RNA–Protein interactions for RNA: ENST00000556639.5

EFCAB11-212, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 5

Gene EFCAB11, Length 2,326 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-212ENST00000556639 MEIS3Q99687 375 aa17.48■□□□□ 0.39
EFCAB11-212ENST00000556639 MYL6BP14649 208 aa17.47■□□□□ 0.39
EFCAB11-212ENST00000556639 VPS72Q15906 364 aa17.47■□□□□ 0.39
EFCAB11-212ENST00000556639 MEX3CQ5U5Q3 659 aaKnown RBP17.47■□□□□ 0.39
EFCAB11-212ENST00000556639 ITGB4P16144 1822 aa17.47■□□□□ 0.39
EFCAB11-212ENST00000556639 BARGINQ6ZT62 677 aa17.47■□□□□ 0.39
EFCAB11-212ENST00000556639 SYTL4Q96C24 671 aaPredicted RBP17.47■□□□□ 0.39
EFCAB11-212ENST00000556639 TSHZ2Q9NRE2 1034 aa17.47■□□□□ 0.39
EFCAB11-212ENST00000556639 KCPQ6ZWJ8 1503 aa17.46■□□□□ 0.39
EFCAB11-212ENST00000556639 PI4KAP2A4QPH2 592 aa17.46■□□□□ 0.38
EFCAB11-212ENST00000556639 PRIM1P49642 420 aaKnown RBP17.46■□□□□ 0.38
EFCAB11-212ENST00000556639 AIMP1Q12904 312 aaKnown RBP17.46■□□□□ 0.38
EFCAB11-212ENST00000556639 PI4KAP1Q8N8J0 262 aa17.46■□□□□ 0.38
EFCAB11-212ENST00000556639 ACSBG1Q96GR2 724 aa17.46■□□□□ 0.38
EFCAB11-212ENST00000556639 CDCA7Q9BWT1 371 aaPredicted RBP17.46■□□□□ 0.38
EFCAB11-212ENST00000556639 PAPPAQ13219 1627 aa17.45■□□□□ 0.38
EFCAB11-212ENST00000556639 SIRT2Q8IXJ6 389 aa17.44■□□□□ 0.38
EFCAB11-212ENST00000556639 RWDD1Q9H446 243 aaPredicted RBP17.44■□□□□ 0.38
EFCAB11-212ENST00000556639 DDX21Q9NR30 783 aaKnown RBP eCLIP17.44■□□□□ 0.38
EFCAB11-212ENST00000556639 ATG3Q9NT62 314 aa17.44■□□□□ 0.38
EFCAB11-212ENST00000556639 UBR2Q8IWV8 1755 aa17.44■□□□□ 0.38
EFCAB11-212ENST00000556639 A0A0G2JS52 829 aa17.44■□□□□ 0.38
EFCAB11-212ENST00000556639 ADCY9O60503 1353 aa17.44■□□□□ 0.38
EFCAB11-212ENST00000556639 CCT4P50991 539 aaKnown RBP17.43■□□□□ 0.38
EFCAB11-212ENST00000556639 AFF2P51816 1311 aa17.43■□□□□ 0.38
EFCAB11-212ENST00000556639 LRP10Q7Z4F1 713 aa17.42■□□□□ 0.38
EFCAB11-212ENST00000556639 DOT1LQ8TEK3 1739 aa17.42■□□□□ 0.38
EFCAB11-212ENST00000556639 BCL9O00512 1426 aa17.42■□□□□ 0.38
EFCAB11-212ENST00000556639 A1BGP04217 495 aa17.42■□□□□ 0.38
EFCAB11-212ENST00000556639 RGS3P49796 1198 aa17.42■□□□□ 0.38
EFCAB11-212ENST00000556639 MYT1Q01538 1121 aa17.42■□□□□ 0.38
EFCAB11-212ENST00000556639 HDAC1Q13547 482 aaPredicted RBP17.42■□□□□ 0.38
EFCAB11-212ENST00000556639 HYPKQ9NX55 129 aa17.42■□□□□ 0.38
EFCAB11-212ENST00000556639 NBPF26B4DH59 902 aa17.41■□□□□ 0.38
EFCAB11-212ENST00000556639 NBPF14Q5TI25 921 aa17.41■□□□□ 0.38
EFCAB11-212ENST00000556639 NBPF10Q6P3W6 841 aaKnown RBP17.41■□□□□ 0.38
EFCAB11-212ENST00000556639 NBPF15Q8N660 670 aa17.41■□□□□ 0.38
EFCAB11-212ENST00000556639 XAGE3Q8WTP9 111 aa17.41■□□□□ 0.38
EFCAB11-212ENST00000556639 DNAAF4Q8WXU2 420 aa17.41■□□□□ 0.38
EFCAB11-212ENST00000556639 CHMP4AQ9BY43 222 aa17.41■□□□□ 0.38
EFCAB11-212ENST00000556639 MAP3K2Q9Y2U5 619 aa17.41■□□□□ 0.38
EFCAB11-212ENST00000556639 COPS6Q7L5N1 327 aa17.41■□□□□ 0.38
EFCAB11-212ENST00000556639 SLC4A9Q96Q91 983 aa17.41■□□□□ 0.38
EFCAB11-212ENST00000556639 RBM42Q9BTD8 480 aaKnown RBP17.41■□□□□ 0.38
EFCAB11-212ENST00000556639 PDZRN3Q9UPQ7 1066 aa17.4■□□□□ 0.38
EFCAB11-212ENST00000556639 KCNQ2O43526 872 aa17.39■□□□□ 0.38
EFCAB11-212ENST00000556639 FAM182BQ5T319 152 aa17.39■□□□□ 0.38
EFCAB11-212ENST00000556639 BEND3Q5T5X7 828 aa17.39■□□□□ 0.38
EFCAB11-212ENST00000556639 DNAJC10Q8IXB1 793 aa17.39■□□□□ 0.37
EFCAB11-212ENST00000556639 USP44Q9H0E7 712 aa17.39■□□□□ 0.37
EFCAB11-212ENST00000556639 CHMP4BQ9H444 224 aaKnown RBP17.39■□□□□ 0.37
EFCAB11-212ENST00000556639 ATP10DQ9P241 1426 aa17.38■□□□□ 0.37
EFCAB11-212ENST00000556639 KSR2Q6VAB6 950 aa17.38■□□□□ 0.37
EFCAB11-212ENST00000556639 LAMB4A4D0S4 1761 aa17.38■□□□□ 0.37
EFCAB11-212ENST00000556639 CWF19L2Q2TBE0 894 aaKnown RBP17.37■□□□□ 0.37
EFCAB11-212ENST00000556639 GJD4Q96KN9 370 aaPredicted RBP17.37■□□□□ 0.37
EFCAB11-212ENST00000556639 SRCIN1Q9C0H9 1055 aa17.37■□□□□ 0.37
EFCAB11-212ENST00000556639 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.37■□□□□ 0.37
EFCAB11-212ENST00000556639 CEP85Q6P2H3 762 aa17.37■□□□□ 0.37
EFCAB11-212ENST00000556639 PTF1AQ7RTS3 328 aa17.37■□□□□ 0.37
EFCAB11-212ENST00000556639 PXDNLA1KZ92 1463 aa17.36■□□□□ 0.37
EFCAB11-212ENST00000556639 SMC5Q8IY18 1101 aa17.36■□□□□ 0.37
EFCAB11-212ENST00000556639 NBPF7P0C2Y1 421 aaPredicted RBP17.36■□□□□ 0.37
EFCAB11-212ENST00000556639 N4BP2Q86UW6 1770 aaPredicted RBP17.36■□□□□ 0.37
EFCAB11-212ENST00000556639 RIC3Q7Z5B4 369 aa17.35■□□□□ 0.37
EFCAB11-212ENST00000556639 ANKRD44Q8N8A2 993 aa17.35■□□□□ 0.37
EFCAB11-212ENST00000556639 TTLL7Q6ZT98 887 aa17.35■□□□□ 0.37
EFCAB11-212ENST00000556639 LRRFIP2Q9Y608 721 aaKnown RBP17.35■□□□□ 0.37
EFCAB11-212ENST00000556639 GNAI2P04899 355 aa17.33■□□□□ 0.37
EFCAB11-212ENST00000556639 IGKV5-2P06315 115 aa17.33■□□□□ 0.37
EFCAB11-212ENST00000556639 ANKRD13DQ6ZTN6 518 aa17.33■□□□□ 0.37
EFCAB11-212ENST00000556639 DDX58O95786 925 aaKnown RBP17.33■□□□□ 0.36
EFCAB11-212ENST00000556639 ATRNO75882 1429 aa17.33■□□□□ 0.36
EFCAB11-212ENST00000556639 PDE4AP27815 886 aa17.32■□□□□ 0.36
EFCAB11-212ENST00000556639 QTRT2Q9H974 415 aaKnown RBP17.32■□□□□ 0.36
EFCAB11-212ENST00000556639 ZNF330Q9Y3S2 320 aaPredicted RBP17.32■□□□□ 0.36
EFCAB11-212ENST00000556639 THSD7AQ9UPZ6 1657 aa17.32■□□□□ 0.36
EFCAB11-212ENST00000556639 GNAI3P08754 354 aa17.32■□□□□ 0.36
EFCAB11-212ENST00000556639 UBTFL1P0CB47 393 aaPredicted RBP17.32■□□□□ 0.36
EFCAB11-212ENST00000556639 RPAP2Q8IXW5 612 aaPredicted RBP17.32■□□□□ 0.36
EFCAB11-212ENST00000556639 VSIG10Q8N0Z9 540 aa17.32■□□□□ 0.36
EFCAB11-212ENST00000556639 MYD88Q99836 296 aa17.32■□□□□ 0.36
EFCAB11-212ENST00000556639 TRPC5Q9UL62 973 aaPredicted RBP17.32■□□□□ 0.36
EFCAB11-212ENST00000556639 PNMA6EA0A0J9YXQ4 647 aa17.31■□□□□ 0.36
EFCAB11-212ENST00000556639 BCL11AQ9H165 835 aa17.31■□□□□ 0.36
EFCAB11-212ENST00000556639 LNPKQ9C0E8 428 aa17.31■□□□□ 0.36
EFCAB11-212ENST00000556639 ATP5J2-PTCD1G3V325 749 aa17.3■□□□□ 0.36
EFCAB11-212ENST00000556639 CYP19A1P11511 503 aaPredicted RBP17.3■□□□□ 0.36
EFCAB11-212ENST00000556639 ANKRD45Q5TZF3 282 aa17.3■□□□□ 0.36
EFCAB11-212ENST00000556639 JARID2Q92833 1246 aaPredicted RBP17.3■□□□□ 0.36
EFCAB11-212ENST00000556639 METTL22Q9BUU2 404 aaPredicted RBP17.3■□□□□ 0.36
EFCAB11-212ENST00000556639 ERBB4Q15303 1308 aa17.3■□□□□ 0.36
EFCAB11-212ENST00000556639 SEPT12Q8IYM1 358 aa17.3■□□□□ 0.36
EFCAB11-212ENST00000556639 LINS1Q8NG48 757 aa17.3■□□□□ 0.36
EFCAB11-212ENST00000556639 ZBTB3Q9H5J0 574 aa17.3■□□□□ 0.36
EFCAB11-212ENST00000556639 NUCB1Q02818 461 aa17.29■□□□□ 0.36
EFCAB11-212ENST00000556639 DCTPP1Q9H773 170 aa17.29■□□□□ 0.36
EFCAB11-212ENST00000556639 APBB1O00213 710 aa17.29■□□□□ 0.36
EFCAB11-212ENST00000556639 KCNQ4P56696 695 aa17.29■□□□□ 0.36
EFCAB11-212ENST00000556639 ARFGEF2Q9Y6D5 1785 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms