RNA–Protein interactions for RNA: ENST00000555914.5

HNRNPC-222, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), human

APPRIS ALT1 TSL 5 BASIC

Gene HNRNPC, Length 1,658 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HNRNPC-222	ENST00000555914	USP42	Q9H9J4	1324 aa	Known RBP	11.98	□□□□□ -0.49
HNRNPC-222	ENST00000555914	KCNA3	P22001	575 aa		11.97	□□□□□ -0.49
HNRNPC-222	ENST00000555914	DDR1	Q08345	913 aa		11.97	□□□□□ -0.49
HNRNPC-222	ENST00000555914	GPBP1L1	Q9HC44	474 aa	Predicted RBP	11.97	□□□□□ -0.49
HNRNPC-222	ENST00000555914	KCP	Q6ZWJ8	1503 aa		11.97	□□□□□ -0.49
HNRNPC-222	ENST00000555914	BRCA1	P38398	1863 aa	Known RBP	11.97	□□□□□ -0.49
HNRNPC-222	ENST00000555914	CCDC87	Q9NVE4	849 aa		11.97	□□□□□ -0.49
HNRNPC-222	ENST00000555914	U2SURP	O15042	1029 aa	Known RBP	11.96	□□□□□ -0.5
HNRNPC-222	ENST00000555914	CYP19A1	P11511	503 aa	Predicted RBP	11.96	□□□□□ -0.5
HNRNPC-222	ENST00000555914	USPL1	Q5W0Q7	1092 aa		11.96	□□□□□ -0.5
HNRNPC-222	ENST00000555914	ZBTB1	Q9Y2K1	713 aa		11.96	□□□□□ -0.5
HNRNPC-222	ENST00000555914	NPC1L1	Q9UHC9	1359 aa		11.95	□□□□□ -0.5
HNRNPC-222	ENST00000555914	SOS1	Q07889	1333 aa	Predicted RBP	11.95	□□□□□ -0.5
HNRNPC-222	ENST00000555914	POLRMT	O00411	1230 aa	Known RBP	11.94	□□□□□ -0.5
HNRNPC-222	ENST00000555914	TM4SF1	P30408	202 aa		11.94	□□□□□ -0.5
HNRNPC-222	ENST00000555914	IL17RE	Q8NFR9	667 aa		11.94	□□□□□ -0.5
HNRNPC-222	ENST00000555914	UBR2	Q8IWV8	1755 aa		11.94	□□□□□ -0.5
HNRNPC-222	ENST00000555914	FCHSD2	O94868	740 aa		11.94	□□□□□ -0.5
HNRNPC-222	ENST00000555914	CHRNA5	P30532	468 aa		11.94	□□□□□ -0.5
HNRNPC-222	ENST00000555914	COL15A1	P39059	1388 aa		11.93	□□□□□ -0.5
HNRNPC-222	ENST00000555914	ZPR1	O75312	459 aa		11.93	□□□□□ -0.5
HNRNPC-222	ENST00000555914	ARHGAP27	Q6ZUM4	889 aa		11.93	□□□□□ -0.5
HNRNPC-222	ENST00000555914	PHACTR3	Q96KR7	559 aa		11.93	□□□□□ -0.5
HNRNPC-222	ENST00000555914	BCL2L12	Q9HB09	334 aa		11.93	□□□□□ -0.5
HNRNPC-222	ENST00000555914	AFDN	P55196	1824 aa	Known RBP	11.92	□□□□□ -0.5
HNRNPC-222	ENST00000555914	CANX	P27824	592 aa	Known RBP	11.92	□□□□□ -0.5
HNRNPC-222	ENST00000555914	ERICH6B	Q5W0A0	696 aa		11.92	□□□□□ -0.5
HNRNPC-222	ENST00000555914	ZNF496	Q96IT1	587 aa	Predicted RBP	11.92	□□□□□ -0.5
HNRNPC-222	ENST00000555914	GNAT3	A8MTJ3	354 aa		11.91	□□□□□ -0.5
HNRNPC-222	ENST00000555914	KIF3C	O14782	793 aa		11.91	□□□□□ -0.5
HNRNPC-222	ENST00000555914	CACNB1	Q02641	598 aa	Predicted RBP	11.91	□□□□□ -0.5
HNRNPC-222	ENST00000555914	NFIX	Q14938	502 aa		11.91	□□□□□ -0.5
HNRNPC-222	ENST00000555914	VSIG10	Q8N0Z9	540 aa		11.91	□□□□□ -0.5
HNRNPC-222	ENST00000555914	PIM2	Q9P1W9	311 aa		11.91	□□□□□ -0.5
HNRNPC-222	ENST00000555914	NARF	Q9UHQ1	456 aa		11.91	□□□□□ -0.5
HNRNPC-222	ENST00000555914	ARFGEF1	Q9Y6D6	1849 aa		11.91	□□□□□ -0.5
HNRNPC-222	ENST00000555914	SIPA1L3	O60292	1781 aa	Predicted RBP	11.91	□□□□□ -0.5
HNRNPC-222	ENST00000555914	PRKAR2B	P31323	418 aa		11.91	□□□□□ -0.5
HNRNPC-222	ENST00000555914	ZNF790	Q6PG37	636 aa		11.91	□□□□□ -0.5
HNRNPC-222	ENST00000555914	TTC5	Q8N0Z6	440 aa		11.91	□□□□□ -0.5
HNRNPC-222	ENST00000555914	KCNQ3	O43525	872 aa		11.9	□□□□□ -0.5
HNRNPC-222	ENST00000555914	TEF	Q10587	303 aa		11.9	□□□□□ -0.5
HNRNPC-222	ENST00000555914	GAS2L2	Q8NHY3	880 aa		11.9	□□□□□ -0.5
HNRNPC-222	ENST00000555914	RSPH6A	Q9H0K4	717 aa		11.9	□□□□□ -0.5
HNRNPC-222	ENST00000555914	EIF5	P55010	431 aa	Known RBP	11.89	□□□□□ -0.51
HNRNPC-222	ENST00000555914	DALRD3	Q5D0E6	543 aa	Known RBP	11.89	□□□□□ -0.51
HNRNPC-222	ENST00000555914	PRKRIP1	Q9H875	184 aa	Predicted RBP	11.89	□□□□□ -0.51
HNRNPC-222	ENST00000555914	CEMIP	Q8WUJ3	1361 aa		11.89	□□□□□ -0.51
HNRNPC-222	ENST00000555914	HEG1	Q9ULI3	1381 aa		11.89	□□□□□ -0.51
HNRNPC-222	ENST00000555914	NRXN2	Q9P2S2	1712 aa		11.88	□□□□□ -0.51
HNRNPC-222	ENST00000555914	EIF5B	O60841	1220 aa	Known RBP	11.88	□□□□□ -0.51
HNRNPC-222	ENST00000555914	SERPINB2	P05120	415 aa		11.88	□□□□□ -0.51
HNRNPC-222	ENST00000555914	PPP2R1A	P30153	589 aa		11.88	□□□□□ -0.51
HNRNPC-222	ENST00000555914	C9orf131	Q5VYM1	1079 aa		11.88	□□□□□ -0.51
HNRNPC-222	ENST00000555914	BICDL1	Q6ZP65	573 aa		11.88	□□□□□ -0.51
HNRNPC-222	ENST00000555914	CARMIL3	Q8ND23	1372 aa		11.88	□□□□□ -0.51
HNRNPC-222	ENST00000555914	HNRNPU	Q00839	825 aa	Known RBP eCLIP	11.87	□□□□□ -0.51
HNRNPC-222	ENST00000555914	NMRK2	Q9NPI5	230 aa		11.87	□□□□□ -0.51
HNRNPC-222	ENST00000555914	TBC1D2B	Q9UPU7	963 aa		11.87	□□□□□ -0.51
HNRNPC-222	ENST00000555914	ZNF330	Q9Y3S2	320 aa	Predicted RBP	11.87	□□□□□ -0.51
HNRNPC-222	ENST00000555914	SBF1	O95248	1867 aa		11.87	□□□□□ -0.51
HNRNPC-222	ENST00000555914	PRAMEF22	A3QJZ6	481 aa		11.87	□□□□□ -0.51
HNRNPC-222	ENST00000555914	STARD3NL	O95772	234 aa		11.87	□□□□□ -0.51
HNRNPC-222	ENST00000555914	A1BG	P04217	495 aa		11.87	□□□□□ -0.51
HNRNPC-222	ENST00000555914	HSPA6	P17066	643 aa		11.87	□□□□□ -0.51
HNRNPC-222	ENST00000555914	PIP4K2A	P48426	406 aa	Predicted RBP	11.87	□□□□□ -0.51
HNRNPC-222	ENST00000555914	TBC1D9B	Q66K14	1250 aa		11.87	□□□□□ -0.51
HNRNPC-222	ENST00000555914	BTBD11	A6QL63	1104 aa		11.86	□□□□□ -0.51
HNRNPC-222	ENST00000555914	U2AF1L5	P0DN76	240 aa	Predicted RBP	11.86	□□□□□ -0.51
HNRNPC-222	ENST00000555914	U2AF1	Q01081	240 aa	Known RBP eCLIP	11.86	□□□□□ -0.51	6e-11	■■□□□ 14.2
HNRNPC-222	ENST00000555914	DCTN1	Q14203	1278 aa		11.86	□□□□□ -0.51
HNRNPC-222	ENST00000555914	MCM10	Q7L590	875 aa		11.86	□□□□□ -0.51
HNRNPC-222	ENST00000555914	CCDC24	Q8N4L8	307 aa		11.86	□□□□□ -0.51
HNRNPC-222	ENST00000555914	CFAP53	Q96M91	514 aa		11.86	□□□□□ -0.51
HNRNPC-222	ENST00000555914	PRELP	P51888	382 aa		11.85	□□□□□ -0.51
HNRNPC-222	ENST00000555914	RASSF7	Q02833	373 aa		11.85	□□□□□ -0.51
HNRNPC-222	ENST00000555914	FMNL2	Q96PY5	1086 aa		11.85	□□□□□ -0.51
HNRNPC-222	ENST00000555914	USP16	Q9Y5T5	823 aa		11.85	□□□□□ -0.51
HNRNPC-222	ENST00000555914	RNF181	Q9P0P0	153 aa		11.84	□□□□□ -0.51
HNRNPC-222	ENST00000555914	ANKRD31	Q8N7Z5	1873 aa		11.84	□□□□□ -0.51
HNRNPC-222	ENST00000555914	DLEC1	Q9Y238	1755 aa		11.84	□□□□□ -0.51
HNRNPC-222	ENST00000555914	SCN7A	Q01118	1682 aa		11.84	□□□□□ -0.51
HNRNPC-222	ENST00000555914	ZBED9	Q6R2W3	1325 aa		11.84	□□□□□ -0.51
HNRNPC-222	ENST00000555914	IL6ST	P40189	918 aa	Predicted RBP	11.84	□□□□□ -0.51
HNRNPC-222	ENST00000555914	TEX13A	Q9BXU3	409 aa	Predicted RBP	11.84	□□□□□ -0.51
HNRNPC-222	ENST00000555914	NUDC	Q9Y266	331 aa		11.84	□□□□□ -0.51
HNRNPC-222	ENST00000555914	TOMM70	O94826	608 aa		11.83	□□□□□ -0.52
HNRNPC-222	ENST00000555914		A0A087WZG4	1122 aa		11.82	□□□□□ -0.52
HNRNPC-222	ENST00000555914	CAMTA2	O94983	1202 aa		11.82	□□□□□ -0.52
HNRNPC-222	ENST00000555914	PRR5L	Q6MZQ0	368 aa		11.82	□□□□□ -0.52
HNRNPC-222	ENST00000555914	C2CD5	Q86YS7	1000 aa		11.82	□□□□□ -0.52
HNRNPC-222	ENST00000555914	TTLL6	Q8N841	843 aa		11.81	□□□□□ -0.52
HNRNPC-222	ENST00000555914	RTF1	Q92541	710 aa	Known RBP	11.81	□□□□□ -0.52
HNRNPC-222	ENST00000555914	MIS18A	Q9NYP9	233 aa		11.81	□□□□□ -0.52
HNRNPC-222	ENST00000555914	CCDC88A	Q3V6T2	1871 aa		11.81	□□□□□ -0.52
HNRNPC-222	ENST00000555914	COL11A2	P13942	1736 aa	Predicted RBP	11.81	□□□□□ -0.52
HNRNPC-222	ENST00000555914	FANCI	Q9NVI1	1328 aa		11.81	□□□□□ -0.52
HNRNPC-222	ENST00000555914		H0YIN7	160 aa		11.81	□□□□□ -0.52
HNRNPC-222	ENST00000555914	RRAGC	Q9HB90	399 aa		11.81	□□□□□ -0.52
HNRNPC-222	ENST00000555914	ZNF219	Q9P2Y4	722 aa	Predicted RBP	11.81	□□□□□ -0.52

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