RNA–Protein interactions for RNA: ENST00000555763.1

NEK9-207, Transcript of NIMA related kinase 9, humanhuman

TSL 3

Gene NEK9, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-207ENST00000555763 IL2RBP14784 551 aa8.49□□□□□ -1.05
NEK9-207ENST00000555763 ARHGEF25Q86VW2 580 aa8.49□□□□□ -1.05
NEK9-207ENST00000555763 RASEFQ8IZ41 740 aa8.49□□□□□ -1.05
NEK9-207ENST00000555763 SLC39A7Q92504 469 aa8.49□□□□□ -1.05
NEK9-207ENST00000555763 FCHSD2O94868 740 aa8.48□□□□□ -1.05
NEK9-207ENST00000555763 MNX1P50219 401 aaPredicted RBP8.48□□□□□ -1.05
NEK9-207ENST00000555763 MS4A3Q96HJ5 214 aa8.48□□□□□ -1.05
NEK9-207ENST00000555763 DCAF5Q96JK2 942 aa8.48□□□□□ -1.05
NEK9-207ENST00000555763 CACNA1SQ13698 1873 aa8.48□□□□□ -1.05
NEK9-207ENST00000555763 CEP290O15078 2479 aa8.48□□□□□ -1.05
NEK9-207ENST00000555763 PASKQ96RG2 1323 aa8.48□□□□□ -1.05
NEK9-207ENST00000555763 USP47Q96K76 1375 aa8.48□□□□□ -1.05
NEK9-207ENST00000555763 TRIOBPQ9H2D6 2365 aa8.47□□□□□ -1.05
NEK9-207ENST00000555763 A0A0G2JLW4 131 aa8.47□□□□□ -1.05
NEK9-207ENST00000555763 GLTPD2A6NH11 291 aa8.47□□□□□ -1.05
NEK9-207ENST00000555763 POTECB2RU33 542 aa8.47□□□□□ -1.05
NEK9-207ENST00000555763 PYGBP11216 843 aa8.47□□□□□ -1.05
NEK9-207ENST00000555763 TRAK1Q9UPV9 953 aa8.47□□□□□ -1.05
NEK9-207ENST00000555763 CCDC61Q9Y6R9 512 aa8.47□□□□□ -1.05
NEK9-207ENST00000555763 SMIM5Q71RC9 77 aa8.46□□□□□ -1.06
NEK9-207ENST00000555763 ARHGEF1Q92888 912 aaKnown RBP8.46□□□□□ -1.06
NEK9-207ENST00000555763 MCOLN1Q9GZU1 580 aa8.46□□□□□ -1.06
NEK9-207ENST00000555763 SCUBE2Q9NQ36 999 aa8.46□□□□□ -1.06
NEK9-207ENST00000555763 ZNF831Q5JPB2 1677 aa8.46□□□□□ -1.06
NEK9-207ENST00000555763 MYH14Q7Z406 1995 aaKnown RBP8.45□□□□□ -1.06
NEK9-207ENST00000555763 POTEFA5A3E0 1075 aa8.45□□□□□ -1.06
NEK9-207ENST00000555763 DPEP1P16444 411 aa8.45□□□□□ -1.06
NEK9-207ENST00000555763 KCNA3P22001 575 aa8.45□□□□□ -1.06
NEK9-207ENST00000555763 PRIM1P49642 420 aaKnown RBP8.45□□□□□ -1.06
NEK9-207ENST00000555763 NLRP6P59044 892 aa8.45□□□□□ -1.06
NEK9-207ENST00000555763 MAP2K1Q02750 393 aaPredicted RBP8.45□□□□□ -1.06
NEK9-207ENST00000555763 SYTL4Q96C24 671 aaPredicted RBP8.45□□□□□ -1.06
NEK9-207ENST00000555763 GCC1Q96CN9 775 aa8.45□□□□□ -1.06
NEK9-207ENST00000555763 RASSF10A6NK89 507 aa8.44□□□□□ -1.06
NEK9-207ENST00000555763 AKAP11Q9UKA4 1901 aa8.44□□□□□ -1.06
NEK9-207ENST00000555763 NRXN2Q9P2S2 1712 aa8.43□□□□□ -1.06
NEK9-207ENST00000555763 ARFGEF2Q9Y6D5 1785 aa8.43□□□□□ -1.06
NEK9-207ENST00000555763 UNC80Q8N2C7 3258 aa8.43□□□□□ -1.06
NEK9-207ENST00000555763 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.43□□□□□ -1.06
NEK9-207ENST00000555763 TESPA1A2RU30 521 aaPredicted RBP8.43□□□□□ -1.06
NEK9-207ENST00000555763 DLL1O00548 723 aa8.43□□□□□ -1.06
NEK9-207ENST00000555763 MMP10P09238 476 aa8.43□□□□□ -1.06
NEK9-207ENST00000555763 HMGB2P26583 209 aaKnown RBP8.43□□□□□ -1.06
NEK9-207ENST00000555763 SSFA2P28290 1259 aa8.43□□□□□ -1.06
NEK9-207ENST00000555763 CDK19Q9BWU1 502 aa8.43□□□□□ -1.06
NEK9-207ENST00000555763 PALLDQ8WX93 1383 aa8.43□□□□□ -1.06
NEK9-207ENST00000555763 RBBP6Q7Z6E9 1792 aaKnown RBP8.43□□□□□ -1.06
NEK9-207ENST00000555763 SEMA3EO15041 775 aa8.42□□□□□ -1.06
NEK9-207ENST00000555763 ATN1P54259 1190 aaPredicted RBP8.42□□□□□ -1.06
NEK9-207ENST00000555763 MMRN1Q13201 1228 aa8.42□□□□□ -1.06
NEK9-207ENST00000555763 HABP4Q5JVS0 413 aaKnown RBP8.42□□□□□ -1.06
NEK9-207ENST00000555763 KCNH5Q8NCM2 988 aa8.42□□□□□ -1.06
NEK9-207ENST00000555763 AK7Q96M32 723 aa8.42□□□□□ -1.06
NEK9-207ENST00000555763 BRCA2P51587 3418 aa8.42□□□□□ -1.06
NEK9-207ENST00000555763 SCN11AQ9UI33 1791 aa8.41□□□□□ -1.06
NEK9-207ENST00000555763 WDR33Q9C0J8 1336 aaKnown RBP8.41□□□□□ -1.06
NEK9-207ENST00000555763 TMEM88BA6NKF7 163 aa8.41□□□□□ -1.06
NEK9-207ENST00000555763 PHF14O94880 888 aa8.41□□□□□ -1.06
NEK9-207ENST00000555763 RASSF7Q02833 373 aa8.41□□□□□ -1.06
NEK9-207ENST00000555763 RANBP2P49792 3224 aaKnown RBP8.41□□□□□ -1.06
NEK9-207ENST00000555763 MEGF6O75095 1541 aa8.4□□□□□ -1.06
NEK9-207ENST00000555763 ZMYND10O75800 440 aa8.4□□□□□ -1.06
NEK9-207ENST00000555763 SOX10P56693 466 aa8.4□□□□□ -1.06
NEK9-207ENST00000555763 DALRD3Q5D0E6 543 aaKnown RBP8.4□□□□□ -1.06
NEK9-207ENST00000555763 DDX54Q8TDD1 881 aaKnown RBP8.4□□□□□ -1.06
NEK9-207ENST00000555763 NLRP2Q9NX02 1062 aa8.4□□□□□ -1.06
NEK9-207ENST00000555763 PIM2Q9P1W9 311 aa8.4□□□□□ -1.06
NEK9-207ENST00000555763 CENPFP49454 3210 aa8.39□□□□□ -1.07
NEK9-207ENST00000555763 ANKRD31Q8N7Z5 1873 aa8.39□□□□□ -1.07
NEK9-207ENST00000555763 LMNB1P20700 586 aa8.39□□□□□ -1.07
NEK9-207ENST00000555763 FXR1P51114 621 aaKnown RBP eCLIP8.39□□□□□ -1.07
NEK9-207ENST00000555763 E2F4Q16254 413 aa8.39□□□□□ -1.07
NEK9-207ENST00000555763 CCDC87Q9NVE4 849 aa8.39□□□□□ -1.07
NEK9-207ENST00000555763 COL11A2P13942 1736 aaPredicted RBP8.39□□□□□ -1.07
NEK9-207ENST00000555763 PITPNM2Q9BZ72 1349 aa8.38□□□□□ -1.07
NEK9-207ENST00000555763 ITGAEP38570 1179 aa8.38□□□□□ -1.07
NEK9-207ENST00000555763 DGKZQ13574 1117 aa8.38□□□□□ -1.07
NEK9-207ENST00000555763 SPNS2Q8IVW8 549 aa8.38□□□□□ -1.07
NEK9-207ENST00000555763 ITGBL1O95965 494 aaPredicted RBP8.37□□□□□ -1.07
NEK9-207ENST00000555763 DEFB115Q30KQ5 88 aa8.37□□□□□ -1.07
NEK9-207ENST00000555763 TSKSQ9UJT2 592 aa8.37□□□□□ -1.07
NEK9-207ENST00000555763 VCANP13611 3396 aa8.37□□□□□ -1.07
NEK9-207ENST00000555763 SOX12O15370 315 aa8.36□□□□□ -1.07
NEK9-207ENST00000555763 LDHDQ86WU2 507 aa8.36□□□□□ -1.07
NEK9-207ENST00000555763 BEGAINQ9BUH8 593 aa8.36□□□□□ -1.07
NEK9-207ENST00000555763 MFRPQ9BY79 579 aa8.36□□□□□ -1.07
NEK9-207ENST00000555763 HTTP42858 3142 aa8.36□□□□□ -1.07
NEK9-207ENST00000555763 ANKRD24Q8TF21 1146 aa8.35□□□□□ -1.07
NEK9-207ENST00000555763 KIAA0100Q14667 2235 aaKnown RBP8.35□□□□□ -1.07
NEK9-207ENST00000555763 BCORQ6W2J9 1755 aa8.35□□□□□ -1.07
NEK9-207ENST00000555763 ZNF467Q7Z7K2 595 aaPredicted RBP8.34□□□□□ -1.07
NEK9-207ENST00000555763 LINC00116Q8NCU8 138 aa8.34□□□□□ -1.07
NEK9-207ENST00000555763 ZMYND15Q9H091 742 aa8.34□□□□□ -1.07
NEK9-207ENST00000555763 LAMA3Q16787 3333 aa8.34□□□□□ -1.07
NEK9-207ENST00000555763 TTC21BQ7Z4L5 1316 aa8.33□□□□□ -1.08
NEK9-207ENST00000555763 TTC21AQ8NDW8 1320 aa8.33□□□□□ -1.08
NEK9-207ENST00000555763 LAMB4A4D0S4 1761 aa8.33□□□□□ -1.08
NEK9-207ENST00000555763 NFKBIEO00221 500 aa8.33□□□□□ -1.08
NEK9-207ENST00000555763 GNPATO15228 680 aa8.33□□□□□ -1.08
NEK9-207ENST00000555763 CA12O43570 354 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 168.6 ms