RNA–Protein interactions for RNA: ENST00000554945.1

SRP54-AS1-201, Transcript of SRP54 antisense RNA 1 (head to head), humanhuman

TSL 3

Gene SRP54-AS1, Length 600 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-AS1-201ENST00000554945 CLEC11AQ9Y240 323 aa12.8□□□□□ -0.36
SRP54-AS1-201ENST00000554945 ARFGEF1Q9Y6D6 1849 aa12.8□□□□□ -0.36
SRP54-AS1-201ENST00000554945 TJP1Q07157 1748 aa12.79□□□□□ -0.36
SRP54-AS1-201ENST00000554945 VIRMAQ69YN4 1812 aaKnown RBP12.79□□□□□ -0.36
SRP54-AS1-201ENST00000554945 FCHSD2O94868 740 aa12.79□□□□□ -0.36
SRP54-AS1-201ENST00000554945 AKAP4Q5JQC9 854 aa12.79□□□□□ -0.36
SRP54-AS1-201ENST00000554945 KCNA3P22001 575 aa12.78□□□□□ -0.36
SRP54-AS1-201ENST00000554945 PIM2Q9P1W9 311 aa12.78□□□□□ -0.36
SRP54-AS1-201ENST00000554945 USP42Q9H9J4 1324 aaKnown RBP12.78□□□□□ -0.36
SRP54-AS1-201ENST00000554945 FKBP8Q14318 412 aa12.77□□□□□ -0.37
SRP54-AS1-201ENST00000554945 AMER1Q5JTC6 1135 aaPredicted RBP12.77□□□□□ -0.37
SRP54-AS1-201ENST00000554945 INTS5Q6P9B9 1019 aaKnown RBP12.77□□□□□ -0.37
SRP54-AS1-201ENST00000554945 CCER1Q8TC90 406 aaPredicted RBP12.77□□□□□ -0.37
SRP54-AS1-201ENST00000554945 SLC52A2Q9HAB3 445 aa12.77□□□□□ -0.37
SRP54-AS1-201ENST00000554945 SRP68Q9UHB9 627 aaKnown RBP12.77□□□□□ -0.37
SRP54-AS1-201ENST00000554945 C19orf67A6NJJ6 358 aa12.76□□□□□ -0.37
SRP54-AS1-201ENST00000554945 ZBTB22O15209 634 aa12.76□□□□□ -0.37
SRP54-AS1-201ENST00000554945 TOMM70O94826 608 aa12.76□□□□□ -0.37
SRP54-AS1-201ENST00000554945 IFFO2Q5TF58 517 aa12.76□□□□□ -0.37
SRP54-AS1-201ENST00000554945 SPDYE1Q8NFV5 336 aaPredicted RBP12.76□□□□□ -0.37
SRP54-AS1-201ENST00000554945 LGR6Q9HBX8 967 aa12.76□□□□□ -0.37
SRP54-AS1-201ENST00000554945 ADAMTS7Q9UKP4 1686 aa12.76□□□□□ -0.37
SRP54-AS1-201ENST00000554945 ZPR1O75312 459 aa12.75□□□□□ -0.37
SRP54-AS1-201ENST00000554945 TM4SF1P30408 202 aa12.75□□□□□ -0.37
SRP54-AS1-201ENST00000554945 DALRD3Q5D0E6 543 aaKnown RBP12.75□□□□□ -0.37
SRP54-AS1-201ENST00000554945 DNAJC10Q8IXB1 793 aa12.75□□□□□ -0.37
SRP54-AS1-201ENST00000554945 RNMTO43148 476 aaKnown RBP12.74□□□□□ -0.37
SRP54-AS1-201ENST00000554945 APLP1P51693 650 aa12.74□□□□□ -0.37
SRP54-AS1-201ENST00000554945 DDR1Q08345 913 aa12.74□□□□□ -0.37
SRP54-AS1-201ENST00000554945 C9orf131Q5VYM1 1079 aa12.74□□□□□ -0.37
SRP54-AS1-201ENST00000554945 MRC1P22897 1456 aa12.73□□□□□ -0.37
SRP54-AS1-201ENST00000554945 SOS1Q07889 1333 aaPredicted RBP12.73□□□□□ -0.37
SRP54-AS1-201ENST00000554945 POLRMTO00411 1230 aaKnown RBP12.73□□□□□ -0.37
SRP54-AS1-201ENST00000554945 HMOX1P09601 288 aa12.73□□□□□ -0.37
SRP54-AS1-201ENST00000554945 CYP19A1P11511 503 aaPredicted RBP12.73□□□□□ -0.37
SRP54-AS1-201ENST00000554945 USPL1Q5W0Q7 1092 aa12.73□□□□□ -0.37
SRP54-AS1-201ENST00000554945 VSIG10Q8N0Z9 540 aa12.73□□□□□ -0.37
SRP54-AS1-201ENST00000554945 SBF1O95248 1867 aa12.73□□□□□ -0.37
SRP54-AS1-201ENST00000554945 AFDNP55196 1824 aaKnown RBP12.72□□□□□ -0.37
SRP54-AS1-201ENST00000554945 KIF7Q2M1P5 1343 aa12.72□□□□□ -0.37
SRP54-AS1-201ENST00000554945 DIAPH1O60610 1272 aaKnown RBP12.72□□□□□ -0.37
SRP54-AS1-201ENST00000554945 GABBR2O75899 941 aa12.72□□□□□ -0.37
SRP54-AS1-201ENST00000554945 SLC39A6Q13433 755 aa12.72□□□□□ -0.37
SRP54-AS1-201ENST00000554945 MTHFSDQ2M296 383 aaKnown RBP12.72□□□□□ -0.37
SRP54-AS1-201ENST00000554945 NMRK2Q9NPI5 230 aa12.72□□□□□ -0.37
SRP54-AS1-201ENST00000554945 NARFQ9UHQ1 456 aa12.72□□□□□ -0.37
SRP54-AS1-201ENST00000554945 PER1O15534 1290 aaPredicted RBP12.71□□□□□ -0.37
SRP54-AS1-201ENST00000554945 CHRNA5P30532 468 aa12.71□□□□□ -0.37
SRP54-AS1-201ENST00000554945 KCPQ6ZWJ8 1503 aa12.71□□□□□ -0.38
SRP54-AS1-201ENST00000554945 NRXN2Q9P2S2 1712 aa12.71□□□□□ -0.38
SRP54-AS1-201ENST00000554945 COL15A1P39059 1388 aa12.7□□□□□ -0.38
SRP54-AS1-201ENST00000554945 KDM2BQ8NHM5 1336 aa12.7□□□□□ -0.38
SRP54-AS1-201ENST00000554945 ATXN8OSP0DMR3 200 aa12.7□□□□□ -0.38
SRP54-AS1-201ENST00000554945 C16orf71Q8IYS4 520 aaPredicted RBP12.7□□□□□ -0.38
SRP54-AS1-201ENST00000554945 RBM46Q8TBY0 533 aaKnown RBP12.7□□□□□ -0.38
SRP54-AS1-201ENST00000554945 RNF181Q9P0P0 153 aa12.7□□□□□ -0.38
SRP54-AS1-201ENST00000554945 ZBTB1Q9Y2K1 713 aa12.7□□□□□ -0.38
SRP54-AS1-201ENST00000554945 UBR2Q8IWV8 1755 aa12.7□□□□□ -0.38
SRP54-AS1-201ENST00000554945 NFIXQ14938 502 aa12.69□□□□□ -0.38
SRP54-AS1-201ENST00000554945 CC2D1BQ5T0F9 858 aaKnown RBP12.69□□□□□ -0.38
SRP54-AS1-201ENST00000554945 LHX8Q68G74 356 aa12.69□□□□□ -0.38
SRP54-AS1-201ENST00000554945 STARD3NLO95772 234 aa12.68□□□□□ -0.38
SRP54-AS1-201ENST00000554945 SERPINB2P05120 415 aa12.68□□□□□ -0.38
SRP54-AS1-201ENST00000554945 FSTL1Q12841 308 aa12.68□□□□□ -0.38
SRP54-AS1-201ENST00000554945 TTC5Q8N0Z6 440 aa12.68□□□□□ -0.38
SRP54-AS1-201ENST00000554945 DNAJC5GQ8N7S2 189 aa12.68□□□□□ -0.38
SRP54-AS1-201ENST00000554945 BCL2L12Q9HB09 334 aa12.68□□□□□ -0.38
SRP54-AS1-201ENST00000554945 DLEC1Q9Y238 1755 aa12.68□□□□□ -0.38
SRP54-AS1-201ENST00000554945 TNRC6CQ9HCJ0 1690 aaKnown RBP12.67□□□□□ -0.38
SRP54-AS1-201ENST00000554945 CANXP27824 592 aaKnown RBP12.67□□□□□ -0.38
SRP54-AS1-201ENST00000554945 RRAGCQ9HB90 399 aa12.67□□□□□ -0.38
SRP54-AS1-201ENST00000554945 WDR90Q96KV7 1748 aa12.67□□□□□ -0.38
SRP54-AS1-201ENST00000554945 ZC3H4Q9UPT8 1303 aaKnown RBP12.66□□□□□ -0.38
SRP54-AS1-201ENST00000554945 CCDC88AQ3V6T2 1871 aa12.66□□□□□ -0.38
SRP54-AS1-201ENST00000554945 A0A087WZG4 1122 aa12.66□□□□□ -0.38
SRP54-AS1-201ENST00000554945 GNAT3A8MTJ3 354 aa12.66□□□□□ -0.38
SRP54-AS1-201ENST00000554945 EIF5P55010 431 aaKnown RBP12.66□□□□□ -0.38
SRP54-AS1-201ENST00000554945 TEFQ10587 303 aa12.66□□□□□ -0.38
SRP54-AS1-201ENST00000554945 TTLL6Q8N841 843 aa12.66□□□□□ -0.38
SRP54-AS1-201ENST00000554945 GAS2L2Q8NHY3 880 aa12.66□□□□□ -0.38
SRP54-AS1-201ENST00000554945 TEX13AQ9BXU3 409 aaPredicted RBP12.66□□□□□ -0.38
SRP54-AS1-201ENST00000554945 NPC1L1Q9UHC9 1359 aa12.66□□□□□ -0.38
SRP54-AS1-201ENST00000554945 H0YIN7 160 aa12.65□□□□□ -0.38
SRP54-AS1-201ENST00000554945 U2SURPO15042 1029 aaKnown RBP12.65□□□□□ -0.38
SRP54-AS1-201ENST00000554945 ZNF790Q6PG37 636 aa12.65□□□□□ -0.38
SRP54-AS1-201ENST00000554945 SIPA1L3O60292 1781 aaPredicted RBP12.65□□□□□ -0.38
SRP54-AS1-201ENST00000554945 LMNB1P20700 586 aa12.64□□□□□ -0.39
SRP54-AS1-201ENST00000554945 RASSF7Q02833 373 aa12.64□□□□□ -0.39
SRP54-AS1-201ENST00000554945 C2CD5Q86YS7 1000 aa12.64□□□□□ -0.39
SRP54-AS1-201ENST00000554945 IL17REQ8NFR9 667 aa12.64□□□□□ -0.39
SRP54-AS1-201ENST00000554945 PDZRN3Q9UPQ7 1066 aa12.64□□□□□ -0.39
SRP54-AS1-201ENST00000554945 HEG1Q9ULI3 1381 aa12.64□□□□□ -0.39
SRP54-AS1-201ENST00000554945 COL3A1P02461 1466 aaPredicted RBP12.64□□□□□ -0.39
SRP54-AS1-201ENST00000554945 MKRN4PQ13434 485 aaPredicted RBP12.63□□□□□ -0.39
SRP54-AS1-201ENST00000554945 BICDL1Q6ZP65 573 aa12.63□□□□□ -0.39
SRP54-AS1-201ENST00000554945 ZNF496Q96IT1 587 aaPredicted RBP12.63□□□□□ -0.39
SRP54-AS1-201ENST00000554945 GLTPD2A6NH11 291 aa12.62□□□□□ -0.39
SRP54-AS1-201ENST00000554945 PDE6BP35913 854 aa12.62□□□□□ -0.39
SRP54-AS1-201ENST00000554945 IL6STP40189 918 aaPredicted RBP12.62□□□□□ -0.39
SRP54-AS1-201ENST00000554945 TBC1D9BQ66K14 1250 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms