RNA–Protein interactions for RNA: ENST00000556240.1

GPHN-212, Transcript of gephyrin, humanhuman

TSL 3

Gene GPHN, Length 404 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-212ENST00000556240 SKIP12755 728 aa7.49□□□□□ -1.21
GPHN-212ENST00000556240 ATP4AP20648 1035 aa7.49□□□□□ -1.21
GPHN-212ENST00000556240 AMPD1P23109 780 aa7.49□□□□□ -1.21
GPHN-212ENST00000556240 FIGNL1Q6PIW4 674 aa7.49□□□□□ -1.21
GPHN-212ENST00000556240 SLCO4C1Q6ZQN7 724 aa7.49□□□□□ -1.21
GPHN-212ENST00000556240 AIDAQ96BJ3 306 aa7.49□□□□□ -1.21
GPHN-212ENST00000556240 CALR3Q96L12 384 aaKnown RBP7.49□□□□□ -1.21
GPHN-212ENST00000556240 DNAAF2Q9NVR5 837 aaKnown RBP7.49□□□□□ -1.21
GPHN-212ENST00000556240 SERTAD1Q9UHV2 236 aa7.49□□□□□ -1.21
GPHN-212ENST00000556240 GGA1Q9UJY5 639 aa7.49□□□□□ -1.21
GPHN-212ENST00000556240 SMTNP53814 917 aa7.48□□□□□ -1.21
GPHN-212ENST00000556240 EML3Q32P44 896 aa7.48□□□□□ -1.21
GPHN-212ENST00000556240 FNBP4Q8N3X1 1017 aaPredicted RBP7.48□□□□□ -1.21
GPHN-212ENST00000556240 C1orf216Q8TAB5 229 aa7.48□□□□□ -1.21
GPHN-212ENST00000556240 ZCCHC2Q9C0B9 1178 aaKnown RBP7.48□□□□□ -1.21
GPHN-212ENST00000556240 POM121CA8CG34 1229 aa7.47□□□□□ -1.21
GPHN-212ENST00000556240 NLRP8Q86W28 1048 aa7.47□□□□□ -1.21
GPHN-212ENST00000556240 GLMNQ92990 594 aa7.47□□□□□ -1.21
GPHN-212ENST00000556240 ZMYND15Q9H091 742 aa7.47□□□□□ -1.21
GPHN-212ENST00000556240 NOD1Q9Y239 953 aa7.47□□□□□ -1.21
GPHN-212ENST00000556240 PCDHGC4Q9Y5F7 938 aa7.47□□□□□ -1.21
GPHN-212ENST00000556240 KRBA1A5PL33 1030 aa7.46□□□□□ -1.22
GPHN-212ENST00000556240 ATXN7O15265 892 aaPredicted RBP7.46□□□□□ -1.22
GPHN-212ENST00000556240 ARAFP10398 606 aa7.46□□□□□ -1.22
GPHN-212ENST00000556240 NBPF1Q3BBV0 1214 aa7.46□□□□□ -1.22
GPHN-212ENST00000556240 ARSJQ5FYB0 599 aaPredicted RBP7.46□□□□□ -1.22
GPHN-212ENST00000556240 C14orf37Q86TY3 774 aa7.46□□□□□ -1.22
GPHN-212ENST00000556240 A0A1W2PNR3 127 aa7.45□□□□□ -1.22
GPHN-212ENST00000556240 DCDC2BA2VCK2 349 aa7.45□□□□□ -1.22
GPHN-212ENST00000556240 NEURL1BA8MQ27 555 aa7.45□□□□□ -1.22
GPHN-212ENST00000556240 TMEM229AB2RXF0 380 aa7.45□□□□□ -1.22
GPHN-212ENST00000556240 ADAM23O75077 832 aa7.45□□□□□ -1.22
GPHN-212ENST00000556240 EPXP11678 715 aa7.45□□□□□ -1.22
GPHN-212ENST00000556240 COL8A1P27658 744 aa7.45□□□□□ -1.22
GPHN-212ENST00000556240 GRIN2CQ14957 1233 aa7.45□□□□□ -1.22
GPHN-212ENST00000556240 ALYREFQ86V81 257 aaKnown RBP7.45□□□□□ -1.22
GPHN-212ENST00000556240 TRIM50Q86XT4 487 aa7.45□□□□□ -1.22
GPHN-212ENST00000556240 A6NJY4 79 aa7.44□□□□□ -1.22
GPHN-212ENST00000556240 USP17L5A8MUK1 530 aa7.44□□□□□ -1.22
GPHN-212ENST00000556240 PIK3CDO00329 1044 aa7.44□□□□□ -1.22
GPHN-212ENST00000556240 CDK2AP1O14519 115 aa7.44□□□□□ -1.22
GPHN-212ENST00000556240 HOXB4P17483 251 aaPredicted RBP7.44□□□□□ -1.22
GPHN-212ENST00000556240 TATP17735 454 aaPredicted RBP7.44□□□□□ -1.22
GPHN-212ENST00000556240 LINC00114Q6XXX2 140 aa7.44□□□□□ -1.22
GPHN-212ENST00000556240 ZNF295-AS1Q8N0V1 137 aa7.44□□□□□ -1.22
GPHN-212ENST00000556240 BTBD6Q96KE9 485 aa7.44□□□□□ -1.22
GPHN-212ENST00000556240 SLC4A9Q96Q91 983 aa7.44□□□□□ -1.22
GPHN-212ENST00000556240 IQSEC3Q9UPP2 1182 aaPredicted RBP7.44□□□□□ -1.22
GPHN-212ENST00000556240 RBM19Q9Y4C8 960 aaKnown RBP7.44□□□□□ -1.22
GPHN-212ENST00000556240 USP3Q9Y6I4 520 aa7.44□□□□□ -1.22
GPHN-212ENST00000556240 ATP9BO43861 1147 aa7.43□□□□□ -1.22
GPHN-212ENST00000556240 MAPTP10636 758 aaKnown RBP7.43□□□□□ -1.22
GPHN-212ENST00000556240 CD33P20138 364 aa7.43□□□□□ -1.22
GPHN-212ENST00000556240 PSME1Q06323 249 aa7.43□□□□□ -1.22
GPHN-212ENST00000556240 MTFR1Q15390 333 aa7.43□□□□□ -1.22
GPHN-212ENST00000556240 SUV39H2Q9H5I1 410 aa7.43□□□□□ -1.22
GPHN-212ENST00000556240 CABP1Q9NZU7 370 aa7.43□□□□□ -1.22
GPHN-212ENST00000556240 PCDHGA11Q9Y5H2 935 aa7.43□□□□□ -1.22
GPHN-212ENST00000556240 PIK3R2O00459 728 aa7.42□□□□□ -1.22
GPHN-212ENST00000556240 GNB5O14775 395 aa7.42□□□□□ -1.22
GPHN-212ENST00000556240 KHNYNO15037 678 aaKnown RBP7.42□□□□□ -1.22
GPHN-212ENST00000556240 ATP1A2P50993 1020 aa7.42□□□□□ -1.22
GPHN-212ENST00000556240 TNP2Q05952 138 aa7.42□□□□□ -1.22
GPHN-212ENST00000556240 ZDHHC3Q9NYG2 299 aa7.42□□□□□ -1.22
GPHN-212ENST00000556240 HCN2Q9UL51 889 aa7.42□□□□□ -1.22
GPHN-212ENST00000556240 ZNF777Q9ULD5 760 aaPredicted RBP7.42□□□□□ -1.22
GPHN-212ENST00000556240 GJA3Q9Y6H8 435 aa7.42□□□□□ -1.22
GPHN-212ENST00000556240 ADH6P28332 368 aa7.41□□□□□ -1.22
GPHN-212ENST00000556240 BAG6P46379 1132 aa7.41□□□□□ -1.22
GPHN-212ENST00000556240 DGKGP49619 791 aa7.41□□□□□ -1.22
GPHN-212ENST00000556240 NCOA4Q13772 614 aa7.41□□□□□ -1.22
GPHN-212ENST00000556240 PLEKHM2Q8IWE5 1019 aa7.41□□□□□ -1.22
GPHN-212ENST00000556240 ZIC5Q96T25 663 aa7.41□□□□□ -1.22
GPHN-212ENST00000556240 PARP3Q9Y6F1 533 aa7.41□□□□□ -1.22
GPHN-212ENST00000556240 USP17L3A6NCW0 530 aa7.4□□□□□ -1.22
GPHN-212ENST00000556240 USP17L4A6NCW7 530 aa7.4□□□□□ -1.22
GPHN-212ENST00000556240 BACH1O14867 736 aa7.4□□□□□ -1.22
GPHN-212ENST00000556240 GTF2IP78347 998 aa7.4□□□□□ -1.22
GPHN-212ENST00000556240 FAM182BQ5T319 152 aa7.4□□□□□ -1.22
GPHN-212ENST00000556240 USP17L2Q6R6M4 530 aa7.4□□□□□ -1.22
GPHN-212ENST00000556240 BICDL1Q6ZP65 573 aa7.4□□□□□ -1.22
GPHN-212ENST00000556240 CHSY3Q70JA7 882 aa7.4□□□□□ -1.22
GPHN-212ENST00000556240 USP17L1Q7RTZ2 530 aa7.4□□□□□ -1.22
GPHN-212ENST00000556240 ADAMTS19Q8TE59 1207 aa7.4□□□□□ -1.22
GPHN-212ENST00000556240 K7ELQ4 463 aaPredicted RBP7.39□□□□□ -1.23
GPHN-212ENST00000556240 FAM157BP0CG42 384 aa7.39□□□□□ -1.23
GPHN-212ENST00000556240 FCHSD1Q86WN1 690 aa7.39□□□□□ -1.23
GPHN-212ENST00000556240 DEPDC4Q8N2C3 294 aa7.39□□□□□ -1.23
GPHN-212ENST00000556240 AVENQ9NQS1 362 aaPredicted RBP7.39□□□□□ -1.23
GPHN-212ENST00000556240 NOP53Q9NZM5 478 aaKnown RBP7.39□□□□□ -1.23
GPHN-212ENST00000556240 KLF15Q9UIH9 416 aa7.39□□□□□ -1.23
GPHN-212ENST00000556240 TXLNAP40222 546 aa7.38□□□□□ -1.23
GPHN-212ENST00000556240 PCBP4P57723 403 aaKnown RBP7.38□□□□□ -1.23
GPHN-212ENST00000556240 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.38□□□□□ -1.23
GPHN-212ENST00000556240 CCDC97Q96F63 343 aaPredicted RBP7.38□□□□□ -1.23
GPHN-212ENST00000556240 ZNF358Q9NW07 568 aa7.38□□□□□ -1.23
GPHN-212ENST00000556240 SCHIP1Q9P0W5 487 aaPredicted RBP7.38□□□□□ -1.23
GPHN-212ENST00000556240 TFIP11Q9UBB9 837 aaKnown RBP7.38□□□□□ -1.23
GPHN-212ENST00000556240 PRR12Q9ULL5 1215 aa7.38□□□□□ -1.23
GPHN-212ENST00000556240 PALM3A6NDB9 673 aaPredicted RBP7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms