RNA–Protein interactions for RNA: ENST00000555170.1

TRIM9-204, Transcript of tripartite motif containing 9, humanhuman

TSL 4

Gene TRIM9, Length 554 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM9-204ENST00000555170 IL17REQ8NFR9 667 aa11.18□□□□□ -0.62
TRIM9-204ENST00000555170 SMARCC1Q92922 1105 aaPredicted RBP11.18□□□□□ -0.62
TRIM9-204ENST00000555170 SLC4A9Q96Q91 983 aa11.18□□□□□ -0.62
TRIM9-204ENST00000555170 SLC52A2Q9HAB3 445 aa11.18□□□□□ -0.62
TRIM9-204ENST00000555170 RNF181Q9P0P0 153 aa11.18□□□□□ -0.62
TRIM9-204ENST00000555170 N4BP2Q86UW6 1770 aaPredicted RBP11.18□□□□□ -0.62
TRIM9-204ENST00000555170 C4AP0C0L4 1744 aa11.18□□□□□ -0.62
TRIM9-204ENST00000555170 MYH14Q7Z406 1995 aaKnown RBP11.17□□□□□ -0.62
TRIM9-204ENST00000555170 LOC102724428A0A0B4J2F2 783 aa11.17□□□□□ -0.62
TRIM9-204ENST00000555170 GNAT3A8MTJ3 354 aa11.17□□□□□ -0.62
TRIM9-204ENST00000555170 KCNA3P22001 575 aa11.17□□□□□ -0.62
TRIM9-204ENST00000555170 SSFA2P28290 1259 aa11.17□□□□□ -0.62
TRIM9-204ENST00000555170 SIK1P57059 783 aa11.17□□□□□ -0.62
TRIM9-204ENST00000555170 ITPK1Q13572 414 aa11.17□□□□□ -0.62
TRIM9-204ENST00000555170 C10orf71Q711Q0 1435 aa11.17□□□□□ -0.62
TRIM9-204ENST00000555170 KIAA1551Q9HCM1 1747 aa11.16□□□□□ -0.62
TRIM9-204ENST00000555170 FOXN1O15353 648 aa11.16□□□□□ -0.62
TRIM9-204ENST00000555170 LINC00116Q8NCU8 138 aa11.16□□□□□ -0.62
TRIM9-204ENST00000555170 SLC39A6Q13433 755 aa11.15□□□□□ -0.62
TRIM9-204ENST00000555170 DCTN1Q14203 1278 aa11.15□□□□□ -0.62
TRIM9-204ENST00000555170 MCM10Q7L590 875 aa11.15□□□□□ -0.62
TRIM9-204ENST00000555170 CCDC146Q8IYE0 955 aa11.15□□□□□ -0.62
TRIM9-204ENST00000555170 RBM42Q9BTD8 480 aaKnown RBP11.15□□□□□ -0.62
TRIM9-204ENST00000555170 MAPK8IP3Q9UPT6 1336 aa11.14□□□□□ -0.63
TRIM9-204ENST00000555170 LAMB4A4D0S4 1761 aa11.14□□□□□ -0.63
TRIM9-204ENST00000555170 GNPATO15228 680 aa11.14□□□□□ -0.63
TRIM9-204ENST00000555170 ANP32CO43423 234 aa11.14□□□□□ -0.63
TRIM9-204ENST00000555170 ATP6V1AP38606 617 aa11.14□□□□□ -0.63
TRIM9-204ENST00000555170 WDR43Q15061 677 aaKnown RBP eCLIP11.14□□□□□ -0.63
TRIM9-204ENST00000555170 NFE2L2Q16236 605 aa11.14□□□□□ -0.63
TRIM9-204ENST00000555170 PRDM10Q9NQV6 1147 aa11.14□□□□□ -0.63
TRIM9-204ENST00000555170 MKRN1Q9UHC7 482 aaKnown RBP11.14□□□□□ -0.63
TRIM9-204ENST00000555170 ADAMTS8Q9UP79 889 aa11.14□□□□□ -0.63
TRIM9-204ENST00000555170 PTCD1O75127 700 aaKnown RBP11.13□□□□□ -0.63
TRIM9-204ENST00000555170 VEGFAP15692 232 aaPredicted RBP11.13□□□□□ -0.63
TRIM9-204ENST00000555170 PIM2Q9P1W9 311 aa11.13□□□□□ -0.63
TRIM9-204ENST00000555170 KIF13BQ9NQT8 1826 aa11.12□□□□□ -0.63
TRIM9-204ENST00000555170 TEFQ10587 303 aa11.12□□□□□ -0.63
TRIM9-204ENST00000555170 NLGN1Q8N2Q7 840 aa11.12□□□□□ -0.63
TRIM9-204ENST00000555170 THUMPD2Q9BTF0 503 aaKnown RBP11.12□□□□□ -0.63
TRIM9-204ENST00000555170 CCDC87Q9NVE4 849 aa11.12□□□□□ -0.63
TRIM9-204ENST00000555170 KCNQ3O43525 872 aa11.11□□□□□ -0.63
TRIM9-204ENST00000555170 NEFMP07197 916 aa11.11□□□□□ -0.63
TRIM9-204ENST00000555170 TMPOP42166 694 aaKnown RBP11.11□□□□□ -0.63
TRIM9-204ENST00000555170 DALRD3Q5D0E6 543 aaKnown RBP11.11□□□□□ -0.63
TRIM9-204ENST00000555170 RTF1Q92541 710 aaKnown RBP11.11□□□□□ -0.63
TRIM9-204ENST00000555170 ABHD8Q96I13 439 aa11.11□□□□□ -0.63
TRIM9-204ENST00000555170 RRP7AQ9Y3A4 280 aaKnown RBP11.11□□□□□ -0.63
TRIM9-204ENST00000555170 CNTNAP4Q9C0A0 1308 aa11.1□□□□□ -0.63
TRIM9-204ENST00000555170 GLTPD2A6NH11 291 aa11.1□□□□□ -0.63
TRIM9-204ENST00000555170 HTATSF1O43719 755 aaKnown RBP11.1□□□□□ -0.63
TRIM9-204ENST00000555170 CTCFP49711 727 aaPredicted RBP11.1□□□□□ -0.63
TRIM9-204ENST00000555170 MLLT1Q03111 559 aaPredicted RBP11.1□□□□□ -0.63
TRIM9-204ENST00000555170 TRAPPC3LQ5T215 181 aa11.1□□□□□ -0.63
TRIM9-204ENST00000555170 DNAJC10Q8IXB1 793 aa11.1□□□□□ -0.63
TRIM9-204ENST00000555170 RUNDC1Q96C34 613 aa11.1□□□□□ -0.63
TRIM9-204ENST00000555170 PNNQ9H307 717 aaKnown RBP11.1□□□□□ -0.63
TRIM9-204ENST00000555170 TNRC6CQ9HCJ0 1690 aaKnown RBP11.1□□□□□ -0.63
TRIM9-204ENST00000555170 HEG1Q9ULI3 1381 aa11.09□□□□□ -0.63
TRIM9-204ENST00000555170 BTBD11A6QL63 1104 aa11.09□□□□□ -0.63
TRIM9-204ENST00000555170 POTECB2RU33 542 aa11.09□□□□□ -0.63
TRIM9-204ENST00000555170 LBX1P52954 281 aa11.09□□□□□ -0.63
TRIM9-204ENST00000555170 ZNF790Q6PG37 636 aa11.09□□□□□ -0.63
TRIM9-204ENST00000555170 ZNF496Q96IT1 587 aaPredicted RBP11.09□□□□□ -0.63
TRIM9-204ENST00000555170 MRS2Q9HD23 443 aa11.09□□□□□ -0.63
TRIM9-204ENST00000555170 PARP3Q9Y6F1 533 aa11.09□□□□□ -0.63
TRIM9-204ENST00000555170 BRCA1P38398 1863 aaKnown RBP11.08□□□□□ -0.64
TRIM9-204ENST00000555170 SCN7AQ01118 1682 aa11.08□□□□□ -0.64
TRIM9-204ENST00000555170 CHRNA5P30532 468 aa11.08□□□□□ -0.64
TRIM9-204ENST00000555170 CRKLP46109 303 aaKnown RBP11.08□□□□□ -0.64
TRIM9-204ENST00000555170 RIPK4P57078 832 aa11.08□□□□□ -0.64
TRIM9-204ENST00000555170 TTC5Q8N0Z6 440 aa11.08□□□□□ -0.64
TRIM9-204ENST00000555170 PNISRQ8TF01 805 aaKnown RBP11.08□□□□□ -0.64
TRIM9-204ENST00000555170 ARHGEF1Q92888 912 aaKnown RBP11.08□□□□□ -0.64
TRIM9-204ENST00000555170 CREBZFQ9NS37 354 aa11.08□□□□□ -0.64
TRIM9-204ENST00000555170 BCORQ6W2J9 1755 aa11.08□□□□□ -0.64
TRIM9-204ENST00000555170 GYS1P13807 737 aa11.07□□□□□ -0.64
TRIM9-204ENST00000555170 RGS19P49795 217 aa11.07□□□□□ -0.64
TRIM9-204ENST00000555170 RASSF7Q02833 373 aa11.07□□□□□ -0.64
TRIM9-204ENST00000555170 NEUROD2Q15784 382 aa11.07□□□□□ -0.64
TRIM9-204ENST00000555170 AIDAQ96BJ3 306 aa11.07□□□□□ -0.64
TRIM9-204ENST00000555170 MIS18AQ9NYP9 233 aa11.07□□□□□ -0.64
TRIM9-204ENST00000555170 TRIM35Q9UPQ4 493 aa11.07□□□□□ -0.64
TRIM9-204ENST00000555170 ARFGEF1Q9Y6D6 1849 aa11.07□□□□□ -0.64
TRIM9-204ENST00000555170 SBF1O95248 1867 aa11.06□□□□□ -0.64
TRIM9-204ENST00000555170 PRAMEF22A3QJZ6 481 aa11.06□□□□□ -0.64
TRIM9-204ENST00000555170 CCDC85CA6NKD9 419 aa11.06□□□□□ -0.64
TRIM9-204ENST00000555170 CYP19A1P11511 503 aaPredicted RBP11.06□□□□□ -0.64
TRIM9-204ENST00000555170 RC3H1Q5TC82 1133 aaKnown RBP11.06□□□□□ -0.64
TRIM9-204ENST00000555170 INTS5Q6P9B9 1019 aaKnown RBP11.06□□□□□ -0.64
TRIM9-204ENST00000555170 VSIG10Q8N0Z9 540 aa11.06□□□□□ -0.64
TRIM9-204ENST00000555170 ZBTB1Q9Y2K1 713 aa11.06□□□□□ -0.64
TRIM9-204ENST00000555170 RTCBQ9Y3I0 505 aaKnown RBP11.06□□□□□ -0.64
TRIM9-204ENST00000555170 APAF1O14727 1248 aa11.05□□□□□ -0.64
TRIM9-204ENST00000555170 RPS6KA4O75676 772 aa11.05□□□□□ -0.64
TRIM9-204ENST00000555170 VEGFBP49765 207 aa11.05□□□□□ -0.64
TRIM9-204ENST00000555170 TAF7Q15545 349 aaPredicted RBP11.05□□□□□ -0.64
TRIM9-204ENST00000555170 FMNL2Q96PY5 1086 aa11.05□□□□□ -0.64
TRIM9-204ENST00000555170 WBP1LQ9NX94 342 aa11.05□□□□□ -0.64
TRIM9-204ENST00000555170 SOS1Q07889 1333 aaPredicted RBP11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms