RNA–Protein interactions for RNA: ENST00000556810.5

TMEM260-212, Transcript of transmembrane protein 260, humanhuman

TSL 3

Gene TMEM260, Length 662 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-212ENST00000556810 ESF1Q9H501 851 aaKnown RBP8.81□□□□□ -1
TMEM260-212ENST00000556810 CEP126Q9P2H0 1117 aa8.81□□□□□ -1
TMEM260-212ENST00000556810 NCOA2Q15596 1464 aa8.81□□□□□ -1
TMEM260-212ENST00000556810 ABCA8O94911 1581 aa8.81□□□□□ -1
TMEM260-212ENST00000556810 MYOM3Q5VTT5 1437 aa8.8□□□□□ -1
TMEM260-212ENST00000556810 TRAK2O60296 914 aa8.8□□□□□ -1
TMEM260-212ENST00000556810 FBXO41Q8TF61 875 aa8.8□□□□□ -1
TMEM260-212ENST00000556810 NLRP3Q96P20 1036 aa8.8□□□□□ -1
TMEM260-212ENST00000556810 FGD6Q6ZV73 1430 aa8.8□□□□□ -1
TMEM260-212ENST00000556810 ITSN2Q9NZM3 1697 aa8.79□□□□□ -1
TMEM260-212ENST00000556810 PHLDB1Q86UU1 1377 aa8.79□□□□□ -1
TMEM260-212ENST00000556810 CLN3Q13286 438 aa8.79□□□□□ -1
TMEM260-212ENST00000556810 IRF5Q13568 498 aa8.79□□□□□ -1
TMEM260-212ENST00000556810 RNFT1Q5M7Z0 435 aa8.79□□□□□ -1
TMEM260-212ENST00000556810 NUP153P49790 1475 aaKnown RBP8.78□□□□□ -1
TMEM260-212ENST00000556810 RAPGEF3O95398 923 aa8.78□□□□□ -1
TMEM260-212ENST00000556810 EIF4G2P78344 907 aaKnown RBP eCLIP8.78□□□□□ -1
TMEM260-212ENST00000556810 SLC27A3Q5K4L6 730 aa8.78□□□□□ -1
TMEM260-212ENST00000556810 CCDC85AQ96PX6 553 aaPredicted RBP8.78□□□□□ -1
TMEM260-212ENST00000556810 ARHGEF10LQ9HCE6 1279 aa8.78□□□□□ -1
TMEM260-212ENST00000556810 CUEDC1Q9NWM3 386 aaPredicted RBP8.78□□□□□ -1
TMEM260-212ENST00000556810 ARAP3Q8WWN8 1544 aa8.78□□□□□ -1
TMEM260-212ENST00000556810 TROQ12816 1431 aaPredicted RBP8.77□□□□□ -1.01
TMEM260-212ENST00000556810 ATP10BO94823 1461 aa8.77□□□□□ -1.01
TMEM260-212ENST00000556810 PTPN23Q9H3S7 1636 aa8.76□□□□□ -1.01
TMEM260-212ENST00000556810 CDK13Q14004 1512 aaKnown RBP8.76□□□□□ -1.01
TMEM260-212ENST00000556810 MYCP01106 439 aaPredicted RBP8.76□□□□□ -1.01
TMEM260-212ENST00000556810 POU4F2Q12837 409 aa8.76□□□□□ -1.01
TMEM260-212ENST00000556810 CDCA7Q9BWT1 371 aaPredicted RBP8.76□□□□□ -1.01
TMEM260-212ENST00000556810 GRIP2Q9C0E4 1043 aa8.76□□□□□ -1.01
TMEM260-212ENST00000556810 GDPD2Q9HCC8 539 aa8.76□□□□□ -1.01
TMEM260-212ENST00000556810 SETD5Q9C0A6 1442 aa8.76□□□□□ -1.01
TMEM260-212ENST00000556810 GNRH1P01148 92 aa8.75□□□□□ -1.01
TMEM260-212ENST00000556810 ITGAEP38570 1179 aa8.75□□□□□ -1.01
TMEM260-212ENST00000556810 RAB6BQ9NRW1 208 aa8.75□□□□□ -1.01
TMEM260-212ENST00000556810 PTPRMP28827 1452 aa8.75□□□□□ -1.01
TMEM260-212ENST00000556810 TCOF1Q13428 1488 aaKnown RBP8.75□□□□□ -1.01
TMEM260-212ENST00000556810 ADAMTSL3P82987 1691 aa8.75□□□□□ -1.01
TMEM260-212ENST00000556810 KIF14Q15058 1648 aa8.74□□□□□ -1.01
TMEM260-212ENST00000556810 ABL2P42684 1182 aa8.74□□□□□ -1.01
TMEM260-212ENST00000556810 VAC14Q08AM6 782 aa8.74□□□□□ -1.01
TMEM260-212ENST00000556810 DYRK1BQ9Y463 629 aa8.74□□□□□ -1.01
TMEM260-212ENST00000556810 ARID4BQ4LE39 1312 aaPredicted RBP8.74□□□□□ -1.01
TMEM260-212ENST00000556810 SPATA31C2B4DYI2 1134 aa8.73□□□□□ -1.01
TMEM260-212ENST00000556810 MCM6Q14566 821 aa8.73□□□□□ -1.01
TMEM260-212ENST00000556810 SLFNL1Q499Z3 407 aa8.73□□□□□ -1.01
TMEM260-212ENST00000556810 NBPF10Q6P3W6 841 aaKnown RBP8.73□□□□□ -1.01
TMEM260-212ENST00000556810 RIPOR1Q6ZS17 1223 aa8.73□□□□□ -1.01
TMEM260-212ENST00000556810 TRIM22Q8IYM9 498 aa8.73□□□□□ -1.01
TMEM260-212ENST00000556810 PHTF2Q8N3S3 785 aa8.73□□□□□ -1.01
TMEM260-212ENST00000556810 NBPF15Q8N660 670 aa8.73□□□□□ -1.01
TMEM260-212ENST00000556810 ZNF837Q96EG3 531 aaPredicted RBP8.73□□□□□ -1.01
TMEM260-212ENST00000556810 GMCL1Q96IK5 515 aa8.73□□□□□ -1.01
TMEM260-212ENST00000556810 ESYT1Q9BSJ8 1104 aa8.73□□□□□ -1.01
TMEM260-212ENST00000556810 DOLKQ9UPQ8 538 aa8.73□□□□□ -1.01
TMEM260-212ENST00000556810 ABCA9Q8IUA7 1624 aa8.72□□□□□ -1.01
TMEM260-212ENST00000556810 IL2RAP01589 272 aa8.72□□□□□ -1.01
TMEM260-212ENST00000556810 SLURP2P0DP57 97 aa8.72□□□□□ -1.01
TMEM260-212ENST00000556810 ZNF385CQ66K41 422 aaPredicted RBP8.72□□□□□ -1.01
TMEM260-212ENST00000556810 RNF135Q8IUD6 432 aa8.72□□□□□ -1.01
TMEM260-212ENST00000556810 CNKSR1Q969H4 720 aa8.72□□□□□ -1.01
TMEM260-212ENST00000556810 GAS2L1Q99501 681 aaPredicted RBP8.72□□□□□ -1.01
TMEM260-212ENST00000556810 WASLO00401 505 aaPredicted RBP8.71□□□□□ -1.02
TMEM260-212ENST00000556810 GAS6Q14393 721 aa8.71□□□□□ -1.02
TMEM260-212ENST00000556810 WASHC4Q2M389 1173 aa8.71□□□□□ -1.02
TMEM260-212ENST00000556810 TSGA10IPQ3SY00 556 aa8.71□□□□□ -1.02
TMEM260-212ENST00000556810 WDR44Q5JSH3 913 aa8.71□□□□□ -1.02
TMEM260-212ENST00000556810 TAS1R3Q7RTX0 852 aa8.71□□□□□ -1.02
TMEM260-212ENST00000556810 SVOPQ8N4V2 548 aa8.71□□□□□ -1.02
TMEM260-212ENST00000556810 CFDP1Q9UEE9 299 aaPredicted RBP8.71□□□□□ -1.02
TMEM260-212ENST00000556810 BCORL1Q5H9F3 1711 aa8.71□□□□□ -1.02
TMEM260-212ENST00000556810 AKNAQ7Z591 1439 aa8.71□□□□□ -1.02
TMEM260-212ENST00000556810 H7C1W4 665 aa8.7□□□□□ -1.02
TMEM260-212ENST00000556810 CENPCQ03188 943 aa8.7□□□□□ -1.02
TMEM260-212ENST00000556810 USP4Q13107 963 aa8.7□□□□□ -1.02
TMEM260-212ENST00000556810 DBN1Q16643 649 aa8.7□□□□□ -1.02
TMEM260-212ENST00000556810 WHAMMQ8TF30 809 aa8.7□□□□□ -1.02
TMEM260-212ENST00000556810 XAGE2Q96GT9 111 aa8.7□□□□□ -1.02
TMEM260-212ENST00000556810 TIMMDC1Q9NPL8 285 aa8.7□□□□□ -1.02
TMEM260-212ENST00000556810 NEO1Q92859 1461 aa8.7□□□□□ -1.02
TMEM260-212ENST00000556810 ADAMTS2O95450 1211 aa8.69□□□□□ -1.02
TMEM260-212ENST00000556810 ESCO1Q5FWF5 840 aa8.69□□□□□ -1.02
TMEM260-212ENST00000556810 FOXR1Q6PIV2 292 aa8.69□□□□□ -1.02
TMEM260-212ENST00000556810 C14orf37Q86TY3 774 aa8.69□□□□□ -1.02
TMEM260-212ENST00000556810 ZSCAN10Q96SZ4 725 aaPredicted RBP8.69□□□□□ -1.02
TMEM260-212ENST00000556810 CHIC2Q9UKJ5 165 aa8.69□□□□□ -1.02
TMEM260-212ENST00000556810 ADAMTS8Q9UP79 889 aa8.69□□□□□ -1.02
TMEM260-212ENST00000556810 HRH3Q9Y5N1 445 aa8.69□□□□□ -1.02
TMEM260-212ENST00000556810 RAB3GAP2Q9H2M9 1393 aa8.69□□□□□ -1.02
TMEM260-212ENST00000556810 HFM1A2PYH4 1435 aa8.69□□□□□ -1.02
TMEM260-212ENST00000556810 FRMPD1Q5SYB0 1578 aa8.69□□□□□ -1.02
TMEM260-212ENST00000556810 MADDQ8WXG6 1647 aa8.69□□□□□ -1.02
TMEM260-212ENST00000556810 GPR25O00155 361 aa8.68□□□□□ -1.02
TMEM260-212ENST00000556810 HSPA2P54652 639 aa8.68□□□□□ -1.02
TMEM260-212ENST00000556810 SRSF11Q05519 484 aaKnown RBP8.68□□□□□ -1.02
TMEM260-212ENST00000556810 OXLD1Q5BKU9 147 aa8.68□□□□□ -1.02
TMEM260-212ENST00000556810 SIRT1Q96EB6 747 aa8.68□□□□□ -1.02
TMEM260-212ENST00000556810 ROCK1Q13464 1354 aa8.68□□□□□ -1.02
TMEM260-212ENST00000556810 LMTK3Q96Q04 1460 aa8.68□□□□□ -1.02
TMEM260-212ENST00000556810 TSPY4P0CV99 314 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms