ATXN3-244ENST00000556898 CD46P15529 392 aa7.36□□□□□ -1.23
ATXN3-244ENST00000556898 MMP16P51512 607 aa7.36□□□□□ -1.23
ATXN3-244ENST00000556898 TMF1P82094 1093 aa7.36□□□□□ -1.23
ATXN3-244ENST00000556898 SEPT12Q8IYM1 358 aa7.36□□□□□ -1.23
ATXN3-244ENST00000556898 TTC24A2A3L6 582 aaPredicted RBP7.35□□□□□ -1.23
ATXN3-244ENST00000556898 J3QL48 77 aa7.35□□□□□ -1.23
ATXN3-244ENST00000556898 WNT7AO00755 349 aa7.35□□□□□ -1.23
ATXN3-244ENST00000556898 PRKCSHP14314 528 aaPredicted RBP7.35□□□□□ -1.23
ATXN3-244ENST00000556898 CCDC102AQ96A19 550 aa7.35□□□□□ -1.23
ATXN3-244ENST00000556898 SIRT1Q96EB6 747 aa7.35□□□□□ -1.23
ATXN3-244ENST00000556898 CDK19Q9BWU1 502 aa7.35□□□□□ -1.23
ATXN3-244ENST00000556898 ZBTB24O43167 697 aaPredicted RBP7.34□□□□□ -1.23
ATXN3-244ENST00000556898 BAG6P46379 1132 aa7.34□□□□□ -1.23
ATXN3-244ENST00000556898 XPCQ01831 940 aaPredicted RBP7.34□□□□□ -1.23
ATXN3-244ENST00000556898 TRIM32Q13049 653 aa7.34□□□□□ -1.23
ATXN3-244ENST00000556898 VPS72Q15906 364 aa7.34□□□□□ -1.23
ATXN3-244ENST00000556898 CTC1Q2NKJ3 1217 aa7.34□□□□□ -1.23
ATXN3-244ENST00000556898 LCE2CQ5TA81 110 aa7.34□□□□□ -1.23
ATXN3-244ENST00000556898 KRT27Q7Z3Y8 459 aa7.34□□□□□ -1.23
ATXN3-244ENST00000556898 MRGPRX2Q96LB1 330 aa7.34□□□□□ -1.23
ATXN3-244ENST00000556898 SLC24A3Q9HC58 644 aa7.34□□□□□ -1.23
ATXN3-244ENST00000556898 NHSL1Q5SYE7 1610 aa7.34□□□□□ -1.24
ATXN3-244ENST00000556898 SBNO2Q9Y2G9 1366 aa7.33□□□□□ -1.24
ATXN3-244ENST00000556898 PRR36Q9H6K5 1346 aa7.33□□□□□ -1.24
ATXN3-244ENST00000556898 WASLO00401 505 aaPredicted RBP7.33□□□□□ -1.24
ATXN3-244ENST00000556898 SRPK2P78362 688 aaKnown RBP7.33□□□□□ -1.24
ATXN3-244ENST00000556898 SNIP1Q8TAD8 396 aaKnown RBP7.33□□□□□ -1.24
ATXN3-244ENST00000556898 EVC2Q86UK5 1308 aa7.32□□□□□ -1.24
ATXN3-244ENST00000556898 KDM4AO75164 1064 aa7.32□□□□□ -1.24
ATXN3-244ENST00000556898 WFS1O76024 890 aa7.32□□□□□ -1.24
ATXN3-244ENST00000556898 DXOO77932 396 aaKnown RBP7.32□□□□□ -1.24
ATXN3-244ENST00000556898 SNRPBP14678 240 aaKnown RBP7.32□□□□□ -1.24
ATXN3-244ENST00000556898 SKOR1P84550 965 aa7.32□□□□□ -1.24
ATXN3-244ENST00000556898 NFX1Q12986 1120 aaKnown RBP7.32□□□□□ -1.24
ATXN3-244ENST00000556898 CNGB1Q14028 1251 aaPredicted RBP7.32□□□□□ -1.24
ATXN3-244ENST00000556898 GRIPAP1Q4V328 841 aa7.32□□□□□ -1.24
ATXN3-244ENST00000556898 TMC1Q8TDI8 760 aa7.32□□□□□ -1.24
ATXN3-244ENST00000556898 AK7Q96M32 723 aa7.32□□□□□ -1.24
ATXN3-244ENST00000556898 USB1Q9BQ65 265 aaKnown RBP7.32□□□□□ -1.24
ATXN3-244ENST00000556898 SLC12A5Q9H2X9 1139 aa7.32□□□□□ -1.24
ATXN3-244ENST00000556898 CCDC9Q9Y3X0 531 aaKnown RBP7.32□□□□□ -1.24
ATXN3-244ENST00000556898 NALCNQ8IZF0 1738 aa7.32□□□□□ -1.24
ATXN3-244ENST00000556898 SPATA31A3Q5VYP0 1347 aa7.31□□□□□ -1.24
ATXN3-244ENST00000556898 MDM2Q00987 491 aaPredicted RBP7.31□□□□□ -1.24
ATXN3-244ENST00000556898 GUCA2AQ02747 115 aa7.31□□□□□ -1.24
ATXN3-244ENST00000556898 PSME1Q06323 249 aa7.31□□□□□ -1.24
ATXN3-244ENST00000556898 Q3C1V9 767 aa7.31□□□□□ -1.24
ATXN3-244ENST00000556898 DIEXFQ68CQ4 756 aaKnown RBP7.31□□□□□ -1.24
ATXN3-244ENST00000556898 KRT28Q7Z3Y7 464 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms