RNA–Protein interactions for RNA: ENST00000556009.5

NPC2-208, Transcript of NPC intracellular cholesterol transporter 2, humanhuman

TSL 5

Gene NPC2, Length 699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC2-208ENST00000556009 PIM2Q9P1W9 311 aa23.87■■□□□ 1.41
NPC2-208ENST00000556009 NARFQ9UHQ1 456 aa23.87■■□□□ 1.41
NPC2-208ENST00000556009 USPL1Q5W0Q7 1092 aa23.86■■□□□ 1.41
NPC2-208ENST00000556009 DLEC1Q9Y238 1755 aa23.86■■□□□ 1.41
NPC2-208ENST00000556009 GAS2L2Q8NHY3 880 aa23.85■■□□□ 1.41
NPC2-208ENST00000556009 KIF3CO14782 793 aa23.84■■□□□ 1.41
NPC2-208ENST00000556009 U2SURPO15042 1029 aaKnown RBP23.84■■□□□ 1.41
NPC2-208ENST00000556009 IL17REQ8NFR9 667 aa23.84■■□□□ 1.41
NPC2-208ENST00000556009 GNAT3A8MTJ3 354 aa23.83■■□□□ 1.41
NPC2-208ENST00000556009 ZBTB1Q9Y2K1 713 aa23.83■■□□□ 1.41
NPC2-208ENST00000556009 DALRD3Q5D0E6 543 aaKnown RBP23.82■■□□□ 1.4
NPC2-208ENST00000556009 COL15A1P39059 1388 aa23.81■■□□□ 1.4
NPC2-208ENST00000556009 STARD3NLO95772 234 aa23.81■■□□□ 1.4
NPC2-208ENST00000556009 TTC5Q8N0Z6 440 aa23.81■■□□□ 1.4
NPC2-208ENST00000556009 HSPA6P17066 643 aa23.8■■□□□ 1.4
NPC2-208ENST00000556009 TEFQ10587 303 aa23.8■■□□□ 1.4
NPC2-208ENST00000556009 NFIXQ14938 502 aa23.8■■□□□ 1.4
NPC2-208ENST00000556009 TEX13AQ9BXU3 409 aaPredicted RBP23.8■■□□□ 1.4
NPC2-208ENST00000556009 BCL2L12Q9HB09 334 aa23.8■■□□□ 1.4
NPC2-208ENST00000556009 CCDC88AQ3V6T2 1871 aa23.79■■□□□ 1.4
NPC2-208ENST00000556009 EIF5P55010 431 aaKnown RBP23.79■■□□□ 1.4
NPC2-208ENST00000556009 CNGB1Q14028 1251 aaPredicted RBP23.79■■□□□ 1.4
NPC2-208ENST00000556009 ZNF790Q6PG37 636 aa23.79■■□□□ 1.4
NPC2-208ENST00000556009 CHRNA5P30532 468 aa23.78■■□□□ 1.4
NPC2-208ENST00000556009 ZNF496Q96IT1 587 aaPredicted RBP23.78■■□□□ 1.4
NPC2-208ENST00000556009 CFAP53Q96M91 514 aa23.78■■□□□ 1.4
NPC2-208ENST00000556009 SCN7AQ01118 1682 aa23.78■■□□□ 1.4
NPC2-208ENST00000556009 ANKRD31Q8N7Z5 1873 aa23.77■■□□□ 1.4
NPC2-208ENST00000556009 A0A087WZG4 1122 aa23.77■■□□□ 1.4
NPC2-208ENST00000556009 CANXP27824 592 aaKnown RBP23.77■■□□□ 1.4
NPC2-208ENST00000556009 C9orf131Q5VYM1 1079 aa23.76■■□□□ 1.39
NPC2-208ENST00000556009 CEMIPQ8WUJ3 1361 aa23.76■■□□□ 1.39
NPC2-208ENST00000556009 HEG1Q9ULI3 1381 aa23.76■■□□□ 1.39
NPC2-208ENST00000556009 SERPINB2P05120 415 aa23.75■■□□□ 1.39
NPC2-208ENST00000556009 PHACTR3Q96KR7 559 aa23.75■■□□□ 1.39
NPC2-208ENST00000556009 RSPH6AQ9H0K4 717 aa23.75■■□□□ 1.39
NPC2-208ENST00000556009 NUDCQ9Y266 331 aa23.74■■□□□ 1.39
NPC2-208ENST00000556009 TOMM70O94826 608 aa23.73■■□□□ 1.39
NPC2-208ENST00000556009 PRKAR2BP31323 418 aa23.73■■□□□ 1.39
NPC2-208ENST00000556009 FMNL2Q96PY5 1086 aa23.73■■□□□ 1.39
NPC2-208ENST00000556009 NMRK2Q9NPI5 230 aa23.73■■□□□ 1.39
NPC2-208ENST00000556009 COL11A2P13942 1736 aaPredicted RBP23.73■■□□□ 1.39
NPC2-208ENST00000556009 IL6STP40189 918 aaPredicted RBP23.72■■□□□ 1.39
NPC2-208ENST00000556009 TNRC6CQ9HCJ0 1690 aaKnown RBP23.72■■□□□ 1.39
NPC2-208ENST00000556009 BCORQ6W2J9 1755 aa23.72■■□□□ 1.39
NPC2-208ENST00000556009 CACNA1SQ13698 1873 aa23.71■■□□□ 1.39
NPC2-208ENST00000556009 TIAM2Q8IVF5 1701 aa23.71■■□□□ 1.39
NPC2-208ENST00000556009 PPP2R1AP30153 589 aa23.71■■□□□ 1.39
NPC2-208ENST00000556009 WDR90Q96KV7 1748 aa23.7■■□□□ 1.39
NPC2-208ENST00000556009 CARMIL3Q8ND23 1372 aa23.7■■□□□ 1.38
NPC2-208ENST00000556009 BTBD11A6QL63 1104 aa23.69■■□□□ 1.38
NPC2-208ENST00000556009 RNF181Q9P0P0 153 aa23.68■■□□□ 1.38
NPC2-208ENST00000556009 H0YIN7 160 aa23.67■■□□□ 1.38
NPC2-208ENST00000556009 U2AF1L5P0DN76 240 aaPredicted RBP23.67■■□□□ 1.38
NPC2-208ENST00000556009 U2AF1Q01081 240 aaKnown RBP eCLIP23.67■■□□□ 1.38
NPC2-208ENST00000556009 TBC1D9BQ66K14 1250 aa23.67■■□□□ 1.38
NPC2-208ENST00000556009 TTLL6Q8N841 843 aa23.67■■□□□ 1.38
NPC2-208ENST00000556009 PDZRN3Q9UPQ7 1066 aa23.67■■□□□ 1.38
NPC2-208ENST00000556009 TBC1D2BQ9UPU7 963 aa23.67■■□□□ 1.38
NPC2-208ENST00000556009 KDM2BQ8NHM5 1336 aa23.66■■□□□ 1.38
NPC2-208ENST00000556009 KCNQ3O43525 872 aa23.66■■□□□ 1.38
NPC2-208ENST00000556009 A1BGP04217 495 aa23.66■■□□□ 1.38
NPC2-208ENST00000556009 BICDL1Q6ZP65 573 aa23.66■■□□□ 1.38
NPC2-208ENST00000556009 C2CD5Q86YS7 1000 aa23.66■■□□□ 1.38
NPC2-208ENST00000556009 ZC3H4Q9UPT8 1303 aaKnown RBP23.65■■□□□ 1.38
NPC2-208ENST00000556009 HTATSF1O43719 755 aaKnown RBP23.65■■□□□ 1.38
NPC2-208ENST00000556009 APLP1P51693 650 aa23.65■■□□□ 1.38
NPC2-208ENST00000556009 RBM46Q8TBY0 533 aaKnown RBP23.65■■□□□ 1.38
NPC2-208ENST00000556009 RTF1Q92541 710 aaKnown RBP23.65■■□□□ 1.38
NPC2-208ENST00000556009 BRIP1Q9BX63 1249 aa23.65■■□□□ 1.38
NPC2-208ENST00000556009 RASSF7Q02833 373 aa23.64■■□□□ 1.37
NPC2-208ENST00000556009 NPM2Q86SE8 214 aaKnown RBP23.64■■□□□ 1.37
NPC2-208ENST00000556009 DLG5Q8TDM6 1919 aa23.64■■□□□ 1.37
NPC2-208ENST00000556009 DICER1Q9UPY3 1922 aaKnown RBP23.64■■□□□ 1.37
NPC2-208ENST00000556009 FER1L6Q2WGJ9 1857 aa23.64■■□□□ 1.37
NPC2-208ENST00000556009 PRELPP51888 382 aa23.63■■□□□ 1.37
NPC2-208ENST00000556009 ZNF330Q9Y3S2 320 aaPredicted RBP23.63■■□□□ 1.37
NPC2-208ENST00000556009 USP16Q9Y5T5 823 aa23.63■■□□□ 1.37
NPC2-208ENST00000556009 CAMTA2O94983 1202 aa23.62■■□□□ 1.37
NPC2-208ENST00000556009 PDE6BP35913 854 aa23.62■■□□□ 1.37
NPC2-208ENST00000556009 PRR5LQ6MZQ0 368 aa23.62■■□□□ 1.37
NPC2-208ENST00000556009 ARFGEF2Q9Y6D5 1785 aa23.62■■□□□ 1.37
NPC2-208ENST00000556009 SNRPA1P09661 255 aaKnown RBP23.61■■□□□ 1.37
NPC2-208ENST00000556009 LMNB1P20700 586 aa23.61■■□□□ 1.37
NPC2-208ENST00000556009 MCM10Q7L590 875 aa23.61■■□□□ 1.37
NPC2-208ENST00000556009 C16orf71Q8IYS4 520 aaPredicted RBP23.61■■□□□ 1.37
NPC2-208ENST00000556009 SETDB2Q96T68 719 aa23.61■■□□□ 1.37
NPC2-208ENST00000556009 FSTL1Q12841 308 aa23.59■■□□□ 1.37
NPC2-208ENST00000556009 CLEC4GQ6UXB4 293 aa23.59■■□□□ 1.37
NPC2-208ENST00000556009 DZIP3Q86Y13 1208 aaKnown RBP23.59■■□□□ 1.37
NPC2-208ENST00000556009 RRAGCQ9HB90 399 aa23.59■■□□□ 1.37
NPC2-208ENST00000556009 SLX4Q8IY92 1834 aa23.59■■□□□ 1.37
NPC2-208ENST00000556009 RGL2O15211 777 aa23.57■■□□□ 1.36
NPC2-208ENST00000556009 CCDC24Q8N4L8 307 aa23.57■■□□□ 1.36
NPC2-208ENST00000556009 DNAJC5GQ8N7S2 189 aa23.57■■□□□ 1.36
NPC2-208ENST00000556009 LAMB4A4D0S4 1761 aa23.57■■□□□ 1.36
NPC2-208ENST00000556009 PRAMEF22A3QJZ6 481 aa23.56■■□□□ 1.36
NPC2-208ENST00000556009 NFKBIEO00221 500 aa23.56■■□□□ 1.36
NPC2-208ENST00000556009 DCTN1Q14203 1278 aa23.56■■□□□ 1.36
NPC2-208ENST00000556009 TAF7Q15545 349 aaPredicted RBP23.56■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms