RNA–Protein interactions for RNA: ENST00000555752.1

SUPT16H-203, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2

Gene SUPT16H, Length 888 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-203ENST00000555752 LGR6Q9HBX8 967 aa26.02■■□□□ 1.76
SUPT16H-203ENST00000555752 CYP19A1P11511 503 aaPredicted RBP26.01■■□□□ 1.75
SUPT16H-203ENST00000555752 SLC39A6Q13433 755 aa26.01■■□□□ 1.75
SUPT16H-203ENST00000555752 NRXN2Q9P2S2 1712 aa26.01■■□□□ 1.75
SUPT16H-203ENST00000555752 DLEC1Q9Y238 1755 aa26.01■■□□□ 1.75
SUPT16H-203ENST00000555752 BCL2L12Q9HB09 334 aa26■■□□□ 1.75
SUPT16H-203ENST00000555752 CCDC88AQ3V6T2 1871 aa26■■□□□ 1.75
SUPT16H-203ENST00000555752 TIAM2Q8IVF5 1701 aa26■■□□□ 1.75
SUPT16H-203ENST00000555752 GLTPD2A6NH11 291 aa25.99■■□□□ 1.75
SUPT16H-203ENST00000555752 LMNB1P20700 586 aa25.99■■□□□ 1.75
SUPT16H-203ENST00000555752 MORC1Q86VD1 984 aa25.99■■□□□ 1.75
SUPT16H-203ENST00000555752 SLC52A2Q9HAB3 445 aa25.99■■□□□ 1.75
SUPT16H-203ENST00000555752 NARFQ9UHQ1 456 aa25.99■■□□□ 1.75
SUPT16H-203ENST00000555752 COL15A1P39059 1388 aa25.98■■□□□ 1.75
SUPT16H-203ENST00000555752 CARMIL3Q8ND23 1372 aa25.98■■□□□ 1.75
SUPT16H-203ENST00000555752 ZC3H4Q9UPT8 1303 aaKnown RBP25.98■■□□□ 1.75
SUPT16H-203ENST00000555752 VEGFAP15692 232 aaPredicted RBP25.98■■□□□ 1.75
SUPT16H-203ENST00000555752 IL13P35225 146 aa25.98■■□□□ 1.75
SUPT16H-203ENST00000555752 ZBTB1Q9Y2K1 713 aa25.98■■□□□ 1.75
SUPT16H-203ENST00000555752 SERPINB2P05120 415 aa25.97■■□□□ 1.75
SUPT16H-203ENST00000555752 AKAP4Q5JQC9 854 aa25.97■■□□□ 1.75
SUPT16H-203ENST00000555752 HSPA1AP0DMV8 641 aaKnown RBP25.96■■□□□ 1.75
SUPT16H-203ENST00000555752 HSPA1BP0DMV9 641 aaKnown RBP25.96■■□□□ 1.75
SUPT16H-203ENST00000555752 C2CD5Q86YS7 1000 aa25.96■■□□□ 1.75
SUPT16H-203ENST00000555752 VIRMAQ69YN4 1812 aaKnown RBP25.95■■□□□ 1.75
SUPT16H-203ENST00000555752 NFKBIEO00221 500 aa25.95■■□□□ 1.74
SUPT16H-203ENST00000555752 TTLL6Q8N841 843 aa25.95■■□□□ 1.74
SUPT16H-203ENST00000555752 MRC1P22897 1456 aa25.94■■□□□ 1.74
SUPT16H-203ENST00000555752 POTECB2RU33 542 aa25.94■■□□□ 1.74
SUPT16H-203ENST00000555752 RNMTO43148 476 aaKnown RBP25.93■■□□□ 1.74
SUPT16H-203ENST00000555752 BICDL1Q6ZP65 573 aa25.92■■□□□ 1.74
SUPT16H-203ENST00000555752 HSPA5P11021 654 aaKnown RBP25.91■■□□□ 1.74
SUPT16H-203ENST00000555752 CANXP27824 592 aaKnown RBP25.91■■□□□ 1.74
SUPT16H-203ENST00000555752 H0YIN7 160 aa25.9■■□□□ 1.74
SUPT16H-203ENST00000555752 HMOX1P09601 288 aa25.9■■□□□ 1.74
SUPT16H-203ENST00000555752 ZNF219Q9P2Y4 722 aaPredicted RBP25.9■■□□□ 1.74
SUPT16H-203ENST00000555752 ANKRD31Q8N7Z5 1873 aa25.89■■□□□ 1.74
SUPT16H-203ENST00000555752 CCDC24Q8N4L8 307 aa25.88■■□□□ 1.73
SUPT16H-203ENST00000555752 TIMELESSQ9UNS1 1208 aa25.88■■□□□ 1.73
SUPT16H-203ENST00000555752 COL11A2P13942 1736 aaPredicted RBP25.86■■□□□ 1.73
SUPT16H-203ENST00000555752 MTHFSDQ2M296 383 aaKnown RBP25.86■■□□□ 1.73
SUPT16H-203ENST00000555752 ZNF622Q969S3 477 aaKnown RBP eCLIP25.86■■□□□ 1.736e-9■□□□□ 8.8
SUPT16H-203ENST00000555752 UBR2Q8IWV8 1755 aa25.86■■□□□ 1.73
SUPT16H-203ENST00000555752 C21orf2O43822 256 aa25.85■■□□□ 1.73
SUPT16H-203ENST00000555752 EIF4G2P78344 907 aaKnown RBP eCLIP25.85■■□□□ 1.73
SUPT16H-203ENST00000555752 TBC1D9BQ66K14 1250 aa25.85■■□□□ 1.73
SUPT16H-203ENST00000555752 EIF5P55010 431 aaKnown RBP25.84■■□□□ 1.73
SUPT16H-203ENST00000555752 VSIG10Q8N0Z9 540 aa25.84■■□□□ 1.73
SUPT16H-203ENST00000555752 ERFEQ4G0M1 354 aa25.83■■□□□ 1.73
SUPT16H-203ENST00000555752 FER1L6Q2WGJ9 1857 aa25.83■■□□□ 1.72
SUPT16H-203ENST00000555752 DICER1Q9UPY3 1922 aaKnown RBP25.82■■□□□ 1.72
SUPT16H-203ENST00000555752 POTEIP0CG38 1075 aa25.82■■□□□ 1.72
SUPT16H-203ENST00000555752 POTEJP0CG39 1038 aa25.82■■□□□ 1.72
SUPT16H-203ENST00000555752 DPY19L2Q6NUT2 758 aa25.82■■□□□ 1.72
SUPT16H-203ENST00000555752 KNSTRNQ9Y448 316 aa25.82■■□□□ 1.72
SUPT16H-203ENST00000555752 TRIM26Q12899 539 aaPredicted RBP25.81■■□□□ 1.72
SUPT16H-203ENST00000555752 MKRN1Q9UHC7 482 aaKnown RBP25.81■■□□□ 1.72
SUPT16H-203ENST00000555752 PRR5LQ6MZQ0 368 aa25.8■■□□□ 1.72
SUPT16H-203ENST00000555752 TBC1D2BQ9UPU7 963 aa25.8■■□□□ 1.72
SUPT16H-203ENST00000555752 ZNF330Q9Y3S2 320 aaPredicted RBP25.8■■□□□ 1.72
SUPT16H-203ENST00000555752 SCN7AQ01118 1682 aa25.8■■□□□ 1.72
SUPT16H-203ENST00000555752 AMER1Q5JTC6 1135 aaPredicted RBP25.79■■□□□ 1.72
SUPT16H-203ENST00000555752 BRIP1Q9BX63 1249 aa25.79■■□□□ 1.72
SUPT16H-203ENST00000555752 DDNO94850 711 aaPredicted RBP25.78■■□□□ 1.72
SUPT16H-203ENST00000555752 CACNA1SQ13698 1873 aa25.78■■□□□ 1.72
SUPT16H-203ENST00000555752 STARD3NLO95772 234 aa25.77■■□□□ 1.72
SUPT16H-203ENST00000555752 CHADLQ6NUI6 762 aa25.77■■□□□ 1.72
SUPT16H-203ENST00000555752 ZNF496Q96IT1 587 aaPredicted RBP25.77■■□□□ 1.72
SUPT16H-203ENST00000555752 SLX4Q8IY92 1834 aa25.77■■□□□ 1.72
SUPT16H-203ENST00000555752 A0A087WZG4 1122 aa25.76■■□□□ 1.71
SUPT16H-203ENST00000555752 PDE6BP35913 854 aa25.76■■□□□ 1.71
SUPT16H-203ENST00000555752 TTC5Q8N0Z6 440 aa25.76■■□□□ 1.71
SUPT16H-203ENST00000555752 CREBZFQ9NS37 354 aa25.76■■□□□ 1.71
SUPT16H-203ENST00000555752 TAOK3Q9H2K8 898 aa25.75■■□□□ 1.71
SUPT16H-203ENST00000555752 HEG1Q9ULI3 1381 aa25.73■■□□□ 1.71
SUPT16H-203ENST00000555752 LTBP3Q9NS15 1303 aa25.72■■□□□ 1.71
SUPT16H-203ENST00000555752 A1BGP04217 495 aa25.72■■□□□ 1.71
SUPT16H-203ENST00000555752 IL17REQ8NFR9 667 aa25.72■■□□□ 1.71
SUPT16H-203ENST00000555752 PCGF6Q9BYE7 350 aa25.72■■□□□ 1.71
SUPT16H-203ENST00000555752 FOXN1O15353 648 aa25.71■■□□□ 1.71
SUPT16H-203ENST00000555752 DIAPH1O60610 1272 aaKnown RBP25.71■■□□□ 1.71
SUPT16H-203ENST00000555752 PRPF40BQ6NWY9 871 aaKnown RBP25.71■■□□□ 1.71
SUPT16H-203ENST00000555752 ZNF790Q6PG37 636 aa25.71■■□□□ 1.71
SUPT16H-203ENST00000555752 PDZRN3Q9UPQ7 1066 aa25.71■■□□□ 1.71
SUPT16H-203ENST00000555752 SIPA1L3O60292 1781 aaPredicted RBP25.7■■□□□ 1.7
SUPT16H-203ENST00000555752 CAMTA2O94983 1202 aa25.7■■□□□ 1.7
SUPT16H-203ENST00000555752 CNBD1Q8NA66 436 aa25.7■■□□□ 1.7
SUPT16H-203ENST00000555752 SRGNP10124 158 aa25.69■■□□□ 1.7
SUPT16H-203ENST00000555752 IL6STP40189 918 aaPredicted RBP25.69■■□□□ 1.7
SUPT16H-203ENST00000555752 SETDB2Q96T68 719 aa25.69■■□□□ 1.7
SUPT16H-203ENST00000555752 CNTNAP1P78357 1384 aa25.69■■□□□ 1.7
SUPT16H-203ENST00000555752 NPHP1O15259 732 aa25.68■■□□□ 1.7
SUPT16H-203ENST00000555752 TEFQ10587 303 aa25.68■■□□□ 1.7
SUPT16H-203ENST00000555752 STYK1Q6J9G0 422 aa25.68■■□□□ 1.7
SUPT16H-203ENST00000555752 CNKSR1Q969H4 720 aa25.68■■□□□ 1.7
SUPT16H-203ENST00000555752 ARFGEF2Q9Y6D5 1785 aa25.68■■□□□ 1.7
SUPT16H-203ENST00000555752 PASKQ96RG2 1323 aa25.67■■□□□ 1.7
SUPT16H-203ENST00000555752 KCNQ3O43525 872 aa25.67■■□□□ 1.7
SUPT16H-203ENST00000555752 PIP4K2AP48426 406 aaPredicted RBP25.67■■□□□ 1.7
SUPT16H-203ENST00000555752 CC2D1BQ5T0F9 858 aaKnown RBP25.66■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms