RNA–Protein interactions for RNA: ENST00000556833.1

CHD8-211, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 5

Gene CHD8, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-211ENST00000556833 DALRD3Q5D0E6 543 aaKnown RBP20.02■□□□□ 0.8
CHD8-211ENST00000556833 COL15A1P39059 1388 aa20.02■□□□□ 0.8
CHD8-211ENST00000556833 UBR2Q8IWV8 1755 aa20.02■□□□□ 0.8
CHD8-211ENST00000556833 SBF1O95248 1867 aa20.01■□□□□ 0.79
CHD8-211ENST00000556833 U2SURPO15042 1029 aaKnown RBP20.01■□□□□ 0.79
CHD8-211ENST00000556833 CANXP27824 592 aaKnown RBP20■□□□□ 0.79
CHD8-211ENST00000556833 RNF181Q9P0P0 153 aa20■□□□□ 0.79
CHD8-211ENST00000556833 TM4SF1P30408 202 aa19.99■□□□□ 0.79
CHD8-211ENST00000556833 RASSF7Q02833 373 aa19.99■□□□□ 0.79
CHD8-211ENST00000556833 NFIXQ14938 502 aa19.99■□□□□ 0.79
CHD8-211ENST00000556833 BICDL1Q6ZP65 573 aa19.99■□□□□ 0.79
CHD8-211ENST00000556833 ZNF330Q9Y3S2 320 aaPredicted RBP19.99■□□□□ 0.79
CHD8-211ENST00000556833 COL3A1P02461 1466 aaPredicted RBP19.98■□□□□ 0.79
CHD8-211ENST00000556833 CCDC88AQ3V6T2 1871 aa19.97■□□□□ 0.79
CHD8-211ENST00000556833 PER1O15534 1290 aaPredicted RBP19.97■□□□□ 0.79
CHD8-211ENST00000556833 DLEC1Q9Y238 1755 aa19.97■□□□□ 0.79
CHD8-211ENST00000556833 CARMIL3Q8ND23 1372 aa19.96■□□□□ 0.79
CHD8-211ENST00000556833 NRXN2Q9P2S2 1712 aa19.96■□□□□ 0.79
CHD8-211ENST00000556833 SIPA1L3O60292 1781 aaPredicted RBP19.96■□□□□ 0.79
CHD8-211ENST00000556833 TTC5Q8N0Z6 440 aa19.96■□□□□ 0.79
CHD8-211ENST00000556833 BCL2L12Q9HB09 334 aa19.96■□□□□ 0.79
CHD8-211ENST00000556833 NARFQ9UHQ1 456 aa19.96■□□□□ 0.79
CHD8-211ENST00000556833 TOMM70O94826 608 aa19.95■□□□□ 0.78
CHD8-211ENST00000556833 HTRA3P83110 453 aa19.95■□□□□ 0.78
CHD8-211ENST00000556833 WDR90Q96KV7 1748 aa19.94■□□□□ 0.78
CHD8-211ENST00000556833 SERPINB2P05120 415 aa19.94■□□□□ 0.78
CHD8-211ENST00000556833 C16orf71Q8IYS4 520 aaPredicted RBP19.94■□□□□ 0.78
CHD8-211ENST00000556833 CCDC24Q8N4L8 307 aa19.94■□□□□ 0.78
CHD8-211ENST00000556833 CACNA1SQ13698 1873 aa19.94■□□□□ 0.78
CHD8-211ENST00000556833 ANKRD31Q8N7Z5 1873 aa19.93■□□□□ 0.78
CHD8-211ENST00000556833 IFFO2Q5TF58 517 aa19.93■□□□□ 0.78
CHD8-211ENST00000556833 SCN7AQ01118 1682 aa19.93■□□□□ 0.78
CHD8-211ENST00000556833 TIAM2Q8IVF5 1701 aa19.93■□□□□ 0.78
CHD8-211ENST00000556833 TNRC6CQ9HCJ0 1690 aaKnown RBP19.92■□□□□ 0.78
CHD8-211ENST00000556833 APLP1P51693 650 aa19.92■□□□□ 0.78
CHD8-211ENST00000556833 TEFQ10587 303 aa19.92■□□□□ 0.78
CHD8-211ENST00000556833 C2CD5Q86YS7 1000 aa19.92■□□□□ 0.78
CHD8-211ENST00000556833 ZNF496Q96IT1 587 aaPredicted RBP19.92■□□□□ 0.78
CHD8-211ENST00000556833 RRAGCQ9HB90 399 aa19.92■□□□□ 0.78
CHD8-211ENST00000556833 ZNF219Q9P2Y4 722 aaPredicted RBP19.92■□□□□ 0.78
CHD8-211ENST00000556833 COL11A2P13942 1736 aaPredicted RBP19.91■□□□□ 0.78
CHD8-211ENST00000556833 IL17REQ8NFR9 667 aa19.91■□□□□ 0.78
CHD8-211ENST00000556833 TBC1D2BQ9UPU7 963 aa19.9■□□□□ 0.78
CHD8-211ENST00000556833 GNAT3A8MTJ3 354 aa19.89■□□□□ 0.77
CHD8-211ENST00000556833 KCNQ3O43525 872 aa19.89■□□□□ 0.77
CHD8-211ENST00000556833 STARD3NLO95772 234 aa19.89■□□□□ 0.77
CHD8-211ENST00000556833 PIP4K2AP48426 406 aaPredicted RBP19.89■□□□□ 0.77
CHD8-211ENST00000556833 PRELPP51888 382 aa19.89■□□□□ 0.77
CHD8-211ENST00000556833 TBC1D9BQ66K14 1250 aa19.89■□□□□ 0.77
CHD8-211ENST00000556833 VSIG10Q8N0Z9 540 aa19.89■□□□□ 0.77
CHD8-211ENST00000556833 KDM2BQ8NHM5 1336 aa19.89■□□□□ 0.77
CHD8-211ENST00000556833 HEG1Q9ULI3 1381 aa19.88■□□□□ 0.77
CHD8-211ENST00000556833 ZNF790Q6PG37 636 aa19.88■□□□□ 0.77
CHD8-211ENST00000556833 GAS2L2Q8NHY3 880 aa19.88■□□□□ 0.77
CHD8-211ENST00000556833 A1BGP04217 495 aa19.87■□□□□ 0.77
CHD8-211ENST00000556833 PRKAR2BP31323 418 aa19.87■□□□□ 0.77
CHD8-211ENST00000556833 EIF5P55010 431 aaKnown RBP19.87■□□□□ 0.77
CHD8-211ENST00000556833 RBM46Q8TBY0 533 aaKnown RBP19.87■□□□□ 0.77
CHD8-211ENST00000556833 ZNF622Q969S3 477 aaKnown RBP eCLIP19.87■□□□□ 0.77
CHD8-211ENST00000556833 PHACTR3Q96KR7 559 aa19.87■□□□□ 0.77
CHD8-211ENST00000556833 H0YIN7 160 aa19.86■□□□□ 0.77
CHD8-211ENST00000556833 TTLL6Q8N841 843 aa19.86■□□□□ 0.77
CHD8-211ENST00000556833 BCORQ6W2J9 1755 aa19.85■□□□□ 0.77
CHD8-211ENST00000556833 A0A087WZG4 1122 aa19.84■□□□□ 0.77
CHD8-211ENST00000556833 DNAJC5GQ8N7S2 189 aa19.84■□□□□ 0.77
CHD8-211ENST00000556833 NPC1L1Q9UHC9 1359 aa19.83■□□□□ 0.77
CHD8-211ENST00000556833 PRAMEF22A3QJZ6 481 aa19.83■□□□□ 0.77
CHD8-211ENST00000556833 BTBD11A6QL63 1104 aa19.83■□□□□ 0.77
CHD8-211ENST00000556833 NPHP1O15259 732 aa19.83■□□□□ 0.77
CHD8-211ENST00000556833 LMNB1P20700 586 aa19.83■□□□□ 0.77
CHD8-211ENST00000556833 FMNL2Q96PY5 1086 aa19.83■□□□□ 0.77
CHD8-211ENST00000556833 NFKBIEO00221 500 aa19.82■□□□□ 0.76
CHD8-211ENST00000556833 PRR5LQ6MZQ0 368 aa19.82■□□□□ 0.76
CHD8-211ENST00000556833 MCM10Q7L590 875 aa19.82■□□□□ 0.76
CHD8-211ENST00000556833 RSPH6AQ9H0K4 717 aa19.82■□□□□ 0.76
CHD8-211ENST00000556833 C21orf2O43822 256 aa19.81■□□□□ 0.76
CHD8-211ENST00000556833 NPM2Q86SE8 214 aaKnown RBP19.81■□□□□ 0.76
CHD8-211ENST00000556833 CFAP53Q96M91 514 aa19.81■□□□□ 0.76
CHD8-211ENST00000556833 SLX4Q8IY92 1834 aa19.81■□□□□ 0.76
CHD8-211ENST00000556833 FER1L6Q2WGJ9 1857 aa19.8■□□□□ 0.76
CHD8-211ENST00000556833 U2AF1L5P0DN76 240 aaPredicted RBP19.8■□□□□ 0.76
CHD8-211ENST00000556833 U2AF1Q01081 240 aaKnown RBP eCLIP19.8■□□□□ 0.76
CHD8-211ENST00000556833 DCTN1Q14203 1278 aa19.8■□□□□ 0.76
CHD8-211ENST00000556833 CEMIPQ8WUJ3 1361 aa19.8■□□□□ 0.76
CHD8-211ENST00000556833 DICER1Q9UPY3 1922 aaKnown RBP19.79■□□□□ 0.76
CHD8-211ENST00000556833 CAMTA2O94983 1202 aa19.79■□□□□ 0.76
CHD8-211ENST00000556833 IL6STP40189 918 aaPredicted RBP19.79■□□□□ 0.76
CHD8-211ENST00000556833 FSTL1Q12841 308 aa19.79■□□□□ 0.76
CHD8-211ENST00000556833 DZIP3Q86Y13 1208 aaKnown RBP19.79■□□□□ 0.76
CHD8-211ENST00000556833 TEX13AQ9BXU3 409 aaPredicted RBP19.79■□□□□ 0.76
CHD8-211ENST00000556833 USP16Q9Y5T5 823 aa19.79■□□□□ 0.76
CHD8-211ENST00000556833 CNBD1Q8NA66 436 aa19.78■□□□□ 0.76
CHD8-211ENST00000556833 SETDB2Q96T68 719 aa19.78■□□□□ 0.76
CHD8-211ENST00000556833 GLTPD2A6NH11 291 aa19.77■□□□□ 0.76
CHD8-211ENST00000556833 PDE6BP35913 854 aa19.77■□□□□ 0.76
CHD8-211ENST00000556833 SMC1BQ8NDV3 1235 aa19.77■□□□□ 0.76
CHD8-211ENST00000556833 BRIP1Q9BX63 1249 aa19.77■□□□□ 0.76
CHD8-211ENST00000556833 FAM177BA6PVY3 158 aa19.76■□□□□ 0.75
CHD8-211ENST00000556833 PPP2R1AP30153 589 aa19.76■□□□□ 0.75
CHD8-211ENST00000556833 RTF1Q92541 710 aaKnown RBP19.76■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms