RNA–Protein interactions for RNA: ENST00000556092.5

SEC23A-212, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 4

Gene SEC23A, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-212ENST00000556092 IL17REQ8NFR9 667 aa18.91■□□□□ 0.62
SEC23A-212ENST00000556092 RSPH6AQ9H0K4 717 aa18.91■□□□□ 0.62
SEC23A-212ENST00000556092 SCN7AQ01118 1682 aa18.91■□□□□ 0.62
SEC23A-212ENST00000556092 NRXN2Q9P2S2 1712 aa18.91■□□□□ 0.62
SEC23A-212ENST00000556092 VSIG10Q8N0Z9 540 aa18.9■□□□□ 0.62
SEC23A-212ENST00000556092 NUDCQ9Y266 331 aa18.9■□□□□ 0.62
SEC23A-212ENST00000556092 DLG5Q8TDM6 1919 aa18.9■□□□□ 0.62
SEC23A-212ENST00000556092 SENP3-EIF4A1A0A087X0R7 540 aa18.89■□□□□ 0.61
SEC23A-212ENST00000556092 ZNF526Q8TF50 670 aaPredicted RBP18.89■□□□□ 0.61
SEC23A-212ENST00000556092 PHACTR3Q96KR7 559 aa18.89■□□□□ 0.61
SEC23A-212ENST00000556092 DLEC1Q9Y238 1755 aa18.88■□□□□ 0.61
SEC23A-212ENST00000556092 POLRMTO00411 1230 aaKnown RBP18.88■□□□□ 0.61
SEC23A-212ENST00000556092 U2AF1L5P0DN76 240 aaPredicted RBP18.88■□□□□ 0.61
SEC23A-212ENST00000556092 U2AF1Q01081 240 aaKnown RBP eCLIP18.88■□□□□ 0.61
SEC23A-212ENST00000556092 ZNF496Q96IT1 587 aaPredicted RBP18.88■□□□□ 0.61
SEC23A-212ENST00000556092 CEMIPQ8WUJ3 1361 aa18.88■□□□□ 0.61
SEC23A-212ENST00000556092 HEG1Q9ULI3 1381 aa18.88■□□□□ 0.61
SEC23A-212ENST00000556092 FCHSD2O94868 740 aa18.87■□□□□ 0.61
SEC23A-212ENST00000556092 CANXP27824 592 aaKnown RBP18.87■□□□□ 0.61
SEC23A-212ENST00000556092 ZNF790Q6PG37 636 aa18.87■□□□□ 0.61
SEC23A-212ENST00000556092 GPBP1L1Q9HC44 474 aaPredicted RBP18.87■□□□□ 0.61
SEC23A-212ENST00000556092 NARFQ9UHQ1 456 aa18.87■□□□□ 0.61
SEC23A-212ENST00000556092 BCORQ6W2J9 1755 aa18.86■□□□□ 0.61
SEC23A-212ENST00000556092 STARD3NLO95772 234 aa18.85■□□□□ 0.61
SEC23A-212ENST00000556092 TM4SF1P30408 202 aa18.85■□□□□ 0.61
SEC23A-212ENST00000556092 SBF1O95248 1867 aa18.84■□□□□ 0.61
SEC23A-212ENST00000556092 KCNA3P22001 575 aa18.84■□□□□ 0.61
SEC23A-212ENST00000556092 NFIXQ14938 502 aa18.84■□□□□ 0.61
SEC23A-212ENST00000556092 ARHGAP27Q6ZUM4 889 aa18.84■□□□□ 0.61
SEC23A-212ENST00000556092 BCL2L12Q9HB09 334 aa18.84■□□□□ 0.61
SEC23A-212ENST00000556092 ZNF330Q9Y3S2 320 aaPredicted RBP18.84■□□□□ 0.61
SEC23A-212ENST00000556092 CHRNA5P30532 468 aa18.83■□□□□ 0.6
SEC23A-212ENST00000556092 FMNL2Q96PY5 1086 aa18.83■□□□□ 0.6
SEC23A-212ENST00000556092 PIM2Q9P1W9 311 aa18.83■□□□□ 0.6
SEC23A-212ENST00000556092 ANKRD31Q8N7Z5 1873 aa18.83■□□□□ 0.6
SEC23A-212ENST00000556092 BTBD11A6QL63 1104 aa18.82■□□□□ 0.6
SEC23A-212ENST00000556092 KCNQ3O43525 872 aa18.82■□□□□ 0.6
SEC23A-212ENST00000556092 EIF5P55010 431 aaKnown RBP18.82■□□□□ 0.6
SEC23A-212ENST00000556092 RTF1Q92541 710 aaKnown RBP18.82■□□□□ 0.6
SEC23A-212ENST00000556092 LAMB4A4D0S4 1761 aa18.81■□□□□ 0.6
SEC23A-212ENST00000556092 MCM10Q7L590 875 aa18.81■□□□□ 0.6
SEC23A-212ENST00000556092 TEX13AQ9BXU3 409 aaPredicted RBP18.81■□□□□ 0.6
SEC23A-212ENST00000556092 CACNA1SQ13698 1873 aa18.8■□□□□ 0.6
SEC23A-212ENST00000556092 CCDC88AQ3V6T2 1871 aa18.8■□□□□ 0.6
SEC23A-212ENST00000556092 A0A087WZG4 1122 aa18.8■□□□□ 0.6
SEC23A-212ENST00000556092 SERPINB2P05120 415 aa18.8■□□□□ 0.6
SEC23A-212ENST00000556092 DALRD3Q5D0E6 543 aaKnown RBP18.8■□□□□ 0.6
SEC23A-212ENST00000556092 BICDL1Q6ZP65 573 aa18.8■□□□□ 0.6
SEC23A-212ENST00000556092 DCTN1Q14203 1278 aa18.79■□□□□ 0.6
SEC23A-212ENST00000556092 COL11A2P13942 1736 aaPredicted RBP18.79■□□□□ 0.6
SEC23A-212ENST00000556092 CARMIL3Q8ND23 1372 aa18.79■□□□□ 0.6
SEC23A-212ENST00000556092 KDM3BQ7LBC6 1761 aa18.78■□□□□ 0.6
SEC23A-212ENST00000556092 IL6STP40189 918 aaPredicted RBP18.78■□□□□ 0.6
SEC23A-212ENST00000556092 A1BGP04217 495 aa18.77■□□□□ 0.6
SEC23A-212ENST00000556092 TBC1D2BQ9UPU7 963 aa18.77■□□□□ 0.6
SEC23A-212ENST00000556092 NEFMP07197 916 aa18.76■□□□□ 0.59
SEC23A-212ENST00000556092 TBC1D9BQ66K14 1250 aa18.76■□□□□ 0.59
SEC23A-212ENST00000556092 NPM2Q86SE8 214 aaKnown RBP18.76■□□□□ 0.59
SEC23A-212ENST00000556092 PRAMEF22A3QJZ6 481 aa18.75■□□□□ 0.59
SEC23A-212ENST00000556092 C9orf131Q5VYM1 1079 aa18.75■□□□□ 0.59
SEC23A-212ENST00000556092 USP16Q9Y5T5 823 aa18.75■□□□□ 0.59
SEC23A-212ENST00000556092 KIF3CO14782 793 aa18.74■□□□□ 0.59
SEC23A-212ENST00000556092 HTATSF1O43719 755 aaKnown RBP18.74■□□□□ 0.59
SEC23A-212ENST00000556092 PIP4K2AP48426 406 aaPredicted RBP18.74■□□□□ 0.59
SEC23A-212ENST00000556092 TIAM2Q8IVF5 1701 aa18.74■□□□□ 0.59
SEC23A-212ENST00000556092 DZIP3Q86Y13 1208 aaKnown RBP18.73■□□□□ 0.59
SEC23A-212ENST00000556092 C2CD5Q86YS7 1000 aa18.73■□□□□ 0.59
SEC23A-212ENST00000556092 CAMTA2O94983 1202 aa18.72■□□□□ 0.59
SEC23A-212ENST00000556092 SNRPA1P09661 255 aaKnown RBP18.72■□□□□ 0.59
SEC23A-212ENST00000556092 RNF181Q9P0P0 153 aa18.72■□□□□ 0.59
SEC23A-212ENST00000556092 ARFGEF2Q9Y6D5 1785 aa18.72■□□□□ 0.59
SEC23A-212ENST00000556092 TNRC6CQ9HCJ0 1690 aaKnown RBP18.72■□□□□ 0.59
SEC23A-212ENST00000556092 RASSF7Q02833 373 aa18.71■□□□□ 0.59
SEC23A-212ENST00000556092 H0YIN7 160 aa18.7■□□□□ 0.58
SEC23A-212ENST00000556092 TAF7Q15545 349 aaPredicted RBP18.7■□□□□ 0.58
SEC23A-212ENST00000556092 PRR5LQ6MZQ0 368 aa18.7■□□□□ 0.58
SEC23A-212ENST00000556092 CCDC24Q8N4L8 307 aa18.7■□□□□ 0.58
SEC23A-212ENST00000556092 FER1L6Q2WGJ9 1857 aa18.69■□□□□ 0.58
SEC23A-212ENST00000556092 DICER1Q9UPY3 1922 aaKnown RBP18.69■□□□□ 0.58
SEC23A-212ENST00000556092 NPHP1O15259 732 aa18.69■□□□□ 0.58
SEC23A-212ENST00000556092 TTLL6Q8N841 843 aa18.69■□□□□ 0.58
SEC23A-212ENST00000556092 PLEKHF1Q96S99 279 aa18.69■□□□□ 0.58
SEC23A-212ENST00000556092 SETDB2Q96T68 719 aa18.69■□□□□ 0.58
SEC23A-212ENST00000556092 NMRK2Q9NPI5 230 aa18.69■□□□□ 0.58
SEC23A-212ENST00000556092 MIS18AQ9NYP9 233 aa18.69■□□□□ 0.58
SEC23A-212ENST00000556092 MAPK8IP3Q9UPT6 1336 aa18.69■□□□□ 0.58
SEC23A-212ENST00000556092 NUP98P52948 1817 aa18.68■□□□□ 0.58
SEC23A-212ENST00000556092 SLX4Q8IY92 1834 aa18.68■□□□□ 0.58
SEC23A-212ENST00000556092 NFE2L2Q16236 605 aa18.68■□□□□ 0.58
SEC23A-212ENST00000556092 CNBD1Q8NA66 436 aa18.68■□□□□ 0.58
SEC23A-212ENST00000556092 HSPA6P17066 643 aa18.67■□□□□ 0.58
SEC23A-212ENST00000556092 ZNF622Q969S3 477 aaKnown RBP eCLIP18.67■□□□□ 0.58
SEC23A-212ENST00000556092 BRIP1Q9BX63 1249 aa18.67■□□□□ 0.58
SEC23A-212ENST00000556092 NBPF26B4DH59 902 aa18.66■□□□□ 0.58
SEC23A-212ENST00000556092 PDE6BP35913 854 aa18.66■□□□□ 0.58
SEC23A-212ENST00000556092 ST5P78524 1137 aa18.66■□□□□ 0.58
SEC23A-212ENST00000556092 NBPF10Q6P3W6 841 aaKnown RBP18.66■□□□□ 0.58
SEC23A-212ENST00000556092 NBPF15Q8N660 670 aa18.66■□□□□ 0.58
SEC23A-212ENST00000556092 THUMPD2Q9BTF0 503 aaKnown RBP18.66■□□□□ 0.58
SEC23A-212ENST00000556092 PNNQ9H307 717 aaKnown RBP18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms