RNA–Protein interactions for RNA: ENST00000555231.5

XRCC3-212, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 3

Gene XRCC3, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-212ENST00000555231 KDM2BQ8NHM5 1336 aa17.89■□□□□ 0.45
XRCC3-212ENST00000555231 CLSPNQ9HAW4 1339 aa17.89■□□□□ 0.45
XRCC3-212ENST00000555231 HMOX1P09601 288 aa17.88■□□□□ 0.45
XRCC3-212ENST00000555231 TNRC6CQ9HCJ0 1690 aaKnown RBP17.87■□□□□ 0.45
XRCC3-212ENST00000555231 CCDC88AQ3V6T2 1871 aa17.87■□□□□ 0.45
XRCC3-212ENST00000555231 RNMTO43148 476 aaKnown RBP17.87■□□□□ 0.45
XRCC3-212ENST00000555231 CYP19A1P11511 503 aaPredicted RBP17.87■□□□□ 0.45
XRCC3-212ENST00000555231 RASSF7Q02833 373 aa17.87■□□□□ 0.45
XRCC3-212ENST00000555231 NFIXQ14938 502 aa17.86■□□□□ 0.45
XRCC3-212ENST00000555231 ZBTB1Q9Y2K1 713 aa17.86■□□□□ 0.45
XRCC3-212ENST00000555231 NRXN2Q9P2S2 1712 aa17.86■□□□□ 0.45
XRCC3-212ENST00000555231 MRC1P22897 1456 aa17.85■□□□□ 0.45
XRCC3-212ENST00000555231 COL15A1P39059 1388 aa17.85■□□□□ 0.45
XRCC3-212ENST00000555231 FSTL1Q12841 308 aa17.85■□□□□ 0.45
XRCC3-212ENST00000555231 NARFQ9UHQ1 456 aa17.85■□□□□ 0.45
XRCC3-212ENST00000555231 DLEC1Q9Y238 1755 aa17.85■□□□□ 0.45
XRCC3-212ENST00000555231 KLRG1Q96E93 195 aa17.84■□□□□ 0.45
XRCC3-212ENST00000555231 BCL2L12Q9HB09 334 aa17.84■□□□□ 0.45
XRCC3-212ENST00000555231 SERPINB2P05120 415 aa17.83■□□□□ 0.44
XRCC3-212ENST00000555231 MTHFSDQ2M296 383 aaKnown RBP17.83■□□□□ 0.44
XRCC3-212ENST00000555231 AMER1Q5JTC6 1135 aaPredicted RBP17.83■□□□□ 0.44
XRCC3-212ENST00000555231 CANXP27824 592 aaKnown RBP17.82■□□□□ 0.44
XRCC3-212ENST00000555231 PRELPP51888 382 aa17.82■□□□□ 0.44
XRCC3-212ENST00000555231 UBR2Q8IWV8 1755 aa17.81■□□□□ 0.44
XRCC3-212ENST00000555231 CARMIL3Q8ND23 1372 aa17.81■□□□□ 0.44
XRCC3-212ENST00000555231 BICDL1Q6ZP65 573 aa17.81■□□□□ 0.44
XRCC3-212ENST00000555231 TIAM2Q8IVF5 1701 aa17.81■□□□□ 0.44
XRCC3-212ENST00000555231 C2CD5Q86YS7 1000 aa17.8■□□□□ 0.44
XRCC3-212ENST00000555231 LMNB1P20700 586 aa17.79■□□□□ 0.44
XRCC3-212ENST00000555231 TTLL6Q8N841 843 aa17.79■□□□□ 0.44
XRCC3-212ENST00000555231 SMC1BQ8NDV3 1235 aa17.79■□□□□ 0.44
XRCC3-212ENST00000555231 ANKRD31Q8N7Z5 1873 aa17.79■□□□□ 0.44
XRCC3-212ENST00000555231 DIAPH1O60610 1272 aaKnown RBP17.78■□□□□ 0.44
XRCC3-212ENST00000555231 VSIG10Q8N0Z9 540 aa17.78■□□□□ 0.44
XRCC3-212ENST00000555231 JMYQ8N9B5 988 aa17.78■□□□□ 0.44
XRCC3-212ENST00000555231 GLTPD2A6NH11 291 aa17.77■□□□□ 0.44
XRCC3-212ENST00000555231 H0YIN7 160 aa17.77■□□□□ 0.44
XRCC3-212ENST00000555231 CC2D1BQ5T0F9 858 aaKnown RBP17.77■□□□□ 0.44
XRCC3-212ENST00000555231 COL13A1Q5TAT6 717 aaPredicted RBP17.77■□□□□ 0.44
XRCC3-212ENST00000555231 CCDC24Q8N4L8 307 aa17.77■□□□□ 0.44
XRCC3-212ENST00000555231 KIF7Q2M1P5 1343 aa17.76■□□□□ 0.43
XRCC3-212ENST00000555231 ZC3H4Q9UPT8 1303 aaKnown RBP17.76■□□□□ 0.43
XRCC3-212ENST00000555231 NFKBIEO00221 500 aa17.76■□□□□ 0.43
XRCC3-212ENST00000555231 EIF5P55010 431 aaKnown RBP17.76■□□□□ 0.43
XRCC3-212ENST00000555231 CNGB1Q14028 1251 aaPredicted RBP17.76■□□□□ 0.43
XRCC3-212ENST00000555231 TTC5Q8N0Z6 440 aa17.76■□□□□ 0.43
XRCC3-212ENST00000555231 ZNF219Q9P2Y4 722 aaPredicted RBP17.76■□□□□ 0.43
XRCC3-212ENST00000555231 ZNF330Q9Y3S2 320 aaPredicted RBP17.76■□□□□ 0.43
XRCC3-212ENST00000555231 CACNA1SQ13698 1873 aa17.75■□□□□ 0.43
XRCC3-212ENST00000555231 VEGFAP15692 232 aaPredicted RBP17.75■□□□□ 0.43
XRCC3-212ENST00000555231 TBC1D9BQ66K14 1250 aa17.75■□□□□ 0.43
XRCC3-212ENST00000555231 COL11A2P13942 1736 aaPredicted RBP17.75■□□□□ 0.43
XRCC3-212ENST00000555231 SCN7AQ01118 1682 aa17.74■□□□□ 0.43
XRCC3-212ENST00000555231 STARD3NLO95772 234 aa17.74■□□□□ 0.43
XRCC3-212ENST00000555231 CCER1Q8TC90 406 aaPredicted RBP17.74■□□□□ 0.43
XRCC3-212ENST00000555231 ZNF622Q969S3 477 aaKnown RBP eCLIP17.74■□□□□ 0.43
XRCC3-212ENST00000555231 ZNF496Q96IT1 587 aaPredicted RBP17.74■□□□□ 0.43
XRCC3-212ENST00000555231 TBC1D2BQ9UPU7 963 aa17.74■□□□□ 0.43
XRCC3-212ENST00000555231 SIPA1L3O60292 1781 aaPredicted RBP17.74■□□□□ 0.43
XRCC3-212ENST00000555231 DICER1Q9UPY3 1922 aaKnown RBP17.73■□□□□ 0.43
XRCC3-212ENST00000555231 A0A087WZG4 1122 aa17.73■□□□□ 0.43
XRCC3-212ENST00000555231 IL17REQ8NFR9 667 aa17.73■□□□□ 0.43
XRCC3-212ENST00000555231 FER1L6Q2WGJ9 1857 aa17.72■□□□□ 0.43
XRCC3-212ENST00000555231 HEG1Q9ULI3 1381 aa17.72■□□□□ 0.43
XRCC3-212ENST00000555231 U2SURPO15042 1029 aaKnown RBP17.72■□□□□ 0.43
XRCC3-212ENST00000555231 PER1O15534 1290 aaPredicted RBP17.72■□□□□ 0.43
XRCC3-212ENST00000555231 C21orf2O43822 256 aa17.72■□□□□ 0.43
XRCC3-212ENST00000555231 CAPN15O75808 1086 aa17.72■□□□□ 0.43
XRCC3-212ENST00000555231 TEFQ10587 303 aa17.72■□□□□ 0.43
XRCC3-212ENST00000555231 COL3A1P02461 1466 aaPredicted RBP17.71■□□□□ 0.43
XRCC3-212ENST00000555231 POTECB2RU33 542 aa17.71■□□□□ 0.43
XRCC3-212ENST00000555231 PRR5LQ6MZQ0 368 aa17.71■□□□□ 0.43
XRCC3-212ENST00000555231 ZNF790Q6PG37 636 aa17.71■□□□□ 0.43
XRCC3-212ENST00000555231 GNAT3A8MTJ3 354 aa17.7■□□□□ 0.42
XRCC3-212ENST00000555231 A1BGP04217 495 aa17.7■□□□□ 0.42
XRCC3-212ENST00000555231 PDE6BP35913 854 aa17.69■□□□□ 0.42
XRCC3-212ENST00000555231 BRIP1Q9BX63 1249 aa17.69■□□□□ 0.42
XRCC3-212ENST00000555231 SLX4Q8IY92 1834 aa17.69■□□□□ 0.42
XRCC3-212ENST00000555231 KCNQ3O43525 872 aa17.68■□□□□ 0.42
XRCC3-212ENST00000555231 IL6STP40189 918 aaPredicted RBP17.68■□□□□ 0.42
XRCC3-212ENST00000555231 ERFEQ4G0M1 354 aa17.68■□□□□ 0.42
XRCC3-212ENST00000555231 DPY19L2Q6NUT2 758 aa17.68■□□□□ 0.42
XRCC3-212ENST00000555231 TNS4Q8IZW8 715 aa17.68■□□□□ 0.42
XRCC3-212ENST00000555231 GAS2L2Q8NHY3 880 aa17.68■□□□□ 0.42
XRCC3-212ENST00000555231 TEX13AQ9BXU3 409 aaPredicted RBP17.68■□□□□ 0.42
XRCC3-212ENST00000555231 BCORQ6W2J9 1755 aa17.67■□□□□ 0.42
XRCC3-212ENST00000555231 HSPA1AP0DMV8 641 aaKnown RBP17.67■□□□□ 0.42
XRCC3-212ENST00000555231 HSPA1BP0DMV9 641 aaKnown RBP17.67■□□□□ 0.42
XRCC3-212ENST00000555231 FMNL2Q96PY5 1086 aa17.67■□□□□ 0.42
XRCC3-212ENST00000555231 NPHP1O15259 732 aa17.66■□□□□ 0.42
XRCC3-212ENST00000555231 CAMTA2O94983 1202 aa17.66■□□□□ 0.42
XRCC3-212ENST00000555231 PIP4K2AP48426 406 aaPredicted RBP17.66■□□□□ 0.42
XRCC3-212ENST00000555231 SETDB2Q96T68 719 aa17.66■□□□□ 0.42
XRCC3-212ENST00000555231 PDZRN3Q9UPQ7 1066 aa17.66■□□□□ 0.42
XRCC3-212ENST00000555231 NPM2Q86SE8 214 aaKnown RBP17.65■□□□□ 0.42
XRCC3-212ENST00000555231 CNBD1Q8NA66 436 aa17.65■□□□□ 0.42
XRCC3-212ENST00000555231 ARFGEF2Q9Y6D5 1785 aa17.65■□□□□ 0.42
XRCC3-212ENST00000555231 DDNO94850 711 aaPredicted RBP17.64■□□□□ 0.41
XRCC3-212ENST00000555231 DZIP3Q86Y13 1208 aaKnown RBP17.64■□□□□ 0.41
XRCC3-212ENST00000555231 TAOK3Q9H2K8 898 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms