RNA–Protein interactions for RNA: ENST00000555314.1

TMEM253-205, Transcript of transmembrane protein 253, humanhuman

TSL 3

Gene TMEM253, Length 605 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM253-205ENST00000555314 N4BP2Q86UW6 1770 aaPredicted RBP17.04■□□□□ 0.32
TMEM253-205ENST00000555314 KLRG1Q96E93 195 aa17.03■□□□□ 0.32
TMEM253-205ENST00000555314 NARFQ9UHQ1 456 aa17.03■□□□□ 0.32
TMEM253-205ENST00000555314 CHRNA5P30532 468 aa17.02■□□□□ 0.32
TMEM253-205ENST00000555314 DNAJC10Q8IXB1 793 aa17.02■□□□□ 0.32
TMEM253-205ENST00000555314 BRCA1P38398 1863 aaKnown RBP17.01■□□□□ 0.31
TMEM253-205ENST00000555314 ARFGEF1Q9Y6D6 1849 aa17.01■□□□□ 0.31
TMEM253-205ENST00000555314 AMER1Q5JTC6 1135 aaPredicted RBP17.01■□□□□ 0.31
TMEM253-205ENST00000555314 USPL1Q5W0Q7 1092 aa17.01■□□□□ 0.31
TMEM253-205ENST00000555314 MRC1P22897 1456 aa17■□□□□ 0.31
TMEM253-205ENST00000555314 RNMTO43148 476 aaKnown RBP17■□□□□ 0.31
TMEM253-205ENST00000555314 LMNB1P20700 586 aa17■□□□□ 0.31
TMEM253-205ENST00000555314 NFIXQ14938 502 aa17■□□□□ 0.31
TMEM253-205ENST00000555314 SMC1BQ8NDV3 1235 aa17■□□□□ 0.31
TMEM253-205ENST00000555314 RRAGCQ9HB90 399 aa16.99■□□□□ 0.31
TMEM253-205ENST00000555314 LGR6Q9HBX8 967 aa16.99■□□□□ 0.31
TMEM253-205ENST00000555314 PDZRN3Q9UPQ7 1066 aa16.99■□□□□ 0.31
TMEM253-205ENST00000555314 KCPQ6ZWJ8 1503 aa16.98■□□□□ 0.31
TMEM253-205ENST00000555314 TTLL6Q8N841 843 aa16.98■□□□□ 0.31
TMEM253-205ENST00000555314 COL15A1P39059 1388 aa16.98■□□□□ 0.31
TMEM253-205ENST00000555314 TJP1Q07157 1748 aa16.97■□□□□ 0.31
TMEM253-205ENST00000555314 GLTPD2A6NH11 291 aa16.97■□□□□ 0.31
TMEM253-205ENST00000555314 STARD3NLO95772 234 aa16.97■□□□□ 0.31
TMEM253-205ENST00000555314 SERPINB2P05120 415 aa16.97■□□□□ 0.31
TMEM253-205ENST00000555314 VEGFAP15692 232 aaPredicted RBP16.97■□□□□ 0.31
TMEM253-205ENST00000555314 BCL2L12Q9HB09 334 aa16.97■□□□□ 0.31
TMEM253-205ENST00000555314 ADAMTS7Q9UKP4 1686 aa16.97■□□□□ 0.31
TMEM253-205ENST00000555314 A0A087WZG4 1122 aa16.96■□□□□ 0.31
TMEM253-205ENST00000555314 MYCNP04198 464 aaPredicted RBP16.96■□□□□ 0.31
TMEM253-205ENST00000555314 ZBTB1Q9Y2K1 713 aa16.96■□□□□ 0.31
TMEM253-205ENST00000555314 H0YIN7 160 aa16.95■□□□□ 0.3
TMEM253-205ENST00000555314 EIF5P55010 431 aaKnown RBP16.95■□□□□ 0.3
TMEM253-205ENST00000555314 SLC39A6Q13433 755 aa16.95■□□□□ 0.3
TMEM253-205ENST00000555314 TEX13AQ9BXU3 409 aaPredicted RBP16.95■□□□□ 0.3
TMEM253-205ENST00000555314 MTHFSDQ2M296 383 aaKnown RBP16.94■□□□□ 0.3
TMEM253-205ENST00000555314 SCN11AQ9UI33 1791 aa16.94■□□□□ 0.3
TMEM253-205ENST00000555314 DIAPH1O60610 1272 aaKnown RBP16.93■□□□□ 0.3
TMEM253-205ENST00000555314 PCGF6Q9BYE7 350 aa16.93■□□□□ 0.3
TMEM253-205ENST00000555314 PER1O15534 1290 aaPredicted RBP16.92■□□□□ 0.3
TMEM253-205ENST00000555314 HMOX1P09601 288 aa16.92■□□□□ 0.3
TMEM253-205ENST00000555314 RASSF7Q02833 373 aa16.92■□□□□ 0.3
TMEM253-205ENST00000555314 C2CD5Q86YS7 1000 aa16.92■□□□□ 0.3
TMEM253-205ENST00000555314 TTC5Q8N0Z6 440 aa16.92■□□□□ 0.3
TMEM253-205ENST00000555314 BRIP1Q9BX63 1249 aa16.92■□□□□ 0.3
TMEM253-205ENST00000555314 WDR90Q96KV7 1748 aa16.92■□□□□ 0.3
TMEM253-205ENST00000555314 NRXN2Q9P2S2 1712 aa16.91■□□□□ 0.3
TMEM253-205ENST00000555314 NFKBIEO00221 500 aa16.91■□□□□ 0.3
TMEM253-205ENST00000555314 PDE6BP35913 854 aa16.91■□□□□ 0.3
TMEM253-205ENST00000555314 HTRA3P83110 453 aa16.91■□□□□ 0.3
TMEM253-205ENST00000555314 DPY19L2Q6NUT2 758 aa16.91■□□□□ 0.3
TMEM253-205ENST00000555314 TNRC6CQ9HCJ0 1690 aaKnown RBP16.91■□□□□ 0.3
TMEM253-205ENST00000555314 ATXN8OSP0DMR3 200 aa16.9■□□□□ 0.3
TMEM253-205ENST00000555314 CANXP27824 592 aaKnown RBP16.9■□□□□ 0.3
TMEM253-205ENST00000555314 PRELPP51888 382 aa16.9■□□□□ 0.3
TMEM253-205ENST00000555314 NPC1L1Q9UHC9 1359 aa16.89■□□□□ 0.3
TMEM253-205ENST00000555314 IL6STP40189 918 aaPredicted RBP16.89■□□□□ 0.29
TMEM253-205ENST00000555314 ZNF790Q6PG37 636 aa16.89■□□□□ 0.29
TMEM253-205ENST00000555314 GAS2L2Q8NHY3 880 aa16.89■□□□□ 0.29
TMEM253-205ENST00000555314 LTBP3Q9NS15 1303 aa16.89■□□□□ 0.29
TMEM253-205ENST00000555314 TEFQ10587 303 aa16.88■□□□□ 0.29
TMEM253-205ENST00000555314 COL13A1Q5TAT6 717 aaPredicted RBP16.88■□□□□ 0.29
TMEM253-205ENST00000555314 ZNF496Q96IT1 587 aaPredicted RBP16.88■□□□□ 0.29
TMEM253-205ENST00000555314 KIF7Q2M1P5 1343 aa16.88■□□□□ 0.29
TMEM253-205ENST00000555314 CARMIL3Q8ND23 1372 aa16.88■□□□□ 0.29
TMEM253-205ENST00000555314 HEG1Q9ULI3 1381 aa16.88■□□□□ 0.29
TMEM253-205ENST00000555314 SBF1O95248 1867 aa16.87■□□□□ 0.29
TMEM253-205ENST00000555314 GNAT3A8MTJ3 354 aa16.87■□□□□ 0.29
TMEM253-205ENST00000555314 IL17REQ8NFR9 667 aa16.87■□□□□ 0.29
TMEM253-205ENST00000555314 PCNTO95613 3336 aa16.86■□□□□ 0.29
TMEM253-205ENST00000555314 SOGA3Q5TF21 947 aa16.86■□□□□ 0.29
TMEM253-205ENST00000555314 TBC1D9BQ66K14 1250 aa16.86■□□□□ 0.29
TMEM253-205ENST00000555314 PRR5LQ6MZQ0 368 aa16.86■□□□□ 0.29
TMEM253-205ENST00000555314 FMNL2Q96PY5 1086 aa16.86■□□□□ 0.29
TMEM253-205ENST00000555314 POTECB2RU33 542 aa16.85■□□□□ 0.29
TMEM253-205ENST00000555314 RGL2O15211 777 aa16.85■□□□□ 0.29
TMEM253-205ENST00000555314 ERFEQ4G0M1 354 aa16.85■□□□□ 0.29
TMEM253-205ENST00000555314 STYK1Q6J9G0 422 aa16.85■□□□□ 0.29
TMEM253-205ENST00000555314 BICDL1Q6ZP65 573 aa16.85■□□□□ 0.29
TMEM253-205ENST00000555314 NPM2Q86SE8 214 aaKnown RBP16.85■□□□□ 0.29
TMEM253-205ENST00000555314 CNKSR1Q969H4 720 aa16.85■□□□□ 0.29
TMEM253-205ENST00000555314 SETDB2Q96T68 719 aa16.84■□□□□ 0.29
TMEM253-205ENST00000555314 CEMIPQ8WUJ3 1361 aa16.84■□□□□ 0.29
TMEM253-205ENST00000555314 AFDNP55196 1824 aaKnown RBP16.83■□□□□ 0.28
TMEM253-205ENST00000555314 CLEC4GQ6UXB4 293 aa16.83■□□□□ 0.28
TMEM253-205ENST00000555314 TNS4Q8IZW8 715 aa16.83■□□□□ 0.28
TMEM253-205ENST00000555314 CNBD1Q8NA66 436 aa16.83■□□□□ 0.28
TMEM253-205ENST00000555314 ZNF622Q969S3 477 aaKnown RBP eCLIP16.83■□□□□ 0.28
TMEM253-205ENST00000555314 TAOK3Q9H2K8 898 aa16.83■□□□□ 0.28
TMEM253-205ENST00000555314 DLEC1Q9Y238 1755 aa16.83■□□□□ 0.28
TMEM253-205ENST00000555314 UBR2Q8IWV8 1755 aa16.82■□□□□ 0.28
TMEM253-205ENST00000555314 C21orf2O43822 256 aa16.82■□□□□ 0.28
TMEM253-205ENST00000555314 CAMTA2O94983 1202 aa16.82■□□□□ 0.28
TMEM253-205ENST00000555314 SRGNP10124 158 aa16.82■□□□□ 0.28
TMEM253-205ENST00000555314 CC2D1BQ5T0F9 858 aaKnown RBP16.82■□□□□ 0.28
TMEM253-205ENST00000555314 TBC1D2BQ9UPU7 963 aa16.82■□□□□ 0.28
TMEM253-205ENST00000555314 ST5P78524 1137 aa16.81■□□□□ 0.28
TMEM253-205ENST00000555314 CCER1Q8TC90 406 aaPredicted RBP16.81■□□□□ 0.28
TMEM253-205ENST00000555314 MASTLQ96GX5 879 aa16.81■□□□□ 0.28
TMEM253-205ENST00000555314 CREBZFQ9NS37 354 aa16.81■□□□□ 0.28
TMEM253-205ENST00000555314 COL3A1P02461 1466 aaPredicted RBP16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms