RNA–Protein interactions for RNA: ENST00000555305.5

IFT43-209, Transcript of intraflagellar transport 43, humanhuman

TSL 2

Gene IFT43, Length 1,765 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43-209ENST00000555305 USP44Q9H0E7 712 aa18.06■□□□□ 0.48
IFT43-209ENST00000555305 NOP58Q9Y2X3 529 aaKnown RBP18.06■□□□□ 0.48
IFT43-209ENST00000555305 BTG4Q9NY30 223 aa18.05■□□□□ 0.48
IFT43-209ENST00000555305 ADCY9O60503 1353 aa18.04■□□□□ 0.48
IFT43-209ENST00000555305 ZNF496Q96IT1 587 aaPredicted RBP18.04■□□□□ 0.48
IFT43-209ENST00000555305 CDCA7Q9BWT1 371 aaPredicted RBP18.04■□□□□ 0.48
IFT43-209ENST00000555305 MSH5O43196 834 aa18.03■□□□□ 0.48
IFT43-209ENST00000555305 SLC39A6Q13433 755 aa18.03■□□□□ 0.48
IFT43-209ENST00000555305 LINS1Q8NG48 757 aa18.02■□□□□ 0.48
IFT43-209ENST00000555305 NEXNQ0ZGT2 675 aa18.02■□□□□ 0.47
IFT43-209ENST00000555305 MAP3K2Q9Y2U5 619 aa18.02■□□□□ 0.47
IFT43-209ENST00000555305 PDIA6Q15084 440 aa18.01■□□□□ 0.47
IFT43-209ENST00000555305 DAXXQ9UER7 740 aaPredicted RBP18.01■□□□□ 0.47
IFT43-209ENST00000555305 LRRFIP2Q9Y608 721 aaKnown RBP18.01■□□□□ 0.47
IFT43-209ENST00000555305 RAB11FIP3O75154 756 aa18■□□□□ 0.47
IFT43-209ENST00000555305 HSP90AB4PQ58FF6 505 aa18■□□□□ 0.47
IFT43-209ENST00000555305 THRAP3Q9Y2W1 955 aaKnown RBP18■□□□□ 0.47
IFT43-209ENST00000555305 PLCH1Q4KWH8 1693 aa18■□□□□ 0.47
IFT43-209ENST00000555305 SSH3Q8TE77 659 aa17.99■□□□□ 0.47
IFT43-209ENST00000555305 COL16A1Q07092 1604 aaPredicted RBP17.99■□□□□ 0.47
IFT43-209ENST00000555305 DISP2A7MBM2 1401 aa17.99■□□□□ 0.47
IFT43-209ENST00000555305 PHLPP1O60346 1717 aa17.99■□□□□ 0.47
IFT43-209ENST00000555305 DDX54Q8TDD1 881 aaKnown RBP17.99■□□□□ 0.47
IFT43-209ENST00000555305 LRRCC1Q9C099 1032 aa17.99■□□□□ 0.47
IFT43-209ENST00000555305 C9orf78Q9NZ63 289 aaPredicted RBP17.99■□□□□ 0.47
IFT43-209ENST00000555305 LAMB4A4D0S4 1761 aa17.98■□□□□ 0.47
IFT43-209ENST00000555305 PRAMEF22A3QJZ6 481 aa17.98■□□□□ 0.47
IFT43-209ENST00000555305 MTX1Q13505 466 aa17.98■□□□□ 0.47
IFT43-209ENST00000555305 PROSER3Q2NL68 480 aa17.98■□□□□ 0.47
IFT43-209ENST00000555305 RIC3Q7Z5B4 369 aa17.98■□□□□ 0.47
IFT43-209ENST00000555305 PLEKHM2Q8IWE5 1019 aa17.98■□□□□ 0.47
IFT43-209ENST00000555305 C5P01031 1676 aa17.97■□□□□ 0.47
IFT43-209ENST00000555305 ANXA1P04083 346 aa17.97■□□□□ 0.47
IFT43-209ENST00000555305 TEX13AQ9BXU3 409 aaPredicted RBP17.97■□□□□ 0.47
IFT43-209ENST00000555305 OSBPL3Q9H4L5 887 aa17.97■□□□□ 0.47
IFT43-209ENST00000555305 TMOD3Q9NYL9 352 aa17.97■□□□□ 0.47
IFT43-209ENST00000555305 UTYO14607 1347 aa17.97■□□□□ 0.47
IFT43-209ENST00000555305 TNS2Q63HR2 1409 aa17.97■□□□□ 0.47
IFT43-209ENST00000555305 PAPPAQ13219 1627 aa17.97■□□□□ 0.47
IFT43-209ENST00000555305 POLA2Q14181 598 aa17.96■□□□□ 0.47
IFT43-209ENST00000555305 TBC1D32Q96NH3 1257 aa17.96■□□□□ 0.47
IFT43-209ENST00000555305 SHANK3Q9BYB0 1731 aa17.96■□□□□ 0.47
IFT43-209ENST00000555305 TTC22Q5TAA0 569 aa17.96■□□□□ 0.47
IFT43-209ENST00000555305 ANKRD13DQ6ZTN6 518 aa17.96■□□□□ 0.47
IFT43-209ENST00000555305 VSIG10Q8N0Z9 540 aa17.96■□□□□ 0.47
IFT43-209ENST00000555305 LRP6O75581 1613 aa17.96■□□□□ 0.47
IFT43-209ENST00000555305 UBR2Q8IWV8 1755 aa17.96■□□□□ 0.46
IFT43-209ENST00000555305 EXOC5O00471 708 aa17.95■□□□□ 0.46
IFT43-209ENST00000555305 CDC45O75419 566 aa17.95■□□□□ 0.46
IFT43-209ENST00000555305 CASC1Q6TDU7 716 aa17.95■□□□□ 0.46
IFT43-209ENST00000555305 METTL22Q9BUU2 404 aaPredicted RBP17.95■□□□□ 0.46
IFT43-209ENST00000555305 USP35Q9P2H5 1018 aa17.95■□□□□ 0.46
IFT43-209ENST00000555305 USP16Q9Y5T5 823 aa17.95■□□□□ 0.46
IFT43-209ENST00000555305 PNMA6EA0A0J9YXQ4 647 aa17.94■□□□□ 0.46
IFT43-209ENST00000555305 GRM8O00222 908 aa17.94■□□□□ 0.46
IFT43-209ENST00000555305 NBPF7P0C2Y1 421 aaPredicted RBP17.94■□□□□ 0.46
IFT43-209ENST00000555305 BECN1Q14457 450 aa17.94■□□□□ 0.46
IFT43-209ENST00000555305 COPS6Q7L5N1 327 aa17.94■□□□□ 0.46
IFT43-209ENST00000555305 XAGE3Q8WTP9 111 aa17.94■□□□□ 0.46
IFT43-209ENST00000555305 SEC24BO95487 1268 aa17.94■□□□□ 0.46
IFT43-209ENST00000555305 MYL6BP14649 208 aa17.94■□□□□ 0.46
IFT43-209ENST00000555305 AIMP1Q12904 312 aaKnown RBP17.94■□□□□ 0.46
IFT43-209ENST00000555305 PPP1R42Q7Z4L9 355 aa17.94■□□□□ 0.46
IFT43-209ENST00000555305 KCPQ6ZWJ8 1503 aa17.93■□□□□ 0.46
IFT43-209ENST00000555305 AOX1Q06278 1338 aa17.93■□□□□ 0.46
IFT43-209ENST00000555305 SRGAP3O43295 1099 aa17.93■□□□□ 0.46
IFT43-209ENST00000555305 LRP10Q7Z4F1 713 aa17.93■□□□□ 0.46
IFT43-209ENST00000555305 PLBD2Q8NHP8 589 aa17.93■□□□□ 0.46
IFT43-209ENST00000555305 GLI3P10071 1580 aa17.92■□□□□ 0.46
IFT43-209ENST00000555305 ERC1Q8IUD2 1116 aa17.91■□□□□ 0.46
IFT43-209ENST00000555305 KIF1BPQ96EK5 621 aa17.91■□□□□ 0.46
IFT43-209ENST00000555305 ANP32EQ9BTT0 268 aa17.91■□□□□ 0.46
IFT43-209ENST00000555305 C22orf23Q9BZE7 217 aa17.91■□□□□ 0.46
IFT43-209ENST00000555305 EXOC6BQ9Y2D4 811 aa17.91■□□□□ 0.46
IFT43-209ENST00000555305 COL15A1P39059 1388 aa17.91■□□□□ 0.46
IFT43-209ENST00000555305 NEURL1BA8MQ27 555 aa17.9■□□□□ 0.46
IFT43-209ENST00000555305 SURF6O75683 361 aaKnown RBP17.9■□□□□ 0.46
IFT43-209ENST00000555305 MFAP1P55081 439 aaKnown RBP17.9■□□□□ 0.46
IFT43-209ENST00000555305 SPATA31A1Q5TZJ5 1347 aa17.9■□□□□ 0.46
IFT43-209ENST00000555305 PDE1AP54750 535 aa17.89■□□□□ 0.45
IFT43-209ENST00000555305 GCKRQ14397 625 aa17.89■□□□□ 0.45
IFT43-209ENST00000555305 STAP2Q9UGK3 403 aa17.89■□□□□ 0.45
IFT43-209ENST00000555305 NWD2Q9ULI1 1742 aa17.89■□□□□ 0.45
IFT43-209ENST00000555305 APBB1O00213 710 aa17.89■□□□□ 0.45
IFT43-209ENST00000555305 RBM25P49756 843 aaKnown RBP17.89■□□□□ 0.45
IFT43-209ENST00000555305 CWF19L2Q2TBE0 894 aaKnown RBP17.89■□□□□ 0.45
IFT43-209ENST00000555305 TBC1D9Q6ZT07 1266 aa17.89■□□□□ 0.45
IFT43-209ENST00000555305 SMARCA5O60264 1052 aaPredicted RBP17.88■□□□□ 0.45
IFT43-209ENST00000555305 IGKV5-2P06315 115 aa17.88■□□□□ 0.45
IFT43-209ENST00000555305 GSPT1P15170 499 aaKnown RBP17.88■□□□□ 0.45
IFT43-209ENST00000555305 MX1P20591 662 aa17.88■□□□□ 0.45
IFT43-209ENST00000555305 BARGINQ6ZT62 677 aa17.88■□□□□ 0.45
IFT43-209ENST00000555305 WNK3Q9BYP7 1800 aa17.88■□□□□ 0.45
IFT43-209ENST00000555305 SALL3Q9BXA9 1300 aa17.87■□□□□ 0.45
IFT43-209ENST00000555305 STARD3NLO95772 234 aa17.87■□□□□ 0.45
IFT43-209ENST00000555305 PIP4K2BP78356 416 aa17.87■□□□□ 0.45
IFT43-209ENST00000555305 C16orf71Q8IYS4 520 aaPredicted RBP17.87■□□□□ 0.45
IFT43-209ENST00000555305 MYD88Q99836 296 aa17.87■□□□□ 0.45
IFT43-209ENST00000555305 NRAPQ86VF7 1730 aa17.87■□□□□ 0.45
IFT43-209ENST00000555305 BCL9O00512 1426 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms