RNA–Protein interactions for RNA: ENST00000556356.1

LRP1-211, Transcript of LDL receptor related protein 1, humanhuman

TSL 2

Gene LRP1, Length 5,114 nt, Biotype retained intron, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP1-211ENST00000556356 CCDC69A6NI79 296 aa18.23■□□□□ 0.51
LRP1-211ENST00000556356 BECN2A8MW95 431 aa18.23■□□□□ 0.51
LRP1-211ENST00000556356 MAP3K12Q12852 859 aa18.22■□□□□ 0.51
LRP1-211ENST00000556356 PLEKHH1Q9ULM0 1364 aa18.22■□□□□ 0.51
LRP1-211ENST00000556356 GOLGA6L19H0YKK7 550 aa18.22■□□□□ 0.51
LRP1-211ENST00000556356 PDCP20941 246 aa18.21■□□□□ 0.51
LRP1-211ENST00000556356 SLF2Q8IX21 1173 aa18.21■□□□□ 0.51
LRP1-211ENST00000556356 ARHGAP45Q92619 1136 aa18.21■□□□□ 0.51
LRP1-211ENST00000556356 TFCP2L1Q9NZI6 479 aa18.21■□□□□ 0.51
LRP1-211ENST00000556356 USP21Q9UK80 565 aa18.21■□□□□ 0.51
LRP1-211ENST00000556356 KDM4AO75164 1064 aa18.21■□□□□ 0.51
LRP1-211ENST00000556356 UBAC1Q9BSL1 405 aa18.21■□□□□ 0.51
LRP1-211ENST00000556356 BOLA2Q9H3K6 86 aa18.21■□□□□ 0.51
LRP1-211ENST00000556356 CCDC73Q6ZRK6 1079 aa18.21■□□□□ 0.51
LRP1-211ENST00000556356 TRIM22Q8IYM9 498 aa18.21■□□□□ 0.51
LRP1-211ENST00000556356 ZNF287Q9HBT7 754 aa18.21■□□□□ 0.51
LRP1-211ENST00000556356 USP5P45974 858 aa18.2■□□□□ 0.5
LRP1-211ENST00000556356 KRT32Q14532 448 aa18.2■□□□□ 0.5
LRP1-211ENST00000556356 DZIP3Q86Y13 1208 aaKnown RBP18.2■□□□□ 0.5
LRP1-211ENST00000556356 KSR2Q6VAB6 950 aa18.2■□□□□ 0.5
LRP1-211ENST00000556356 CCDC8Q9H0W5 538 aaPredicted RBP18.2■□□□□ 0.5
LRP1-211ENST00000556356 NIP7Q9Y221 180 aaKnown RBP eCLIP18.2■□□□□ 0.52e-9■■■□□ 16
LRP1-211ENST00000556356 METP08581 1390 aa18.2■□□□□ 0.5
LRP1-211ENST00000556356 SMARCA5O60264 1052 aaPredicted RBP18.2■□□□□ 0.5
LRP1-211ENST00000556356 NPC1L1Q9UHC9 1359 aa18.19■□□□□ 0.5
LRP1-211ENST00000556356 CLASP1Q7Z460 1538 aa18.19■□□□□ 0.5
LRP1-211ENST00000556356 ALDH1L1O75891 902 aa18.19■□□□□ 0.5
LRP1-211ENST00000556356 NLRP3Q96P20 1036 aa18.19■□□□□ 0.5
LRP1-211ENST00000556356 IMMTQ16891 758 aaKnown RBP18.19■□□□□ 0.5
LRP1-211ENST00000556356 BLOC1S2Q6QNY1 142 aa18.19■□□□□ 0.5
LRP1-211ENST00000556356 NYXQ9GZU5 481 aa18.19■□□□□ 0.5
LRP1-211ENST00000556356 RSPH6AQ9H0K4 717 aa18.19■□□□□ 0.5
LRP1-211ENST00000556356 PHACTR3Q96KR7 559 aa18.18■□□□□ 0.5
LRP1-211ENST00000556356 FAM98CQ17RN3 349 aaKnown RBP18.18■□□□□ 0.5
LRP1-211ENST00000556356 C8orf58Q8NAV2 365 aa18.18■□□□□ 0.5
LRP1-211ENST00000556356 NUP133Q8WUM0 1156 aa18.18■□□□□ 0.5
LRP1-211ENST00000556356 C20orf194Q5TEA3 1177 aa18.18■□□□□ 0.5
LRP1-211ENST00000556356 PLXNC1O60486 1568 aa18.18■□□□□ 0.5
LRP1-211ENST00000556356 PER1O15534 1290 aaPredicted RBP18.17■□□□□ 0.5
LRP1-211ENST00000556356 POLR3DP05423 398 aaPredicted RBP18.17■□□□□ 0.5
LRP1-211ENST00000556356 UTP14AQ9BVJ6 771 aaKnown RBP18.17■□□□□ 0.5
LRP1-211ENST00000556356 POLD1P28340 1107 aa18.17■□□□□ 0.5
LRP1-211ENST00000556356 IL13P35225 146 aa18.17■□□□□ 0.5
LRP1-211ENST00000556356 TSR1Q2NL82 804 aaKnown RBP18.17■□□□□ 0.5
LRP1-211ENST00000556356 ANKRD18AQ8IVF6 992 aa18.17■□□□□ 0.5
LRP1-211ENST00000556356 CRACR2BQ8N4Y2 399 aaPredicted RBP18.17■□□□□ 0.5
LRP1-211ENST00000556356 ANKRD20A12PQ8NF67 263 aa18.17■□□□□ 0.5
LRP1-211ENST00000556356 TPTE2Q6XPS3 522 aa18.16■□□□□ 0.5
LRP1-211ENST00000556356 JARID2Q92833 1246 aaPredicted RBP18.16■□□□□ 0.5
LRP1-211ENST00000556356 PTPRTO14522 1441 aa18.16■□□□□ 0.5
LRP1-211ENST00000556356 ABCC3O15438 1527 aa18.16■□□□□ 0.5
LRP1-211ENST00000556356 SOGA3Q5TF21 947 aa18.15■□□□□ 0.5
LRP1-211ENST00000556356 LDHCP07864 332 aa18.15■□□□□ 0.5
LRP1-211ENST00000556356 PARP3Q9Y6F1 533 aa18.15■□□□□ 0.5
LRP1-211ENST00000556356 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.15■□□□□ 0.5
LRP1-211ENST00000556356 TPM1P09493 284 aa18.15■□□□□ 0.5
LRP1-211ENST00000556356 ATP2B1P20020 1258 aa18.15■□□□□ 0.5
LRP1-211ENST00000556356 SOS1Q07889 1333 aaPredicted RBP18.15■□□□□ 0.5
LRP1-211ENST00000556356 PIP4K2AP48426 406 aaPredicted RBP18.15■□□□□ 0.5
LRP1-211ENST00000556356 CCNL1Q9UK58 526 aaPredicted RBP18.15■□□□□ 0.5
LRP1-211ENST00000556356 TTF1Q15361 905 aaPredicted RBP18.14■□□□□ 0.49
LRP1-211ENST00000556356 U3KPZ7 1027 aaPredicted RBP18.14■□□□□ 0.49
LRP1-211ENST00000556356 GRM8O00222 908 aa18.14■□□□□ 0.49
LRP1-211ENST00000556356 JAKMIP1Q96N16 626 aaKnown RBP18.14■□□□□ 0.49
LRP1-211ENST00000556356 CEP89Q96ST8 783 aa18.14■□□□□ 0.49
LRP1-211ENST00000556356 NAPBQ9H115 298 aa18.14■□□□□ 0.49
LRP1-211ENST00000556356 STK32BQ9NY57 414 aa18.14■□□□□ 0.49
LRP1-211ENST00000556356 CDKL5O76039 1030 aa18.13■□□□□ 0.49
LRP1-211ENST00000556356 MRPL50Q8N5N7 158 aaKnown RBP18.13■□□□□ 0.49
LRP1-211ENST00000556356 GNPATO15228 680 aa18.13■□□□□ 0.49
LRP1-211ENST00000556356 ECHDC1Q9NTX5 307 aa18.13■□□□□ 0.49
LRP1-211ENST00000556356 MPHOSPH10O00566 681 aaKnown RBP18.13■□□□□ 0.49
LRP1-211ENST00000556356 TRAPPC3LQ5T215 181 aa18.13■□□□□ 0.49
LRP1-211ENST00000556356 BABAM1Q9NWV8 329 aa18.13■□□□□ 0.49
LRP1-211ENST00000556356 MYOM2P54296 1465 aa18.13■□□□□ 0.49
LRP1-211ENST00000556356 STK3Q13188 491 aa18.13■□□□□ 0.49
LRP1-211ENST00000556356 SPTY2D1Q68D10 685 aaPredicted RBP18.13■□□□□ 0.49
LRP1-211ENST00000556356 LINS1Q8NG48 757 aa18.13■□□□□ 0.49
LRP1-211ENST00000556356 MKNK2Q9HBH9 465 aa18.12■□□□□ 0.49
LRP1-211ENST00000556356 PDRG1Q9NUG6 133 aa18.12■□□□□ 0.49
LRP1-211ENST00000556356 MINDY4BA8MYZ0 360 aa18.12■□□□□ 0.49
LRP1-211ENST00000556356 TPM3P06753 285 aa18.12■□□□□ 0.49
LRP1-211ENST00000556356 NAP1L5Q96NT1 182 aaPredicted RBP18.12■□□□□ 0.49
LRP1-211ENST00000556356 UQCRFS1P1P0C7P4 283 aa18.12■□□□□ 0.49
LRP1-211ENST00000556356 SBNO2Q9Y2G9 1366 aa18.12■□□□□ 0.49
LRP1-211ENST00000556356 KDM5CP41229 1560 aa18.12■□□□□ 0.49
LRP1-211ENST00000556356 ZNF396Q96N95 335 aaPredicted RBP18.11■□□□□ 0.49
LRP1-211ENST00000556356 SHROOM2Q13796 1616 aa18.11■□□□□ 0.49
LRP1-211ENST00000556356 ZNF790Q6PG37 636 aa18.11■□□□□ 0.49
LRP1-211ENST00000556356 ADCY10Q96PN6 1610 aa18.11■□□□□ 0.49
LRP1-211ENST00000556356 DEKP35659 375 aaKnown RBP18.11■□□□□ 0.49
LRP1-211ENST00000556356 PRDM15P57071 1507 aaPredicted RBP18.11■□□□□ 0.49
LRP1-211ENST00000556356 ZSCAN31Q96LW9 406 aaPredicted RBP18.1■□□□□ 0.49
LRP1-211ENST00000556356 SPATA31E1Q6ZUB1 1445 aa18.1■□□□□ 0.49
LRP1-211ENST00000556356 ARHGAP31Q2M1Z3 1444 aa18.1■□□□□ 0.49
LRP1-211ENST00000556356 LMBR1LQ6UX01 489 aa18.1■□□□□ 0.49
LRP1-211ENST00000556356 TXLNAP40222 546 aa18.1■□□□□ 0.49
LRP1-211ENST00000556356 CDK5RAP3Q96JB5 506 aa18.1■□□□□ 0.49
LRP1-211ENST00000556356 PCMTD1Q96MG8 357 aaPredicted RBP18.1■□□□□ 0.49
LRP1-211ENST00000556356 SASS6Q6UVJ0 657 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms