RNA–Protein interactions for RNA: ENST00000554835.1

PRKCH-210, Transcript of protein kinase C eta, humanhuman

TSL 3

Gene PRKCH, Length 363 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-210ENST00000554835 BCL2L12Q9HB09 334 aa24.61■■□□□ 1.53
PRKCH-210ENST00000554835 AFDNP55196 1824 aaKnown RBP24.61■■□□□ 1.53
PRKCH-210ENST00000554835 COL15A1P39059 1388 aa24.6■■□□□ 1.53
PRKCH-210ENST00000554835 DALRD3Q5D0E6 543 aaKnown RBP24.6■■□□□ 1.53
PRKCH-210ENST00000554835 C9orf131Q5VYM1 1079 aa24.6■■□□□ 1.53
PRKCH-210ENST00000554835 NMRK2Q9NPI5 230 aa24.6■■□□□ 1.53
PRKCH-210ENST00000554835 NARFQ9UHQ1 456 aa24.6■■□□□ 1.53
PRKCH-210ENST00000554835 NFIXQ14938 502 aa24.59■■□□□ 1.53
PRKCH-210ENST00000554835 NRXN2Q9P2S2 1712 aa24.58■■□□□ 1.53
PRKCH-210ENST00000554835 NPC1L1Q9UHC9 1359 aa24.58■■□□□ 1.53
PRKCH-210ENST00000554835 VSIG10Q8N0Z9 540 aa24.58■■□□□ 1.53
PRKCH-210ENST00000554835 CNGB1Q14028 1251 aaPredicted RBP24.56■■□□□ 1.52
PRKCH-210ENST00000554835 IL17REQ8NFR9 667 aa24.56■■□□□ 1.52
PRKCH-210ENST00000554835 SBF1O95248 1867 aa24.55■■□□□ 1.52
PRKCH-210ENST00000554835 TOMM70O94826 608 aa24.55■■□□□ 1.52
PRKCH-210ENST00000554835 SIPA1L3O60292 1781 aaPredicted RBP24.54■■□□□ 1.52
PRKCH-210ENST00000554835 U2SURPO15042 1029 aaKnown RBP24.53■■□□□ 1.52
PRKCH-210ENST00000554835 CANXP27824 592 aaKnown RBP24.53■■□□□ 1.52
PRKCH-210ENST00000554835 ZNF496Q96IT1 587 aaPredicted RBP24.53■■□□□ 1.52
PRKCH-210ENST00000554835 EIF5P55010 431 aaKnown RBP24.52■■□□□ 1.52
PRKCH-210ENST00000554835 SERPINB2P05120 415 aa24.51■■□□□ 1.51
PRKCH-210ENST00000554835 RNF181Q9P0P0 153 aa24.51■■□□□ 1.51
PRKCH-210ENST00000554835 CARMIL3Q8ND23 1372 aa24.51■■□□□ 1.51
PRKCH-210ENST00000554835 DLEC1Q9Y238 1755 aa24.5■■□□□ 1.51
PRKCH-210ENST00000554835 GNAT3A8MTJ3 354 aa24.5■■□□□ 1.51
PRKCH-210ENST00000554835 ZNF790Q6PG37 636 aa24.5■■□□□ 1.51
PRKCH-210ENST00000554835 TTC5Q8N0Z6 440 aa24.49■■□□□ 1.51
PRKCH-210ENST00000554835 HEG1Q9ULI3 1381 aa24.49■■□□□ 1.51
PRKCH-210ENST00000554835 STARD3NLO95772 234 aa24.48■■□□□ 1.51
PRKCH-210ENST00000554835 PRELPP51888 382 aa24.48■■□□□ 1.51
PRKCH-210ENST00000554835 RASSF7Q02833 373 aa24.48■■□□□ 1.51
PRKCH-210ENST00000554835 GAS2L2Q8NHY3 880 aa24.48■■□□□ 1.51
PRKCH-210ENST00000554835 PHACTR3Q96KR7 559 aa24.48■■□□□ 1.51
PRKCH-210ENST00000554835 CEMIPQ8WUJ3 1361 aa24.47■■□□□ 1.51
PRKCH-210ENST00000554835 APLP1P51693 650 aa24.47■■□□□ 1.51
PRKCH-210ENST00000554835 TEFQ10587 303 aa24.47■■□□□ 1.51
PRKCH-210ENST00000554835 IFFO2Q5TF58 517 aa24.47■■□□□ 1.51
PRKCH-210ENST00000554835 DNAJC5GQ8N7S2 189 aa24.47■■□□□ 1.51
PRKCH-210ENST00000554835 BICDL1Q6ZP65 573 aa24.46■■□□□ 1.51
PRKCH-210ENST00000554835 KCNQ3O43525 872 aa24.45■■□□□ 1.5
PRKCH-210ENST00000554835 TBC1D9BQ66K14 1250 aa24.45■■□□□ 1.5
PRKCH-210ENST00000554835 RBM46Q8TBY0 533 aaKnown RBP24.45■■□□□ 1.5
PRKCH-210ENST00000554835 RSPH6AQ9H0K4 717 aa24.45■■□□□ 1.5
PRKCH-210ENST00000554835 ANKRD31Q8N7Z5 1873 aa24.45■■□□□ 1.5
PRKCH-210ENST00000554835 SCN7AQ01118 1682 aa24.44■■□□□ 1.5
PRKCH-210ENST00000554835 C2CD5Q86YS7 1000 aa24.44■■□□□ 1.5
PRKCH-210ENST00000554835 RRAGCQ9HB90 399 aa24.44■■□□□ 1.5
PRKCH-210ENST00000554835 PCNTO95613 3336 aa24.43■■□□□ 1.5
PRKCH-210ENST00000554835 PRKAR2BP31323 418 aa24.43■■□□□ 1.5
PRKCH-210ENST00000554835 TBC1D2BQ9UPU7 963 aa24.43■■□□□ 1.5
PRKCH-210ENST00000554835 KDM2BQ8NHM5 1336 aa24.42■■□□□ 1.5
PRKCH-210ENST00000554835 A0A087WZG4 1122 aa24.42■■□□□ 1.5
PRKCH-210ENST00000554835 A1BGP04217 495 aa24.42■■□□□ 1.5
PRKCH-210ENST00000554835 TTLL6Q8N841 843 aa24.42■■□□□ 1.5
PRKCH-210ENST00000554835 TNRC6CQ9HCJ0 1690 aaKnown RBP24.41■■□□□ 1.5
PRKCH-210ENST00000554835 FMNL2Q96PY5 1086 aa24.41■■□□□ 1.5
PRKCH-210ENST00000554835 TEX13AQ9BXU3 409 aaPredicted RBP24.41■■□□□ 1.5
PRKCH-210ENST00000554835 ZNF330Q9Y3S2 320 aaPredicted RBP24.41■■□□□ 1.5
PRKCH-210ENST00000554835 H0YIN7 160 aa24.4■■□□□ 1.5
PRKCH-210ENST00000554835 IL6STP40189 918 aaPredicted RBP24.4■■□□□ 1.5
PRKCH-210ENST00000554835 CCDC24Q8N4L8 307 aa24.4■■□□□ 1.5
PRKCH-210ENST00000554835 WDR90Q96KV7 1748 aa24.4■■□□□ 1.5
PRKCH-210ENST00000554835 CCDC88AQ3V6T2 1871 aa24.4■■□□□ 1.5
PRKCH-210ENST00000554835 COL11A2P13942 1736 aaPredicted RBP24.39■■□□□ 1.5
PRKCH-210ENST00000554835 NFKBIEO00221 500 aa24.39■■□□□ 1.49
PRKCH-210ENST00000554835 LMNB1P20700 586 aa24.39■■□□□ 1.49
PRKCH-210ENST00000554835 HTRA3P83110 453 aa24.39■■□□□ 1.49
PRKCH-210ENST00000554835 PRR5LQ6MZQ0 368 aa24.39■■□□□ 1.49
PRKCH-210ENST00000554835 BTBD11A6QL63 1104 aa24.38■■□□□ 1.49
PRKCH-210ENST00000554835 CAMTA2O94983 1202 aa24.38■■□□□ 1.49
PRKCH-210ENST00000554835 C16orf71Q8IYS4 520 aaPredicted RBP24.38■■□□□ 1.49
PRKCH-210ENST00000554835 ZC3H4Q9UPT8 1303 aaKnown RBP24.37■■□□□ 1.49
PRKCH-210ENST00000554835 PRAMEF22A3QJZ6 481 aa24.37■■□□□ 1.49
PRKCH-210ENST00000554835 FSTL1Q12841 308 aa24.37■■□□□ 1.49
PRKCH-210ENST00000554835 USP16Q9Y5T5 823 aa24.37■■□□□ 1.49
PRKCH-210ENST00000554835 PPP2R1AP30153 589 aa24.36■■□□□ 1.49
PRKCH-210ENST00000554835 PIP4K2AP48426 406 aaPredicted RBP24.36■■□□□ 1.49
PRKCH-210ENST00000554835 CFAP53Q96M91 514 aa24.36■■□□□ 1.49
PRKCH-210ENST00000554835 BRIP1Q9BX63 1249 aa24.36■■□□□ 1.49
PRKCH-210ENST00000554835 BCORQ6W2J9 1755 aa24.35■■□□□ 1.49
PRKCH-210ENST00000554835 TIAM2Q8IVF5 1701 aa24.35■■□□□ 1.49
PRKCH-210ENST00000554835 GLTPD2A6NH11 291 aa24.34■■□□□ 1.49
PRKCH-210ENST00000554835 MCM10Q7L590 875 aa24.34■■□□□ 1.49
PRKCH-210ENST00000554835 ZNF622Q969S3 477 aaKnown RBP eCLIP24.33■■□□□ 1.49
PRKCH-210ENST00000554835 FER1L6Q2WGJ9 1857 aa24.32■■□□□ 1.48
PRKCH-210ENST00000554835 U2AF1L5P0DN76 240 aaPredicted RBP24.32■■□□□ 1.48
PRKCH-210ENST00000554835 PDE6BP35913 854 aa24.32■■□□□ 1.48
PRKCH-210ENST00000554835 U2AF1Q01081 240 aaKnown RBP eCLIP24.32■■□□□ 1.48
PRKCH-210ENST00000554835 SETDB2Q96T68 719 aa24.32■■□□□ 1.48
PRKCH-210ENST00000554835 C21orf2O43822 256 aa24.31■■□□□ 1.48
PRKCH-210ENST00000554835 DCTN1Q14203 1278 aa24.31■■□□□ 1.48
PRKCH-210ENST00000554835 DZIP3Q86Y13 1208 aaKnown RBP24.31■■□□□ 1.48
PRKCH-210ENST00000554835 ZNF219Q9P2Y4 722 aaPredicted RBP24.31■■□□□ 1.48
PRKCH-210ENST00000554835 NUDCQ9Y266 331 aa24.31■■□□□ 1.48
PRKCH-210ENST00000554835 CNBD1Q8NA66 436 aa24.3■■□□□ 1.48
PRKCH-210ENST00000554835 PDZRN3Q9UPQ7 1066 aa24.3■■□□□ 1.48
PRKCH-210ENST00000554835 SLX4Q8IY92 1834 aa24.3■■□□□ 1.48
PRKCH-210ENST00000554835 POTECB2RU33 542 aa24.29■■□□□ 1.48
PRKCH-210ENST00000554835 SMC1BQ8NDV3 1235 aa24.29■■□□□ 1.48
PRKCH-210ENST00000554835 KLRG1Q96E93 195 aa24.29■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms