RNA–Protein interactions for RNA: ENST00000555497.5

TMEM260-207, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 2,218 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-207ENST00000555497 POLA2Q14181 598 aa29.96■■■□□ 2.39
TMEM260-207ENST00000555497 STRCQ7RTU9 1775 aa29.96■■■□□ 2.39
TMEM260-207ENST00000555497 USP26Q9BXU7 913 aa29.96■■■□□ 2.39
TMEM260-207ENST00000555497 SLC52A2Q9HAB3 445 aa29.96■■■□□ 2.39
TMEM260-207ENST00000555497 SPG7Q9UQ90 795 aa29.96■■■□□ 2.39
TMEM260-207ENST00000555497 TUBGCP6Q96RT7 1819 aa29.95■■■□□ 2.39
TMEM260-207ENST00000555497 MAP3K2Q9Y2U5 619 aa29.95■■■□□ 2.38
TMEM260-207ENST00000555497 ZNF790Q6PG37 636 aa29.94■■■□□ 2.38
TMEM260-207ENST00000555497 NFATC2IPQ8NCF5 419 aa29.94■■■□□ 2.38
TMEM260-207ENST00000555497 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP29.94■■■□□ 2.382e-7■■■■■ 28.3
TMEM260-207ENST00000555497 CPDO75976 1380 aa29.93■■■□□ 2.38
TMEM260-207ENST00000555497 MX1P20591 662 aa29.92■■■□□ 2.38
TMEM260-207ENST00000555497 PDIA6Q15084 440 aa29.92■■■□□ 2.38
TMEM260-207ENST00000555497 ABCC6O95255 1503 aa29.92■■■□□ 2.38
TMEM260-207ENST00000555497 CYP27B1O15528 508 aa29.92■■■□□ 2.38
TMEM260-207ENST00000555497 KSR2Q6VAB6 950 aa29.92■■■□□ 2.38
TMEM260-207ENST00000555497 IFNL2Q8IZJ0 200 aa29.91■■■□□ 2.38
TMEM260-207ENST00000555497 C5P01031 1676 aa29.91■■■□□ 2.38
TMEM260-207ENST00000555497 IL1RAPL2Q9NP60 686 aa29.91■■■□□ 2.38
TMEM260-207ENST00000555497 SRGAP3O43295 1099 aa29.9■■■□□ 2.38
TMEM260-207ENST00000555497 HYPKQ9NX55 129 aa29.9■■■□□ 2.38
TMEM260-207ENST00000555497 SURF6O75683 361 aaKnown RBP29.9■■■□□ 2.38
TMEM260-207ENST00000555497 CHMP5Q9NZZ3 219 aa29.9■■■□□ 2.38
TMEM260-207ENST00000555497 STAP2Q9UGK3 403 aa29.9■■■□□ 2.38
TMEM260-207ENST00000555497 KDM4FA0A1W2PPD8 638 aa29.89■■■□□ 2.38
TMEM260-207ENST00000555497 DDIT3P35638 169 aa29.89■■■□□ 2.38
TMEM260-207ENST00000555497 CASC1Q6TDU7 716 aa29.89■■■□□ 2.38
TMEM260-207ENST00000555497 DDX21Q9NR30 783 aaKnown RBP eCLIP29.89■■■□□ 2.38
TMEM260-207ENST00000555497 EIF5BO60841 1220 aaKnown RBP29.88■■■□□ 2.37
TMEM260-207ENST00000555497 ZNF335Q9H4Z2 1342 aaPredicted RBP29.88■■■□□ 2.37
TMEM260-207ENST00000555497 PKD1L3Q7Z443 1732 aa29.87■■■□□ 2.37
TMEM260-207ENST00000555497 GSE1Q14687 1217 aa29.87■■■□□ 2.37
TMEM260-207ENST00000555497 CWF19L2Q2TBE0 894 aaKnown RBP29.87■■■□□ 2.37
TMEM260-207ENST00000555497 ALDH1L1O75891 902 aa29.86■■■□□ 2.37
TMEM260-207ENST00000555497 RAB11FIP3O75154 756 aa29.86■■■□□ 2.37
TMEM260-207ENST00000555497 AIMP1Q12904 312 aaKnown RBP29.86■■■□□ 2.37
TMEM260-207ENST00000555497 ZNF496Q96IT1 587 aaPredicted RBP29.86■■■□□ 2.37
TMEM260-207ENST00000555497 HSP90AB1P08238 724 aaKnown RBP29.85■■■□□ 2.37
TMEM260-207ENST00000555497 RHPN1Q8TCX5 695 aa29.85■■■□□ 2.37
TMEM260-207ENST00000555497 DCAF5Q96JK2 942 aa29.85■■■□□ 2.37
TMEM260-207ENST00000555497 SLAIN2Q9P270 581 aa29.85■■■□□ 2.37
TMEM260-207ENST00000555497 NUTM1Q86Y26 1132 aa29.84■■■□□ 2.37
TMEM260-207ENST00000555497 ERC2O15083 957 aa29.84■■■□□ 2.37
TMEM260-207ENST00000555497 MRC1P22897 1456 aa29.83■■■□□ 2.37
TMEM260-207ENST00000555497 K7ELQ4 463 aaPredicted RBP29.83■■■□□ 2.37
TMEM260-207ENST00000555497 UNC5CLQ8IV45 518 aa29.83■■■□□ 2.37
TMEM260-207ENST00000555497 C9orf78Q9NZ63 289 aaPredicted RBP29.83■■■□□ 2.37
TMEM260-207ENST00000555497 SOS2Q07890 1332 aaPredicted RBP29.83■■■□□ 2.37
TMEM260-207ENST00000555497 REC8O95072 547 aa29.81■■■□□ 2.36
TMEM260-207ENST00000555497 MTX1Q13505 466 aa29.81■■■□□ 2.36
TMEM260-207ENST00000555497 PLEKHG2Q9H7P9 1386 aa29.81■■■□□ 2.36
TMEM260-207ENST00000555497 MYL6BP14649 208 aa29.8■■■□□ 2.36
TMEM260-207ENST00000555497 RABEP1Q15276 862 aa29.8■■■□□ 2.36
TMEM260-207ENST00000555497 LINS1Q8NG48 757 aa29.8■■■□□ 2.36
TMEM260-207ENST00000555497 RILPL2Q969X0 211 aa29.8■■■□□ 2.36
TMEM260-207ENST00000555497 PRDM11Q9NQV5 511 aa29.8■■■□□ 2.36
TMEM260-207ENST00000555497 USP16Q9Y5T5 823 aa29.8■■■□□ 2.36
TMEM260-207ENST00000555497 KIF1BPQ96EK5 621 aa29.79■■■□□ 2.36
TMEM260-207ENST00000555497 AOX1Q06278 1338 aa29.79■■■□□ 2.36
TMEM260-207ENST00000555497 TRIM6-TRIM34B2RNG4 842 aa29.79■■■□□ 2.36
TMEM260-207ENST00000555497 DDX58O95786 925 aaKnown RBP29.78■■■□□ 2.36
TMEM260-207ENST00000555497 CHMLP26374 656 aa29.78■■■□□ 2.36
TMEM260-207ENST00000555497 ESYT1Q9BSJ8 1104 aa29.78■■■□□ 2.36
TMEM260-207ENST00000555497 FOXD4L1Q9NU39 408 aa29.78■■■□□ 2.36
TMEM260-207ENST00000555497 KAZALD1Q96I82 304 aa29.77■■■□□ 2.36
TMEM260-207ENST00000555497 IGKV5-2P06315 115 aa29.77■■■□□ 2.36
TMEM260-207ENST00000555497 XAGE3Q8WTP9 111 aa29.77■■■□□ 2.36
TMEM260-207ENST00000555497 WDR17Q8IZU2 1322 aa29.77■■■□□ 2.36
TMEM260-207ENST00000555497 LRP10Q7Z4F1 713 aa29.76■■■□□ 2.36
TMEM260-207ENST00000555497 UTYO14607 1347 aa29.76■■■□□ 2.35
TMEM260-207ENST00000555497 GRM8O00222 908 aa29.76■■■□□ 2.35
TMEM260-207ENST00000555497 MCM4P33991 863 aa29.76■■■□□ 2.35
TMEM260-207ENST00000555497 PIP4K2AP48426 406 aaPredicted RBP29.76■■■□□ 2.35
TMEM260-207ENST00000555497 PI4K2BQ8TCG2 481 aa29.76■■■□□ 2.35
TMEM260-207ENST00000555497 SUCLG2Q96I99 432 aa29.76■■■□□ 2.35
TMEM260-207ENST00000555497 SNRPA1P09661 255 aaKnown RBP29.75■■■□□ 2.35
TMEM260-207ENST00000555497 COPS6Q7L5N1 327 aa29.75■■■□□ 2.35
TMEM260-207ENST00000555497 RIC3Q7Z5B4 369 aa29.75■■■□□ 2.35
TMEM260-207ENST00000555497 CABP4P57796 275 aa29.75■■■□□ 2.35
TMEM260-207ENST00000555497 TTC5Q8N0Z6 440 aa29.75■■■□□ 2.35
TMEM260-207ENST00000555497 TOM1L2Q6ZVM7 507 aa29.74■■■□□ 2.35
TMEM260-207ENST00000555497 PA2G4Q9UQ80 394 aaKnown RBP29.74■■■□□ 2.35
TMEM260-207ENST00000555497 COL5A2P05997 1499 aaPredicted RBP29.73■■■□□ 2.35
TMEM260-207ENST00000555497 HSP90AB4PQ58FF6 505 aa29.72■■■□□ 2.35
TMEM260-207ENST00000555497 FMNL2Q96PY5 1086 aa29.72■■■□□ 2.35
TMEM260-207ENST00000555497 MAP4K4O95819 1239 aaPredicted RBP29.72■■■□□ 2.35
TMEM260-207ENST00000555497 LARP1Q6PKG0 1096 aaKnown RBP29.72■■■□□ 2.35
TMEM260-207ENST00000555497 GLI3P10071 1580 aa29.72■■■□□ 2.35
TMEM260-207ENST00000555497 ABCA3Q99758 1704 aa29.71■■■□□ 2.35
TMEM260-207ENST00000555497 BICC1Q9H694 974 aaKnown RBP29.71■■■□□ 2.35
TMEM260-207ENST00000555497 PARP4Q9UKK3 1724 aaKnown RBP29.71■■■□□ 2.35
TMEM260-207ENST00000555497 HSP90AA1P07900 732 aaKnown RBP29.71■■■□□ 2.35
TMEM260-207ENST00000555497 CIZ1Q9ULV3 898 aaPredicted RBP29.71■■■□□ 2.35
TMEM260-207ENST00000555497 OS9Q13438 667 aaPredicted RBP29.7■■■□□ 2.35
TMEM260-207ENST00000555497 ZCRB1Q8TBF4 217 aaKnown RBP29.7■■■□□ 2.35
TMEM260-207ENST00000555497 IL25Q9H293 177 aa29.7■■■□□ 2.35
TMEM260-207ENST00000555497 NEURL1BA8MQ27 555 aa29.69■■■□□ 2.34
TMEM260-207ENST00000555497 AK9Q5TCS8 1911 aa29.69■■■□□ 2.34
TMEM260-207ENST00000555497 METTL22Q9BUU2 404 aaPredicted RBP29.69■■■□□ 2.34
TMEM260-207ENST00000555497 MYD88Q99836 296 aa29.68■■■□□ 2.34
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms