RNA–Protein interactions for RNA: ENST00000556343.1

ACTN1-218, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 274 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-218ENST00000556343 DNAJC10Q8IXB1 793 aa11.71□□□□□ -0.53
ACTN1-218ENST00000556343 DZIP1LQ8IYY4 767 aaKnown RBP11.71□□□□□ -0.53
ACTN1-218ENST00000556343 CHPF2Q9P2E5 772 aa11.71□□□□□ -0.53
ACTN1-218ENST00000556343 RGS12O14924 1447 aa11.7□□□□□ -0.54
ACTN1-218ENST00000556343 SIPA1L3O60292 1781 aaPredicted RBP11.7□□□□□ -0.54
ACTN1-218ENST00000556343 KDM3BQ7LBC6 1761 aa11.7□□□□□ -0.54
ACTN1-218ENST00000556343 FLIIQ13045 1269 aa11.7□□□□□ -0.54
ACTN1-218ENST00000556343 FKBP5Q13451 457 aaPredicted RBP11.7□□□□□ -0.54
ACTN1-218ENST00000556343 SLC27A3Q5K4L6 730 aa11.7□□□□□ -0.54
ACTN1-218ENST00000556343 PRAMEF22A3QJZ6 481 aa11.69□□□□□ -0.54
ACTN1-218ENST00000556343 APBA3O96018 575 aa11.69□□□□□ -0.54
ACTN1-218ENST00000556343 MYL6BP14649 208 aa11.69□□□□□ -0.54
ACTN1-218ENST00000556343 AAMPQ13685 434 aa11.69□□□□□ -0.54
ACTN1-218ENST00000556343 FKBP8Q14318 412 aa11.69□□□□□ -0.54
ACTN1-218ENST00000556343 CCNL1Q9UK58 526 aaPredicted RBP11.69□□□□□ -0.54
ACTN1-218ENST00000556343 PLSCR1O15162 318 aa11.68□□□□□ -0.54
ACTN1-218ENST00000556343 A1BGP04217 495 aa11.68□□□□□ -0.54
ACTN1-218ENST00000556343 CYP19A1P11511 503 aaPredicted RBP11.68□□□□□ -0.54
ACTN1-218ENST00000556343 TRIM27P14373 513 aa11.68□□□□□ -0.54
ACTN1-218ENST00000556343 VIRMAQ69YN4 1812 aaKnown RBP11.67□□□□□ -0.54
ACTN1-218ENST00000556343 KCPQ6ZWJ8 1503 aa11.67□□□□□ -0.54
ACTN1-218ENST00000556343 DOT1LQ8TEK3 1739 aa11.67□□□□□ -0.54
ACTN1-218ENST00000556343 TOGARAM1Q9Y4F4 1720 aa11.67□□□□□ -0.54
ACTN1-218ENST00000556343 A0A087WZG4 1122 aa11.67□□□□□ -0.54
ACTN1-218ENST00000556343 IL6STP40189 918 aaPredicted RBP11.67□□□□□ -0.54
ACTN1-218ENST00000556343 CCT4P50991 539 aaKnown RBP11.67□□□□□ -0.54
ACTN1-218ENST00000556343 NEXNQ0ZGT2 675 aa11.67□□□□□ -0.54
ACTN1-218ENST00000556343 AIMP1Q12904 312 aaKnown RBP11.67□□□□□ -0.54
ACTN1-218ENST00000556343 RC3H1Q5TC82 1133 aaKnown RBP11.67□□□□□ -0.54
ACTN1-218ENST00000556343 KIF6Q6ZMV9 814 aa11.67□□□□□ -0.54
ACTN1-218ENST00000556343 COPS6Q7L5N1 327 aa11.67□□□□□ -0.54
ACTN1-218ENST00000556343 RIC3Q7Z5B4 369 aa11.67□□□□□ -0.54
ACTN1-218ENST00000556343 XAGE3Q8WTP9 111 aa11.67□□□□□ -0.54
ACTN1-218ENST00000556343 CLUAP1Q96AJ1 413 aa11.67□□□□□ -0.54
ACTN1-218ENST00000556343 CCDC87Q9NVE4 849 aa11.67□□□□□ -0.54
ACTN1-218ENST00000556343 DDX19BQ9UMR2 479 aa11.67□□□□□ -0.54
ACTN1-218ENST00000556343 ITGB4P16144 1822 aa11.66□□□□□ -0.54
ACTN1-218ENST00000556343 PDIA6Q15084 440 aa11.66□□□□□ -0.54
ACTN1-218ENST00000556343 KSR2Q6VAB6 950 aa11.66□□□□□ -0.54
ACTN1-218ENST00000556343 ANKRD13DQ6ZTN6 518 aa11.66□□□□□ -0.54
ACTN1-218ENST00000556343 G2E3Q7L622 706 aa11.66□□□□□ -0.54
ACTN1-218ENST00000556343 CCDC125Q86Z20 511 aa11.66□□□□□ -0.54
ACTN1-218ENST00000556343 SLC4A9Q96Q91 983 aa11.66□□□□□ -0.54
ACTN1-218ENST00000556343 PHAXQ9H814 394 aaKnown RBP11.66□□□□□ -0.54
ACTN1-218ENST00000556343 HDAC5Q9UQL6 1122 aa11.66□□□□□ -0.54
ACTN1-218ENST00000556343 ANXA1P04083 346 aa11.65□□□□□ -0.54
ACTN1-218ENST00000556343 CRKLP46109 303 aaKnown RBP11.65□□□□□ -0.54
ACTN1-218ENST00000556343 IRX6P78412 446 aaPredicted RBP11.65□□□□□ -0.54
ACTN1-218ENST00000556343 MVPQ14764 893 aaKnown RBP11.65□□□□□ -0.54
ACTN1-218ENST00000556343 SLC4A10Q6U841 1118 aa11.65□□□□□ -0.54
ACTN1-218ENST00000556343 PTF1AQ7RTS3 328 aa11.65□□□□□ -0.54
ACTN1-218ENST00000556343 ITPRIPQ8IWB1 547 aa11.65□□□□□ -0.54
ACTN1-218ENST00000556343 PLBD2Q8NHP8 589 aa11.65□□□□□ -0.54
ACTN1-218ENST00000556343 PANK1Q8TE04 598 aa11.65□□□□□ -0.54
ACTN1-218ENST00000556343 DNAAF4Q8WXU2 420 aa11.65□□□□□ -0.54
ACTN1-218ENST00000556343 ARXQ96QS3 562 aa11.65□□□□□ -0.54
ACTN1-218ENST00000556343 ZNF330Q9Y3S2 320 aaPredicted RBP11.65□□□□□ -0.54
ACTN1-218ENST00000556343 GTF3C3Q9Y5Q9 886 aa11.65□□□□□ -0.54
ACTN1-218ENST00000556343 NHSQ6T4R5 1651 aa11.65□□□□□ -0.55
ACTN1-218ENST00000556343 CNTNAP4Q9C0A0 1308 aa11.64□□□□□ -0.55
ACTN1-218ENST00000556343 PI4KAP2A4QPH2 592 aa11.64□□□□□ -0.55
ACTN1-218ENST00000556343 NBPF26B4DH59 902 aa11.64□□□□□ -0.55
ACTN1-218ENST00000556343 BAG6P46379 1132 aa11.64□□□□□ -0.55
ACTN1-218ENST00000556343 ITPK1Q13572 414 aa11.64□□□□□ -0.55
ACTN1-218ENST00000556343 PROSER3Q2NL68 480 aa11.64□□□□□ -0.55
ACTN1-218ENST00000556343 NBPF14Q5TI25 921 aa11.64□□□□□ -0.55
ACTN1-218ENST00000556343 INTS3Q68E01 1043 aaKnown RBP11.64□□□□□ -0.55
ACTN1-218ENST00000556343 NBPF10Q6P3W6 841 aaKnown RBP11.64□□□□□ -0.55
ACTN1-218ENST00000556343 NBPF15Q8N660 670 aa11.64□□□□□ -0.55
ACTN1-218ENST00000556343 PI4KAP1Q8N8J0 262 aa11.64□□□□□ -0.55
ACTN1-218ENST00000556343 AK7Q96M32 723 aa11.64□□□□□ -0.55
ACTN1-218ENST00000556343 CRBNQ96SW2 442 aa11.64□□□□□ -0.55
ACTN1-218ENST00000556343 COG6Q9Y2V7 657 aa11.64□□□□□ -0.55
ACTN1-218ENST00000556343 PAPPAQ13219 1627 aa11.64□□□□□ -0.55
ACTN1-218ENST00000556343 ABCC4O15439 1325 aa11.63□□□□□ -0.55
ACTN1-218ENST00000556343 TXNRD1Q16881 649 aa11.63□□□□□ -0.55
ACTN1-218ENST00000556343 HSP90AB3PQ58FF7 597 aa11.63□□□□□ -0.55
ACTN1-218ENST00000556343 INTS5Q6P9B9 1019 aaKnown RBP11.63□□□□□ -0.55
ACTN1-218ENST00000556343 TMEM57Q8N5G2 664 aa11.63□□□□□ -0.55
ACTN1-218ENST00000556343 LINC00116Q8NCU8 138 aa11.63□□□□□ -0.55
ACTN1-218ENST00000556343 ZBTB1Q9Y2K1 713 aa11.63□□□□□ -0.55
ACTN1-218ENST00000556343 MAP3K2Q9Y2U5 619 aa11.63□□□□□ -0.55
ACTN1-218ENST00000556343 RTCBQ9Y3I0 505 aaKnown RBP11.63□□□□□ -0.55
ACTN1-218ENST00000556343 UBR2Q8IWV8 1755 aa11.62□□□□□ -0.55
ACTN1-218ENST00000556343 ERVV-1B6SEH8 477 aa11.62□□□□□ -0.55
ACTN1-218ENST00000556343 RPS6KA4O75676 772 aa11.62□□□□□ -0.55
ACTN1-218ENST00000556343 ALDH1L1O75891 902 aa11.62□□□□□ -0.55
ACTN1-218ENST00000556343 PIP4K2AP48426 406 aaPredicted RBP11.62□□□□□ -0.55
ACTN1-218ENST00000556343 EIF5P55010 431 aaKnown RBP11.62□□□□□ -0.55
ACTN1-218ENST00000556343 C20orf194Q5TEA3 1177 aa11.62□□□□□ -0.55
ACTN1-218ENST00000556343 EXOC6Q8TAG9 804 aa11.62□□□□□ -0.55
ACTN1-218ENST00000556343 SRCIN1Q9C0H9 1055 aa11.62□□□□□ -0.55
ACTN1-218ENST00000556343 ZNF652Q9Y2D9 606 aa11.62□□□□□ -0.55
ACTN1-218ENST00000556343 BRWD3Q6RI45 1802 aa11.62□□□□□ -0.55
ACTN1-218ENST00000556343 CACNA1FO60840 1977 aa11.61□□□□□ -0.55
ACTN1-218ENST00000556343 F6X3S4 739 aa11.61□□□□□ -0.55
ACTN1-218ENST00000556343 RGL2O15211 777 aa11.61□□□□□ -0.55
ACTN1-218ENST00000556343 ADRA2BP18089 450 aa11.61□□□□□ -0.55
ACTN1-218ENST00000556343 TRAPPC3LQ5T215 181 aa11.61□□□□□ -0.55
ACTN1-218ENST00000556343 LRP10Q7Z4F1 713 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms