RNA–Protein interactions for RNA: ENST00000555046.1

TMEM260-206, Transcript of transmembrane protein 260, humanhuman

TSL 3

Gene TMEM260, Length 618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-206ENST00000555046 POLD1P28340 1107 aa13.86□□□□□ -0.19
TMEM260-206ENST00000555046 DCTN1Q14203 1278 aa13.86□□□□□ -0.19
TMEM260-206ENST00000555046 RC3H1Q5TC82 1133 aaKnown RBP13.86□□□□□ -0.19
TMEM260-206ENST00000555046 FAM9BQ8IZU0 186 aa13.86□□□□□ -0.19
TMEM260-206ENST00000555046 AK7Q96M32 723 aa13.86□□□□□ -0.19
TMEM260-206ENST00000555046 FMNL2Q96PY5 1086 aa13.86□□□□□ -0.19
TMEM260-206ENST00000555046 SLC39A6Q13433 755 aa13.85□□□□□ -0.19
TMEM260-206ENST00000555046 AKT1S1Q96B36 256 aa13.85□□□□□ -0.19
TMEM260-206ENST00000555046 KCNQ4P56696 695 aa13.84□□□□□ -0.19
TMEM260-206ENST00000555046 SLC16A10Q8TF71 515 aa13.84□□□□□ -0.19
TMEM260-206ENST00000555046 RRP7AQ9Y3A4 280 aaKnown RBP13.84□□□□□ -0.19
TMEM260-206ENST00000555046 BTAF1O14981 1849 aa13.84□□□□□ -0.19
TMEM260-206ENST00000555046 CICQ96RK0 1608 aaPredicted RBP13.83□□□□□ -0.2
TMEM260-206ENST00000555046 SNRPA1P09661 255 aaKnown RBP13.83□□□□□ -0.2
TMEM260-206ENST00000555046 CCDC27Q2M243 656 aa13.83□□□□□ -0.2
TMEM260-206ENST00000555046 NPM2Q86SE8 214 aaKnown RBP13.83□□□□□ -0.2
TMEM260-206ENST00000555046 CHMP4AQ9BY43 222 aa13.82□□□□□ -0.2
TMEM260-206ENST00000555046 TSPYL4Q9UJ04 414 aa13.82□□□□□ -0.2
TMEM260-206ENST00000555046 RTCBQ9Y3I0 505 aaKnown RBP13.82□□□□□ -0.2
TMEM260-206ENST00000555046 PDE4DIPQ5VU43 2346 aa13.82□□□□□ -0.2
TMEM260-206ENST00000555046 SSFA2P28290 1259 aa13.81□□□□□ -0.2
TMEM260-206ENST00000555046 ITPK1Q13572 414 aa13.81□□□□□ -0.2
TMEM260-206ENST00000555046 TRAPPC3LQ5T215 181 aa13.81□□□□□ -0.2
TMEM260-206ENST00000555046 ZNF496Q96IT1 587 aaPredicted RBP13.81□□□□□ -0.2
TMEM260-206ENST00000555046 TRIM35Q9UPQ4 493 aa13.81□□□□□ -0.2
TMEM260-206ENST00000555046 CHL1O00533 1208 aa13.8□□□□□ -0.2
TMEM260-206ENST00000555046 RPS6KA4O75676 772 aa13.8□□□□□ -0.2
TMEM260-206ENST00000555046 GNAI1P63096 354 aa13.8□□□□□ -0.2
TMEM260-206ENST00000555046 LINC00116Q8NCU8 138 aa13.8□□□□□ -0.2
TMEM260-206ENST00000555046 CFAP44Q96MT7 982 aa13.8□□□□□ -0.2
TMEM260-206ENST00000555046 SLC4A9Q96Q91 983 aa13.8□□□□□ -0.2
TMEM260-206ENST00000555046 THUMPD2Q9BTF0 503 aaKnown RBP13.8□□□□□ -0.2
TMEM260-206ENST00000555046 CNTNAP4Q9C0A0 1308 aa13.8□□□□□ -0.2
TMEM260-206ENST00000555046 GNPATO15228 680 aa13.79□□□□□ -0.2
TMEM260-206ENST00000555046 DNAJC10Q8IXB1 793 aa13.79□□□□□ -0.2
TMEM260-206ENST00000555046 MIER1Q8N108 512 aa13.79□□□□□ -0.2
TMEM260-206ENST00000555046 MIS18AQ9NYP9 233 aa13.79□□□□□ -0.2
TMEM260-206ENST00000555046 LAS1LQ9Y4W2 734 aaKnown RBP13.79□□□□□ -0.2
TMEM260-206ENST00000555046 HEG1Q9ULI3 1381 aa13.79□□□□□ -0.2
TMEM260-206ENST00000555046 MRC1P22897 1456 aa13.79□□□□□ -0.2
TMEM260-206ENST00000555046 CYP19A1P11511 503 aaPredicted RBP13.78□□□□□ -0.2
TMEM260-206ENST00000555046 CRKLP46109 303 aaKnown RBP13.78□□□□□ -0.2
TMEM260-206ENST00000555046 WDR63Q8IWG1 891 aa13.78□□□□□ -0.2
TMEM260-206ENST00000555046 CCDC87Q9NVE4 849 aa13.78□□□□□ -0.2
TMEM260-206ENST00000555046 IFT57Q9NWB7 429 aa13.78□□□□□ -0.2
TMEM260-206ENST00000555046 PNPLA7Q6ZV29 1317 aa13.78□□□□□ -0.2
TMEM260-206ENST00000555046 DOT1LQ8TEK3 1739 aa13.78□□□□□ -0.2
TMEM260-206ENST00000555046 TNRC18O15417 2968 aaPredicted RBP13.77□□□□□ -0.2
TMEM260-206ENST00000555046 A0A087WZG4 1122 aa13.77□□□□□ -0.21
TMEM260-206ENST00000555046 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.77□□□□□ -0.21
TMEM260-206ENST00000555046 KCNQ3O43525 872 aa13.77□□□□□ -0.21
TMEM260-206ENST00000555046 RFC4P35249 363 aa13.77□□□□□ -0.21
TMEM260-206ENST00000555046 EIF4A1P60842 406 aaKnown RBP13.77□□□□□ -0.21
TMEM260-206ENST00000555046 WWC1Q8IX03 1113 aa13.77□□□□□ -0.21
TMEM260-206ENST00000555046 RBM46Q8TBY0 533 aaKnown RBP13.77□□□□□ -0.21
TMEM260-206ENST00000555046 PPP4R3CPQ6ZMV5 832 aa13.76□□□□□ -0.21
TMEM260-206ENST00000555046 COL23A1Q86Y22 540 aaPredicted RBP13.76□□□□□ -0.21
TMEM260-206ENST00000555046 NMRK2Q9NPI5 230 aa13.76□□□□□ -0.21
TMEM260-206ENST00000555046 IL16Q14005 1332 aa13.75□□□□□ -0.21
TMEM260-206ENST00000555046 PHF14O94880 888 aa13.75□□□□□ -0.21
TMEM260-206ENST00000555046 INTS5Q6P9B9 1019 aaKnown RBP13.75□□□□□ -0.21
TMEM260-206ENST00000555046 ZPR1O75312 459 aa13.74□□□□□ -0.21
TMEM260-206ENST00000555046 ZNF853P0CG23 659 aa13.74□□□□□ -0.21
TMEM260-206ENST00000555046 IL6STP40189 918 aaPredicted RBP13.74□□□□□ -0.21
TMEM260-206ENST00000555046 NLGN1Q8N2Q7 840 aa13.74□□□□□ -0.21
TMEM260-206ENST00000555046 ARHGEF1Q92888 912 aaKnown RBP13.74□□□□□ -0.21
TMEM260-206ENST00000555046 USP16Q9Y5T5 823 aa13.74□□□□□ -0.21
TMEM260-206ENST00000555046 HOXB7P09629 217 aa13.73□□□□□ -0.21
TMEM260-206ENST00000555046 CANXP27824 592 aaKnown RBP13.73□□□□□ -0.21
TMEM260-206ENST00000555046 SALL2Q9Y467 1007 aaPredicted RBP13.73□□□□□ -0.21
TMEM260-206ENST00000555046 TOGARAM1Q9Y4F4 1720 aa13.73□□□□□ -0.21
TMEM260-206ENST00000555046 ADAMTS7Q9UKP4 1686 aa13.72□□□□□ -0.21
TMEM260-206ENST00000555046 SOS1Q07889 1333 aaPredicted RBP13.72□□□□□ -0.21
TMEM260-206ENST00000555046 ITGB4P16144 1822 aa13.72□□□□□ -0.21
TMEM260-206ENST00000555046 MYH16Q9H6N6 1097 aa13.72□□□□□ -0.21
TMEM260-206ENST00000555046 MBIPQ9NS73 344 aa13.72□□□□□ -0.21
TMEM260-206ENST00000555046 SCN11AQ9UI33 1791 aa13.72□□□□□ -0.21
TMEM260-206ENST00000555046 ERBB4Q15303 1308 aa13.71□□□□□ -0.21
TMEM260-206ENST00000555046 A1BGP04217 495 aa13.71□□□□□ -0.21
TMEM260-206ENST00000555046 EIF5P55010 431 aaKnown RBP13.71□□□□□ -0.21
TMEM260-206ENST00000555046 GOLGA2Q08379 1002 aa13.71□□□□□ -0.21
TMEM260-206ENST00000555046 FSTL1Q12841 308 aa13.71□□□□□ -0.21
TMEM260-206ENST00000555046 ZBTB1Q9Y2K1 713 aa13.7□□□□□ -0.22
TMEM260-206ENST00000555046 RGL2O15211 777 aa13.69□□□□□ -0.22
TMEM260-206ENST00000555046 EIF2S2P20042 333 aaKnown RBP13.69□□□□□ -0.22
TMEM260-206ENST00000555046 DUSP27Q5VZP5 1158 aa13.69□□□□□ -0.22
TMEM260-206ENST00000555046 NARFQ9UHQ1 456 aa13.69□□□□□ -0.22
TMEM260-206ENST00000555046 LY75O60449 1722 aa13.69□□□□□ -0.22
TMEM260-206ENST00000555046 KCPQ6ZWJ8 1503 aa13.69□□□□□ -0.22
TMEM260-206ENST00000555046 RNF216Q9NWF9 866 aaPredicted RBP13.68□□□□□ -0.22
TMEM260-206ENST00000555046 ZNF330Q9Y3S2 320 aaPredicted RBP13.68□□□□□ -0.22
TMEM260-206ENST00000555046 CD2APQ9Y5K6 639 aa13.68□□□□□ -0.22
TMEM260-206ENST00000555046 TNRC6CQ9HCJ0 1690 aaKnown RBP13.68□□□□□ -0.22
TMEM260-206ENST00000555046 PRAMEF22A3QJZ6 481 aa13.67□□□□□ -0.22
TMEM260-206ENST00000555046 MLLT1Q03111 559 aaPredicted RBP13.67□□□□□ -0.22
TMEM260-206ENST00000555046 HDGFL1Q5TGJ6 251 aa13.67□□□□□ -0.22
TMEM260-206ENST00000555046 CLEC4GQ6UXB4 293 aa13.67□□□□□ -0.22
TMEM260-206ENST00000555046 DBF4Q9UBU7 674 aaPredicted RBP13.67□□□□□ -0.22
TMEM260-206ENST00000555046 ZNF652Q9Y2D9 606 aa13.67□□□□□ -0.22
TMEM260-206ENST00000555046 USP42Q9H9J4 1324 aaKnown RBP13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 119.2 ms