RNA–Protein interactions for RNA: ENST00000554811.5

XRCC3-208, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 2

Gene XRCC3, Length 3,668 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-208ENST00000554811 HSP90B1P14625 803 aaKnown RBP14.29□□□□□ -0.12
XRCC3-208ENST00000554811 USP44Q9H0E7 712 aa14.29□□□□□ -0.12
XRCC3-208ENST00000554811 BOLA2Q9H3K6 86 aa14.29□□□□□ -0.12
XRCC3-208ENST00000554811 NDUFB9Q9Y6M9 179 aa14.29□□□□□ -0.12
XRCC3-208ENST00000554811 TNRQ92752 1358 aa14.28□□□□□ -0.12
XRCC3-208ENST00000554811 NEO1Q92859 1461 aa14.28□□□□□ -0.12
XRCC3-208ENST00000554811 ZC3H6P61129 1189 aaKnown RBP14.28□□□□□ -0.12
XRCC3-208ENST00000554811 KIAA2012Q0VF49 1180 aa14.28□□□□□ -0.12
XRCC3-208ENST00000554811 GIMAP6Q6P9H5 292 aa14.28□□□□□ -0.12
XRCC3-208ENST00000554811 MBD3O95983 291 aa14.28□□□□□ -0.12
XRCC3-208ENST00000554811 UQCRHLA0A096LP55 91 aa14.27□□□□□ -0.12
XRCC3-208ENST00000554811 UQCRHP07919 91 aa14.27□□□□□ -0.12
XRCC3-208ENST00000554811 KCNA6P17658 529 aa14.27□□□□□ -0.12
XRCC3-208ENST00000554811 FSD1Q9BTV5 496 aa14.27□□□□□ -0.12
XRCC3-208ENST00000554811 A2ML1A8K2U0 1454 aa14.27□□□□□ -0.12
XRCC3-208ENST00000554811 MED14O60244 1454 aa14.27□□□□□ -0.12
XRCC3-208ENST00000554811 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.27□□□□□ -0.13
XRCC3-208ENST00000554811 TSC1Q92574 1164 aa14.27□□□□□ -0.13
XRCC3-208ENST00000554811 AK2P54819 239 aa14.27□□□□□ -0.13
XRCC3-208ENST00000554811 SLC39A6Q13433 755 aa14.27□□□□□ -0.13
XRCC3-208ENST00000554811 LRSAM1Q6UWE0 723 aa14.27□□□□□ -0.13
XRCC3-208ENST00000554811 DNAAF4Q8WXU2 420 aa14.27□□□□□ -0.13
XRCC3-208ENST00000554811 TTC12Q9H892 705 aaPredicted RBP14.27□□□□□ -0.13
XRCC3-208ENST00000554811 SOS1Q07889 1333 aaPredicted RBP14.27□□□□□ -0.13
XRCC3-208ENST00000554811 ATP10DQ9P241 1426 aa14.26□□□□□ -0.13
XRCC3-208ENST00000554811 ATP7BP35670 1465 aa14.26□□□□□ -0.13
XRCC3-208ENST00000554811 PRAMEF22A3QJZ6 481 aa14.26□□□□□ -0.13
XRCC3-208ENST00000554811 KDM4AO75164 1064 aa14.26□□□□□ -0.13
XRCC3-208ENST00000554811 HOXC9P31274 260 aa14.26□□□□□ -0.13
XRCC3-208ENST00000554811 RIC3Q7Z5B4 369 aa14.26□□□□□ -0.13
XRCC3-208ENST00000554811 DNAJC2Q99543 621 aaKnown RBP14.26□□□□□ -0.13
XRCC3-208ENST00000554811 TFIP11Q9UBB9 837 aaKnown RBP14.26□□□□□ -0.13
XRCC3-208ENST00000554811 MAP3K2Q9Y2U5 619 aa14.26□□□□□ -0.13
XRCC3-208ENST00000554811 PDE4CQ08493 712 aa14.26□□□□□ -0.13
XRCC3-208ENST00000554811 G3BP1Q13283 466 aaKnown RBP eCLIP14.26□□□□□ -0.13
XRCC3-208ENST00000554811 RASEFQ8IZ41 740 aa14.26□□□□□ -0.13
XRCC3-208ENST00000554811 WDR33Q9C0J8 1336 aaKnown RBP14.26□□□□□ -0.13
XRCC3-208ENST00000554811 FLT4P35916 1363 aa14.25□□□□□ -0.13
XRCC3-208ENST00000554811 CDK12Q9NYV4 1490 aaPredicted RBP14.25□□□□□ -0.13
XRCC3-208ENST00000554811 CFAP74Q9C0B2 1584 aa14.25□□□□□ -0.13
XRCC3-208ENST00000554811 KIF1BPQ96EK5 621 aa14.25□□□□□ -0.13
XRCC3-208ENST00000554811 GPATCH3Q96I76 525 aa14.25□□□□□ -0.13
XRCC3-208ENST00000554811 ARHGAP31Q2M1Z3 1444 aa14.25□□□□□ -0.13
XRCC3-208ENST00000554811 ZKSCAN1P17029 563 aaPredicted RBP14.25□□□□□ -0.13
XRCC3-208ENST00000554811 MCM2P49736 904 aa14.25□□□□□ -0.13
XRCC3-208ENST00000554811 PDRG1Q9NUG6 133 aa14.25□□□□□ -0.13
XRCC3-208ENST00000554811 NLRP2Q9NX02 1062 aa14.25□□□□□ -0.13
XRCC3-208ENST00000554811 DNM1Q05193 864 aaKnown RBP14.24□□□□□ -0.13
XRCC3-208ENST00000554811 DDX11Q96FC9 970 aa14.24□□□□□ -0.13
XRCC3-208ENST00000554811 NCOA3Q9Y6Q9 1424 aa14.24□□□□□ -0.13
XRCC3-208ENST00000554811 CKAP2LQ8IYA6 745 aa14.24□□□□□ -0.13
XRCC3-208ENST00000554811 EDC3Q96F86 508 aaKnown RBP14.24□□□□□ -0.13
XRCC3-208ENST00000554811 PHF14O94880 888 aa14.23□□□□□ -0.13
XRCC3-208ENST00000554811 LRRC2Q9BYS8 371 aa14.23□□□□□ -0.13
XRCC3-208ENST00000554811 AATKQ6ZMQ8 1374 aa14.23□□□□□ -0.13
XRCC3-208ENST00000554811 GJB2P29033 226 aa14.23□□□□□ -0.13
XRCC3-208ENST00000554811 CCDC39Q9UFE4 941 aa14.23□□□□□ -0.13
XRCC3-208ENST00000554811 NBPF6Q5VWK0 638 aa14.23□□□□□ -0.13
XRCC3-208ENST00000554811 NBPF4Q96M43 638 aa14.23□□□□□ -0.13
XRCC3-208ENST00000554811 CPSF1Q10570 1443 aaKnown RBP14.23□□□□□ -0.13
XRCC3-208ENST00000554811 PROSER3Q2NL68 480 aa14.22□□□□□ -0.13
XRCC3-208ENST00000554811 STX6O43752 255 aa14.22□□□□□ -0.13
XRCC3-208ENST00000554811 ZNF445P59923 1031 aa14.22□□□□□ -0.13
XRCC3-208ENST00000554811 RAB11FIP3O75154 756 aa14.22□□□□□ -0.13
XRCC3-208ENST00000554811 LARP1BQ659C4 914 aaKnown RBP14.22□□□□□ -0.13
XRCC3-208ENST00000554811 BICD2Q8TD16 824 aa14.22□□□□□ -0.13
XRCC3-208ENST00000554811 RUFY2Q8WXA3 655 aa14.22□□□□□ -0.13
XRCC3-208ENST00000554811 NEUROD6Q96NK8 337 aa14.22□□□□□ -0.13
XRCC3-208ENST00000554811 CCDC85AQ96PX6 553 aaPredicted RBP14.22□□□□□ -0.13
XRCC3-208ENST00000554811 SNX14Q9Y5W7 946 aa14.22□□□□□ -0.13
XRCC3-208ENST00000554811 CYP46A1Q9Y6A2 500 aa14.22□□□□□ -0.13
XRCC3-208ENST00000554811 LARGE1O95461 756 aa14.21□□□□□ -0.13
XRCC3-208ENST00000554811 SYT1P21579 422 aa14.21□□□□□ -0.13
XRCC3-208ENST00000554811 FAM227BQ96M60 508 aa14.21□□□□□ -0.13
XRCC3-208ENST00000554811 PRDM10Q9NQV6 1147 aa14.21□□□□□ -0.13
XRCC3-208ENST00000554811 TMEM131LA2VDJ0 1609 aa14.21□□□□□ -0.13
XRCC3-208ENST00000554811 PTH1RQ03431 593 aa14.21□□□□□ -0.13
XRCC3-208ENST00000554811 ZMYND15Q9H091 742 aa14.21□□□□□ -0.13
XRCC3-208ENST00000554811 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.21□□□□□ -0.13
XRCC3-208ENST00000554811 BRD1O95696 1058 aa14.21□□□□□ -0.14
XRCC3-208ENST00000554811 ADCK5Q3MIX3 580 aa14.21□□□□□ -0.14
XRCC3-208ENST00000554811 PHF8Q9UPP1 1060 aa14.21□□□□□ -0.14
XRCC3-208ENST00000554811 LIMCH1Q9UPQ0 1083 aa14.21□□□□□ -0.14
XRCC3-208ENST00000554811 USP32Q8NFA0 1604 aa14.21□□□□□ -0.14
XRCC3-208ENST00000554811 KIAA0232Q92628 1395 aa14.2□□□□□ -0.14
XRCC3-208ENST00000554811 ATP5J2-PTCD1G3V325 749 aa14.2□□□□□ -0.14
XRCC3-208ENST00000554811 PTCD1O75127 700 aaKnown RBP14.2□□□□□ -0.14
XRCC3-208ENST00000554811 ADCY5O95622 1261 aa14.2□□□□□ -0.14
XRCC3-208ENST00000554811 PREX1Q8TCU6 1659 aa14.2□□□□□ -0.14
XRCC3-208ENST00000554811 NEURL4Q96JN8 1562 aa14.2□□□□□ -0.14
XRCC3-208ENST00000554811 TMEM2Q9UHN6 1383 aa14.2□□□□□ -0.14
XRCC3-208ENST00000554811 PLEKHG3A1L390 1219 aa14.2□□□□□ -0.14
XRCC3-208ENST00000554811 MAP3K5Q99683 1374 aa14.19□□□□□ -0.14
XRCC3-208ENST00000554811 H3BQV1 296 aa14.19□□□□□ -0.14
XRCC3-208ENST00000554811 IFFO2Q5TF58 517 aa14.19□□□□□ -0.14
XRCC3-208ENST00000554811 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.19□□□□□ -0.14
XRCC3-208ENST00000554811 USP6P35125 1406 aa14.19□□□□□ -0.14
XRCC3-208ENST00000554811 TPM2P07951 284 aa14.19□□□□□ -0.14
XRCC3-208ENST00000554811 PPP1R9BQ96SB3 815 aa14.19□□□□□ -0.14
XRCC3-208ENST00000554811 RRP9O43818 475 aaKnown RBP14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms