RNA–Protein interactions for RNA: ENST00000555740.5

PCNX4-210, Transcript of pecanex 4, humanhuman

TSL 2

Gene PCNX4, Length 2,545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-210ENST00000555740 AFF2P51816 1311 aa10.13□□□□□ -0.79
PCNX4-210ENST00000555740 SBF2Q86WG5 1849 aa10.13□□□□□ -0.79
PCNX4-210ENST00000555740 RNF123Q5XPI4 1314 aa10.13□□□□□ -0.79
PCNX4-210ENST00000555740 CYP27B1O15528 508 aa10.12□□□□□ -0.79
PCNX4-210ENST00000555740 MFSD10Q14728 455 aa10.12□□□□□ -0.79
PCNX4-210ENST00000555740 C1orf141Q5JVX7 400 aa10.12□□□□□ -0.79
PCNX4-210ENST00000555740 HOMEZQ8IX15 550 aa10.12□□□□□ -0.79
PCNX4-210ENST00000555740 IFNL2Q8IZJ0 200 aa10.12□□□□□ -0.79
PCNX4-210ENST00000555740 ZCRB1Q8TBF4 217 aaKnown RBP10.12□□□□□ -0.79
PCNX4-210ENST00000555740 NGLY1Q96IV0 654 aa10.12□□□□□ -0.79
PCNX4-210ENST00000555740 BRWD3Q6RI45 1802 aa10.12□□□□□ -0.79
PCNX4-210ENST00000555740 CHL1O00533 1208 aa10.12□□□□□ -0.79
PCNX4-210ENST00000555740 RNMTO43148 476 aaKnown RBP10.12□□□□□ -0.79
PCNX4-210ENST00000555740 IL17REQ8NFR9 667 aa10.12□□□□□ -0.79
PCNX4-210ENST00000555740 RTF1Q92541 710 aaKnown RBP10.12□□□□□ -0.79
PCNX4-210ENST00000555740 SALL2Q9Y467 1007 aaPredicted RBP10.12□□□□□ -0.79
PCNX4-210ENST00000555740 SOS1Q07889 1333 aaPredicted RBP10.12□□□□□ -0.79
PCNX4-210ENST00000555740 KCPQ6ZWJ8 1503 aa10.12□□□□□ -0.79
PCNX4-210ENST00000555740 FXR2P51116 673 aaKnown RBP eCLIP10.11□□□□□ -0.79
PCNX4-210ENST00000555740 MEX3CQ5U5Q3 659 aaKnown RBP10.11□□□□□ -0.79
PCNX4-210ENST00000555740 USP21Q9UK80 565 aa10.11□□□□□ -0.79
PCNX4-210ENST00000555740 SENP3-EIF4A1A0A087X0R7 540 aa10.11□□□□□ -0.79
PCNX4-210ENST00000555740 MCM10Q7L590 875 aa10.11□□□□□ -0.79
PCNX4-210ENST00000555740 DCAF5Q96JK2 942 aa10.11□□□□□ -0.79
PCNX4-210ENST00000555740 THUMPD2Q9BTF0 503 aaKnown RBP10.11□□□□□ -0.79
PCNX4-210ENST00000555740 DAXXQ9UER7 740 aaPredicted RBP10.11□□□□□ -0.79
PCNX4-210ENST00000555740 RREB1Q92766 1687 aa10.1□□□□□ -0.79
PCNX4-210ENST00000555740 HEG1Q9ULI3 1381 aa10.1□□□□□ -0.79
PCNX4-210ENST00000555740 ONECUT3O60422 494 aaPredicted RBP10.1□□□□□ -0.79
PCNX4-210ENST00000555740 PDE4AP27815 886 aa10.1□□□□□ -0.79
PCNX4-210ENST00000555740 TRPC5Q9UL62 973 aaPredicted RBP10.1□□□□□ -0.79
PCNX4-210ENST00000555740 DPYSL4O14531 572 aa10.09□□□□□ -0.79
PCNX4-210ENST00000555740 DCTN1Q14203 1278 aa10.09□□□□□ -0.79
PCNX4-210ENST00000555740 MBIPQ9NS73 344 aa10.09□□□□□ -0.79
PCNX4-210ENST00000555740 EMILIN3Q9NT22 766 aa10.09□□□□□ -0.79
PCNX4-210ENST00000555740 TJP1Q07157 1748 aa10.09□□□□□ -0.79
PCNX4-210ENST00000555740 ZNF428Q96B54 188 aa10.09□□□□□ -0.79
PCNX4-210ENST00000555740 ERVV-2B6SEH9 535 aa10.08□□□□□ -0.8
PCNX4-210ENST00000555740 TMEM106CQ9BVX2 250 aa10.08□□□□□ -0.8
PCNX4-210ENST00000555740 RGPD3A6NKT7 1758 aaPredicted RBP10.08□□□□□ -0.8
PCNX4-210ENST00000555740 RGPD4Q7Z3J3 1758 aa10.08□□□□□ -0.8
PCNX4-210ENST00000555740 CAMK2BQ13554 666 aa10.08□□□□□ -0.8
PCNX4-210ENST00000555740 TAF7Q15545 349 aaPredicted RBP10.08□□□□□ -0.8
PCNX4-210ENST00000555740 ERICH6Q7L0X2 663 aa10.08□□□□□ -0.8
PCNX4-210ENST00000555740 SLC52A2Q9HAB3 445 aa10.08□□□□□ -0.8
PCNX4-210ENST00000555740 BTAF1O14981 1849 aa10.08□□□□□ -0.8
PCNX4-210ENST00000555740 GPIHBP1Q8IV16 184 aa10.07□□□□□ -0.8
PCNX4-210ENST00000555740 TSR2Q969E8 191 aaKnown RBP10.07□□□□□ -0.8
PCNX4-210ENST00000555740 GJD4Q96KN9 370 aaPredicted RBP10.07□□□□□ -0.8
PCNX4-210ENST00000555740 LGR6Q9HBX8 967 aa10.07□□□□□ -0.8
PCNX4-210ENST00000555740 LY75O60449 1722 aa10.07□□□□□ -0.8
PCNX4-210ENST00000555740 COL5A3P25940 1745 aaPredicted RBP10.07□□□□□ -0.8
PCNX4-210ENST00000555740 HOXB7P09629 217 aa10.07□□□□□ -0.8
PCNX4-210ENST00000555740 ZNF772Q68DY9 489 aaPredicted RBP10.07□□□□□ -0.8
PCNX4-210ENST00000555740 DPY19L2Q6NUT2 758 aa10.07□□□□□ -0.8
PCNX4-210ENST00000555740 MPRIPQ6WCQ1 1025 aa10.07□□□□□ -0.8
PCNX4-210ENST00000555740 PIP4P2Q8N4L2 257 aa10.07□□□□□ -0.8
PCNX4-210ENST00000555740 RCAN3Q9UKA8 241 aa10.07□□□□□ -0.8
PCNX4-210ENST00000555740 KDM4CQ9H3R0 1056 aa10.06□□□□□ -0.8
PCNX4-210ENST00000555740 DDB1Q16531 1140 aa10.06□□□□□ -0.8
PCNX4-210ENST00000555740 EXOC5O00471 708 aa10.05□□□□□ -0.8
PCNX4-210ENST00000555740 EXOSC9Q06265 439 aaKnown RBP10.05□□□□□ -0.8
PCNX4-210ENST00000555740 TEFQ10587 303 aa10.05□□□□□ -0.8
PCNX4-210ENST00000555740 TSPYL4Q9UJ04 414 aa10.05□□□□□ -0.8
PCNX4-210ENST00000555740 ALDH1L2Q3SY69 923 aa10.05□□□□□ -0.8
PCNX4-210ENST00000555740 USP35Q9P2H5 1018 aa10.05□□□□□ -0.8
PCNX4-210ENST00000555740 KRI1Q8N9T8 703 aaKnown RBP10.04□□□□□ -0.8
PCNX4-210ENST00000555740 TNS1Q9HBL0 1735 aaKnown RBP10.04□□□□□ -0.8
PCNX4-210ENST00000555740 RARSP54136 660 aaKnown RBP10.04□□□□□ -0.8
PCNX4-210ENST00000555740 FAM98CQ17RN3 349 aaKnown RBP10.04□□□□□ -0.8
PCNX4-210ENST00000555740 MS4A3Q96HJ5 214 aa10.04□□□□□ -0.8
PCNX4-210ENST00000555740 EIF4A1P60842 406 aaKnown RBP10.03□□□□□ -0.8
PCNX4-210ENST00000555740 MARCH10Q8NA82 808 aaPredicted RBP10.03□□□□□ -0.8
PCNX4-210ENST00000555740 CCDC9Q9Y3X0 531 aaKnown RBP10.03□□□□□ -0.8
PCNX4-210ENST00000555740 RGS12O14924 1447 aa10.03□□□□□ -0.8
PCNX4-210ENST00000555740 VAMP4O75379 141 aa10.03□□□□□ -0.8
PCNX4-210ENST00000555740 CD44P16070 742 aaKnown RBP10.03□□□□□ -0.8
PCNX4-210ENST00000555740 PPP1R15BQ5SWA1 713 aa10.03□□□□□ -0.8
PCNX4-210ENST00000555740 NUP188Q5SRE5 1749 aa10.02□□□□□ -0.8
PCNX4-210ENST00000555740 BTBD11A6QL63 1104 aa10.02□□□□□ -0.8
PCNX4-210ENST00000555740 RRP1P56182 461 aaKnown RBP10.02□□□□□ -0.8
PCNX4-210ENST00000555740 C8orf58Q8NAV2 365 aa10.02□□□□□ -0.8
PCNX4-210ENST00000555740 PXDNLA1KZ92 1463 aa10.02□□□□□ -0.81
PCNX4-210ENST00000555740 CABP4P57796 275 aa10.02□□□□□ -0.81
PCNX4-210ENST00000555740 RBM6P78332 1123 aaKnown RBP10.02□□□□□ -0.81
PCNX4-210ENST00000555740 DSG2Q14126 1118 aa10.02□□□□□ -0.81
PCNX4-210ENST00000555740 TWISTNBQ3B726 338 aaPredicted RBP10.02□□□□□ -0.81
PCNX4-210ENST00000555740 QTRT2Q9H974 415 aaKnown RBP10.02□□□□□ -0.81
PCNX4-210ENST00000555740 LAS1LQ9Y4W2 734 aaKnown RBP10.02□□□□□ -0.81
PCNX4-210ENST00000555740 TAF1LQ8IZX4 1826 aa10.02□□□□□ -0.81
PCNX4-210ENST00000555740 ZNF790Q6PG37 636 aa10.01□□□□□ -0.81
PCNX4-210ENST00000555740 DDX54Q8TDD1 881 aaKnown RBP10.01□□□□□ -0.81
PCNX4-210ENST00000555740 AK7Q96M32 723 aa10.01□□□□□ -0.81
PCNX4-210ENST00000555740 FAM117AQ9C073 453 aa10.01□□□□□ -0.81
PCNX4-210ENST00000555740 KIF16BQ96L93 1317 aa10.01□□□□□ -0.81
PCNX4-210ENST00000555740 TSPYL6Q8N831 410 aa10.01□□□□□ -0.81
PCNX4-210ENST00000555740 CHMP4AQ9BY43 222 aa10.01□□□□□ -0.81
PCNX4-210ENST00000555740 TRIM66O15016 1216 aa10□□□□□ -0.81
PCNX4-210ENST00000555740 SMYD5Q6GMV2 418 aa10□□□□□ -0.81
PCNX4-210ENST00000555740 ARIH1Q9Y4X5 557 aaPredicted RBP10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms