RNA–Protein interactions for RNA: ENST00000556017.1

CHMP4BP1-201, Transcript of charged multivesicular body protein 4B pseudogene 1, humanhuman

BASIC

Gene CHMP4BP1, Length 588 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1-201ENST00000556017 CHRNA5P30532 468 aa19.56■□□□□ 0.72
CHMP4BP1-201ENST00000556017 USPL1Q5W0Q7 1092 aa19.55■□□□□ 0.72
CHMP4BP1-201ENST00000556017 ZBTB1Q9Y2K1 713 aa19.55■□□□□ 0.72
CHMP4BP1-201ENST00000556017 C9orf131Q5VYM1 1079 aa19.54■□□□□ 0.72
CHMP4BP1-201ENST00000556017 PIM2Q9P1W9 311 aa19.54■□□□□ 0.72
CHMP4BP1-201ENST00000556017 NFIXQ14938 502 aa19.53■□□□□ 0.72
CHMP4BP1-201ENST00000556017 ANKRD31Q8N7Z5 1873 aa19.53■□□□□ 0.72
CHMP4BP1-201ENST00000556017 COL15A1P39059 1388 aa19.53■□□□□ 0.72
CHMP4BP1-201ENST00000556017 TOMM70O94826 608 aa19.52■□□□□ 0.72
CHMP4BP1-201ENST00000556017 IFFO2Q5TF58 517 aa19.52■□□□□ 0.72
CHMP4BP1-201ENST00000556017 DNAJC5GQ8N7S2 189 aa19.52■□□□□ 0.72
CHMP4BP1-201ENST00000556017 NARFQ9UHQ1 456 aa19.52■□□□□ 0.72
CHMP4BP1-201ENST00000556017 PRELPP51888 382 aa19.51■□□□□ 0.71
CHMP4BP1-201ENST00000556017 DALRD3Q5D0E6 543 aaKnown RBP19.51■□□□□ 0.71
CHMP4BP1-201ENST00000556017 CCDC88AQ3V6T2 1871 aa19.51■□□□□ 0.71
CHMP4BP1-201ENST00000556017 CARMIL3Q8ND23 1372 aa19.5■□□□□ 0.71
CHMP4BP1-201ENST00000556017 DIAPH1O60610 1272 aaKnown RBP19.5■□□□□ 0.71
CHMP4BP1-201ENST00000556017 CC2D1BQ5T0F9 858 aaKnown RBP19.5■□□□□ 0.71
CHMP4BP1-201ENST00000556017 WDR90Q96KV7 1748 aa19.5■□□□□ 0.71
CHMP4BP1-201ENST00000556017 NPC1L1Q9UHC9 1359 aa19.49■□□□□ 0.71
CHMP4BP1-201ENST00000556017 ZPR1O75312 459 aa19.49■□□□□ 0.71
CHMP4BP1-201ENST00000556017 VSIG10Q8N0Z9 540 aa19.49■□□□□ 0.71
CHMP4BP1-201ENST00000556017 IL17REQ8NFR9 667 aa19.49■□□□□ 0.71
CHMP4BP1-201ENST00000556017 SCN7AQ01118 1682 aa19.49■□□□□ 0.71
CHMP4BP1-201ENST00000556017 TNRC6CQ9HCJ0 1690 aaKnown RBP19.48■□□□□ 0.71
CHMP4BP1-201ENST00000556017 EIF5P55010 431 aaKnown RBP19.47■□□□□ 0.71
CHMP4BP1-201ENST00000556017 COL11A2P13942 1736 aaPredicted RBP19.47■□□□□ 0.71
CHMP4BP1-201ENST00000556017 ZNF496Q96IT1 587 aaPredicted RBP19.46■□□□□ 0.71
CHMP4BP1-201ENST00000556017 SERPINB2P05120 415 aa19.45■□□□□ 0.7
CHMP4BP1-201ENST00000556017 APLP1P51693 650 aa19.45■□□□□ 0.7
CHMP4BP1-201ENST00000556017 RASSF7Q02833 373 aa19.45■□□□□ 0.7
CHMP4BP1-201ENST00000556017 RNF181Q9P0P0 153 aa19.45■□□□□ 0.7
CHMP4BP1-201ENST00000556017 PCNTO95613 3336 aa19.45■□□□□ 0.7
CHMP4BP1-201ENST00000556017 CANXP27824 592 aaKnown RBP19.44■□□□□ 0.7
CHMP4BP1-201ENST00000556017 RBM46Q8TBY0 533 aaKnown RBP19.44■□□□□ 0.7
CHMP4BP1-201ENST00000556017 TIAM2Q8IVF5 1701 aa19.44■□□□□ 0.7
CHMP4BP1-201ENST00000556017 CEMIPQ8WUJ3 1361 aa19.44■□□□□ 0.7
CHMP4BP1-201ENST00000556017 HEG1Q9ULI3 1381 aa19.44■□□□□ 0.7
CHMP4BP1-201ENST00000556017 ZNF790Q6PG37 636 aa19.43■□□□□ 0.7
CHMP4BP1-201ENST00000556017 FER1L6Q2WGJ9 1857 aa19.43■□□□□ 0.7
CHMP4BP1-201ENST00000556017 BCORQ6W2J9 1755 aa19.42■□□□□ 0.7
CHMP4BP1-201ENST00000556017 HTRA3P83110 453 aa19.42■□□□□ 0.7
CHMP4BP1-201ENST00000556017 PHACTR3Q96KR7 559 aa19.42■□□□□ 0.7
CHMP4BP1-201ENST00000556017 RRAGCQ9HB90 399 aa19.41■□□□□ 0.7
CHMP4BP1-201ENST00000556017 DICER1Q9UPY3 1922 aaKnown RBP19.41■□□□□ 0.7
CHMP4BP1-201ENST00000556017 GNAT3A8MTJ3 354 aa19.4■□□□□ 0.7
CHMP4BP1-201ENST00000556017 NFKBIEO00221 500 aa19.4■□□□□ 0.7
CHMP4BP1-201ENST00000556017 KCNQ3O43525 872 aa19.4■□□□□ 0.7
CHMP4BP1-201ENST00000556017 TBC1D9BQ66K14 1250 aa19.4■□□□□ 0.7
CHMP4BP1-201ENST00000556017 U2SURPO15042 1029 aaKnown RBP19.39■□□□□ 0.69
CHMP4BP1-201ENST00000556017 STARD3NLO95772 234 aa19.38■□□□□ 0.69
CHMP4BP1-201ENST00000556017 CACNA1SQ13698 1873 aa19.38■□□□□ 0.69
CHMP4BP1-201ENST00000556017 BICDL1Q6ZP65 573 aa19.38■□□□□ 0.69
CHMP4BP1-201ENST00000556017 C2CD5Q86YS7 1000 aa19.38■□□□□ 0.69
CHMP4BP1-201ENST00000556017 SLX4Q8IY92 1834 aa19.38■□□□□ 0.69
CHMP4BP1-201ENST00000556017 TTLL6Q8N841 843 aa19.38■□□□□ 0.69
CHMP4BP1-201ENST00000556017 KDM2BQ8NHM5 1336 aa19.38■□□□□ 0.69
CHMP4BP1-201ENST00000556017 RSPH6AQ9H0K4 717 aa19.38■□□□□ 0.69
CHMP4BP1-201ENST00000556017 A1BGP04217 495 aa19.37■□□□□ 0.69
CHMP4BP1-201ENST00000556017 FSTL1Q12841 308 aa19.37■□□□□ 0.69
CHMP4BP1-201ENST00000556017 CNGB1Q14028 1251 aaPredicted RBP19.37■□□□□ 0.69
CHMP4BP1-201ENST00000556017 PRR5LQ6MZQ0 368 aa19.37■□□□□ 0.69
CHMP4BP1-201ENST00000556017 TTC5Q8N0Z6 440 aa19.37■□□□□ 0.69
CHMP4BP1-201ENST00000556017 GAS2L2Q8NHY3 880 aa19.37■□□□□ 0.69
CHMP4BP1-201ENST00000556017 TBC1D2BQ9UPU7 963 aa19.37■□□□□ 0.69
CHMP4BP1-201ENST00000556017 ARFGEF2Q9Y6D5 1785 aa19.37■□□□□ 0.69
CHMP4BP1-201ENST00000556017 ZC3H4Q9UPT8 1303 aaKnown RBP19.36■□□□□ 0.69
CHMP4BP1-201ENST00000556017 CAMTA2O94983 1202 aa19.36■□□□□ 0.69
CHMP4BP1-201ENST00000556017 LMNB1P20700 586 aa19.36■□□□□ 0.69
CHMP4BP1-201ENST00000556017 IL6STP40189 918 aaPredicted RBP19.36■□□□□ 0.69
CHMP4BP1-201ENST00000556017 TEFQ10587 303 aa19.36■□□□□ 0.69
CHMP4BP1-201ENST00000556017 CCDC24Q8N4L8 307 aa19.36■□□□□ 0.69
CHMP4BP1-201ENST00000556017 POTECB2RU33 542 aa19.35■□□□□ 0.69
CHMP4BP1-201ENST00000556017 A0A087WZG4 1122 aa19.34■□□□□ 0.69
CHMP4BP1-201ENST00000556017 PRAMEF22A3QJZ6 481 aa19.34■□□□□ 0.69
CHMP4BP1-201ENST00000556017 GLTPD2A6NH11 291 aa19.34■□□□□ 0.69
CHMP4BP1-201ENST00000556017 H0YIN7 160 aa19.34■□□□□ 0.69
CHMP4BP1-201ENST00000556017 PRKAR2BP31323 418 aa19.34■□□□□ 0.69
CHMP4BP1-201ENST00000556017 TEX13AQ9BXU3 409 aaPredicted RBP19.34■□□□□ 0.69
CHMP4BP1-201ENST00000556017 USP16Q9Y5T5 823 aa19.34■□□□□ 0.69
CHMP4BP1-201ENST00000556017 JMYQ8N9B5 988 aa19.33■□□□□ 0.68
CHMP4BP1-201ENST00000556017 KLRG1Q96E93 195 aa19.33■□□□□ 0.68
CHMP4BP1-201ENST00000556017 FMNL2Q96PY5 1086 aa19.33■□□□□ 0.68
CHMP4BP1-201ENST00000556017 BRIP1Q9BX63 1249 aa19.33■□□□□ 0.68
CHMP4BP1-201ENST00000556017 C16orf71Q8IYS4 520 aaPredicted RBP19.32■□□□□ 0.68
CHMP4BP1-201ENST00000556017 PIP4K2AP48426 406 aaPredicted RBP19.31■□□□□ 0.68
CHMP4BP1-201ENST00000556017 DLG5Q8TDM6 1919 aa19.3■□□□□ 0.68
CHMP4BP1-201ENST00000556017 BTBD11A6QL63 1104 aa19.3■□□□□ 0.68
CHMP4BP1-201ENST00000556017 ZNF330Q9Y3S2 320 aaPredicted RBP19.3■□□□□ 0.68
CHMP4BP1-201ENST00000556017 C21orf2O43822 256 aa19.29■□□□□ 0.68
CHMP4BP1-201ENST00000556017 PPP2R1AP30153 589 aa19.29■□□□□ 0.68
CHMP4BP1-201ENST00000556017 NBPF26B4DH59 902 aa19.28■□□□□ 0.68
CHMP4BP1-201ENST00000556017 VEGFAP15692 232 aaPredicted RBP19.28■□□□□ 0.68
CHMP4BP1-201ENST00000556017 PDE6BP35913 854 aa19.28■□□□□ 0.68
CHMP4BP1-201ENST00000556017 NBPF10Q6P3W6 841 aaKnown RBP19.28■□□□□ 0.68
CHMP4BP1-201ENST00000556017 MCM10Q7L590 875 aa19.28■□□□□ 0.68
CHMP4BP1-201ENST00000556017 NBPF15Q8N660 670 aa19.28■□□□□ 0.68
CHMP4BP1-201ENST00000556017 SMC1BQ8NDV3 1235 aa19.28■□□□□ 0.68
CHMP4BP1-201ENST00000556017 ZNF622Q969S3 477 aaKnown RBP eCLIP19.28■□□□□ 0.68
CHMP4BP1-201ENST00000556017 LTBP3Q9NS15 1303 aa19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms