RNA–Protein interactions for RNA: ENST00000555379.1

LINC00641-201, long intergenic non-protein coding RNA 641, humanhuman

Gene LINC00641, Length 5,425 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00641-201ENST00000555379 PPP1R12BO60237 982 aaPredicted RBP9.89□□□□□ -0.83
LINC00641-201ENST00000555379 KRT18P05783 430 aaKnown RBP9.89□□□□□ -0.83
LINC00641-201ENST00000555379 HOXB7P09629 217 aa9.89□□□□□ -0.83
LINC00641-201ENST00000555379 ANKRD24Q8TF21 1146 aa9.89□□□□□ -0.83
LINC00641-201ENST00000555379 PLCD4Q9BRC7 762 aa9.89□□□□□ -0.83
LINC00641-201ENST00000555379 NLRP1Q9C000 1473 aa9.89□□□□□ -0.83
LINC00641-201ENST00000555379 ABCC1P33527 1531 aa9.89□□□□□ -0.83
LINC00641-201ENST00000555379 POTEJP0CG39 1038 aa9.89□□□□□ -0.83
LINC00641-201ENST00000555379 RFC4P35249 363 aa9.89□□□□□ -0.83
LINC00641-201ENST00000555379 ERCC4Q92889 916 aaPredicted RBP9.89□□□□□ -0.83
LINC00641-201ENST00000555379 NPATQ14207 1427 aa9.89□□□□□ -0.83
LINC00641-201ENST00000555379 VPS37CA5D8V6 355 aaPredicted RBP9.89□□□□□ -0.83
LINC00641-201ENST00000555379 SRGAP3O43295 1099 aa9.89□□□□□ -0.83
LINC00641-201ENST00000555379 FGFR1OPO95684 399 aaKnown RBP9.89□□□□□ -0.83
LINC00641-201ENST00000555379 HMGN5P82970 282 aaKnown RBP9.89□□□□□ -0.83
LINC00641-201ENST00000555379 DZIP1Q86YF9 867 aaKnown RBP9.89□□□□□ -0.83
LINC00641-201ENST00000555379 RTL1A6NKG5 1358 aa9.89□□□□□ -0.83
LINC00641-201ENST00000555379 SENP3-EIF4A1A0A087X0R7 540 aa9.89□□□□□ -0.83
LINC00641-201ENST00000555379 CBFA2T2O43439 604 aa9.89□□□□□ -0.83
LINC00641-201ENST00000555379 IL2RBP14784 551 aa9.89□□□□□ -0.83
LINC00641-201ENST00000555379 BLOC1S2Q6QNY1 142 aa9.89□□□□□ -0.83
LINC00641-201ENST00000555379 IQCA1Q86XH1 822 aa9.89□□□□□ -0.83
LINC00641-201ENST00000555379 CRACR2BQ8N4Y2 399 aaPredicted RBP9.89□□□□□ -0.83
LINC00641-201ENST00000555379 GIMAP7Q8NHV1 300 aa9.89□□□□□ -0.83
LINC00641-201ENST00000555379 CABP5Q9NP86 173 aa9.89□□□□□ -0.83
LINC00641-201ENST00000555379 SH2B1Q9NRF2 756 aaPredicted RBP9.89□□□□□ -0.83
LINC00641-201ENST00000555379 CALCOCO1Q9P1Z2 691 aa9.89□□□□□ -0.83
LINC00641-201ENST00000555379 NOB1Q9ULX3 412 aaKnown RBP9.89□□□□□ -0.83
LINC00641-201ENST00000555379 CCDC191Q8NCU4 936 aa9.88□□□□□ -0.83
LINC00641-201ENST00000555379 LNPKQ9C0E8 428 aa9.88□□□□□ -0.83
LINC00641-201ENST00000555379 INSRP06213 1382 aa9.88□□□□□ -0.83
LINC00641-201ENST00000555379 MYO5CQ9NQX4 1742 aa9.88□□□□□ -0.83
LINC00641-201ENST00000555379 ADGRF5Q8IZF2 1346 aa9.88□□□□□ -0.83
LINC00641-201ENST00000555379 ADGBQ8N7X0 1667 aa9.88□□□□□ -0.83
LINC00641-201ENST00000555379 KIF5BP33176 963 aa9.88□□□□□ -0.83
LINC00641-201ENST00000555379 PDE6BP35913 854 aa9.88□□□□□ -0.83
LINC00641-201ENST00000555379 DDB1Q16531 1140 aa9.88□□□□□ -0.83
LINC00641-201ENST00000555379 ANKRD2Q9GZV1 360 aa9.88□□□□□ -0.83
LINC00641-201ENST00000555379 ZNHIT6Q9NWK9 470 aaKnown RBP9.88□□□□□ -0.83
LINC00641-201ENST00000555379 STXBP4Q6ZWJ1 553 aa9.88□□□□□ -0.83
LINC00641-201ENST00000555379 AACSQ86V21 672 aa9.88□□□□□ -0.83
LINC00641-201ENST00000555379 ZSCAN29Q8IWY8 852 aaPredicted RBP9.88□□□□□ -0.83
LINC00641-201ENST00000555379 SUPT20HQ8NEM7 779 aa9.88□□□□□ -0.83
LINC00641-201ENST00000555379 FOXO3O43524 673 aa9.87□□□□□ -0.83
LINC00641-201ENST00000555379 TRMT112Q9UI30 125 aaKnown RBP9.87□□□□□ -0.83
LINC00641-201ENST00000555379 BMP15O95972 392 aa9.87□□□□□ -0.83
LINC00641-201ENST00000555379 CREBRFQ8IUR6 639 aa9.87□□□□□ -0.83
LINC00641-201ENST00000555379 PSMD1Q99460 953 aa9.87□□□□□ -0.83
LINC00641-201ENST00000555379 HMG20BQ9P0W2 317 aa9.87□□□□□ -0.83
LINC00641-201ENST00000555379 PRAG1Q86YV5 1406 aa9.87□□□□□ -0.83
LINC00641-201ENST00000555379 FYB1O15117 783 aa9.87□□□□□ -0.83
LINC00641-201ENST00000555379 SLFN5Q08AF3 891 aa9.87□□□□□ -0.83
LINC00641-201ENST00000555379 STK38Q15208 465 aa9.87□□□□□ -0.83
LINC00641-201ENST00000555379 CAVIN1Q6NZI2 390 aaKnown RBP9.87□□□□□ -0.83
LINC00641-201ENST00000555379 EDC4Q6P2E9 1401 aaKnown RBP9.87□□□□□ -0.83
LINC00641-201ENST00000555379 USP5P45974 858 aa9.87□□□□□ -0.83
LINC00641-201ENST00000555379 MRE11P49959 708 aa9.87□□□□□ -0.83
LINC00641-201ENST00000555379 PARP10Q53GL7 1025 aa9.87□□□□□ -0.83
LINC00641-201ENST00000555379 NOL8Q76FK4 1167 aaKnown RBP9.87□□□□□ -0.83
LINC00641-201ENST00000555379 DCAF5Q96JK2 942 aa9.87□□□□□ -0.83
LINC00641-201ENST00000555379 DISP1Q96F81 1524 aa9.87□□□□□ -0.83
LINC00641-201ENST00000555379 POLR3AO14802 1390 aaPredicted RBP9.87□□□□□ -0.83
LINC00641-201ENST00000555379 MAST3O60307 1309 aa9.86□□□□□ -0.83
LINC00641-201ENST00000555379 GNAQP50148 359 aa9.86□□□□□ -0.83
LINC00641-201ENST00000555379 FBXO31Q5XUX0 539 aaPredicted RBP9.86□□□□□ -0.83
LINC00641-201ENST00000555379 TMTC2Q8N394 836 aa9.86□□□□□ -0.83
LINC00641-201ENST00000555379 YEATS2Q9ULM3 1422 aa9.86□□□□□ -0.83
LINC00641-201ENST00000555379 LEKR1Q6ZMV7 388 aa9.86□□□□□ -0.83
LINC00641-201ENST00000555379 CTCFLQ8NI51 663 aaPredicted RBP9.86□□□□□ -0.83
LINC00641-201ENST00000555379 SDF4Q9BRK5 362 aa9.86□□□□□ -0.83
LINC00641-201ENST00000555379 BCCIPQ9P287 314 aaKnown RBP eCLIP9.86□□□□□ -0.83
LINC00641-201ENST00000555379 PDE4BQ07343 736 aa9.86□□□□□ -0.83
LINC00641-201ENST00000555379 RRP12Q5JTH9 1297 aaKnown RBP9.86□□□□□ -0.83
LINC00641-201ENST00000555379 ANKRD18AQ8IVF6 992 aa9.86□□□□□ -0.83
LINC00641-201ENST00000555379 NAP1L4Q99733 375 aaKnown RBP9.86□□□□□ -0.83
LINC00641-201ENST00000555379 POLR3DP05423 398 aaPredicted RBP9.85□□□□□ -0.83
LINC00641-201ENST00000555379 MYL6BP14649 208 aa9.85□□□□□ -0.83
LINC00641-201ENST00000555379 WAPLQ7Z5K2 1190 aa9.85□□□□□ -0.83
LINC00641-201ENST00000555379 SPRYD3Q8NCJ5 442 aa9.85□□□□□ -0.83
LINC00641-201ENST00000555379 ANKIB1Q9P2G1 1089 aa9.85□□□□□ -0.83
LINC00641-201ENST00000555379 YTHDC2Q9H6S0 1430 aaKnown RBP9.85□□□□□ -0.83
LINC00641-201ENST00000555379 KRT85P78386 507 aa9.85□□□□□ -0.83
LINC00641-201ENST00000555379 RRS1Q15050 365 aaKnown RBP9.85□□□□□ -0.83
LINC00641-201ENST00000555379 TMEM266Q2M3C6 531 aa9.85□□□□□ -0.83
LINC00641-201ENST00000555379 STK32BQ9NY57 414 aa9.85□□□□□ -0.83
LINC00641-201ENST00000555379 CHD1LQ86WJ1 897 aa9.85□□□□□ -0.83
LINC00641-201ENST00000555379 MLH3Q9UHC1 1453 aa9.85□□□□□ -0.83
LINC00641-201ENST00000555379 CETN2P41208 172 aa9.85□□□□□ -0.83
LINC00641-201ENST00000555379 ZNF444Q8N0Y2 327 aaPredicted RBP9.85□□□□□ -0.83
LINC00641-201ENST00000555379 CCDC39Q9UFE4 941 aa9.85□□□□□ -0.83
LINC00641-201ENST00000555379 BAG4O95429 457 aaKnown RBP9.85□□□□□ -0.83
LINC00641-201ENST00000555379 GNAT2P19087 354 aa9.85□□□□□ -0.83
LINC00641-201ENST00000555379 ZNF76P36508 570 aa9.85□□□□□ -0.83
LINC00641-201ENST00000555379 ZNF804AQ7Z570 1209 aa9.85□□□□□ -0.83
LINC00641-201ENST00000555379 BRPF3Q9ULD4 1205 aa9.85□□□□□ -0.83
LINC00641-201ENST00000555379 SH2D4AQ9H788 454 aa9.84□□□□□ -0.83
LINC00641-201ENST00000555379 PNMA2Q9UL42 364 aa9.84□□□□□ -0.83
LINC00641-201ENST00000555379 PDZRN3Q9UPQ7 1066 aa9.84□□□□□ -0.83
LINC00641-201ENST00000555379 KDM5DQ9BY66 1539 aa9.84□□□□□ -0.83
LINC00641-201ENST00000555379 ADAMTS2O95450 1211 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms