RNA–Protein interactions for RNA: ENST00000554808.1

LINC01397-201, Transcript of long intergenic non-protein coding RNA 1397, humanhuman

TSL 4 BASIC

Gene LINC01397, Length 579 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01397-201ENST00000554808 STARD3NLO95772 234 aa10.42□□□□□ -0.74
LINC01397-201ENST00000554808 PTF1AQ7RTS3 328 aa10.42□□□□□ -0.74
LINC01397-201ENST00000554808 ZNF428Q96B54 188 aa10.42□□□□□ -0.74
LINC01397-201ENST00000554808 ZNF496Q96IT1 587 aaPredicted RBP10.42□□□□□ -0.74
LINC01397-201ENST00000554808 GIGYF1O75420 1035 aaPredicted RBP10.41□□□□□ -0.74
LINC01397-201ENST00000554808 SLFN5Q08AF3 891 aa10.41□□□□□ -0.74
LINC01397-201ENST00000554808 RC3H1Q5TC82 1133 aaKnown RBP10.41□□□□□ -0.74
LINC01397-201ENST00000554808 NBPF14Q5TI25 921 aa10.4□□□□□ -0.74
LINC01397-201ENST00000554808 TRMT2AQ8IZ69 625 aaKnown RBP10.4□□□□□ -0.74
LINC01397-201ENST00000554808 MIS18AQ9NYP9 233 aa10.4□□□□□ -0.74
LINC01397-201ENST00000554808 KCNQ3O43525 872 aa10.39□□□□□ -0.75
LINC01397-201ENST00000554808 NPM2Q86SE8 214 aaKnown RBP10.39□□□□□ -0.75
LINC01397-201ENST00000554808 FLAD1Q8NFF5 587 aa10.39□□□□□ -0.75
LINC01397-201ENST00000554808 TSR2Q969E8 191 aaKnown RBP10.39□□□□□ -0.75
LINC01397-201ENST00000554808 MYH3P11055 1940 aa10.39□□□□□ -0.75
LINC01397-201ENST00000554808 CYP19A1P11511 503 aaPredicted RBP10.38□□□□□ -0.75
LINC01397-201ENST00000554808 ADRA2BP18089 450 aa10.38□□□□□ -0.75
LINC01397-201ENST00000554808 CRKLP46109 303 aaKnown RBP10.38□□□□□ -0.75
LINC01397-201ENST00000554808 TWISTNBQ3B726 338 aaPredicted RBP10.38□□□□□ -0.75
LINC01397-201ENST00000554808 CCDC30Q5VVM6 783 aa10.38□□□□□ -0.75
LINC01397-201ENST00000554808 DUSP27Q5VZP5 1158 aa10.38□□□□□ -0.75
LINC01397-201ENST00000554808 PROM2Q8N271 834 aa10.38□□□□□ -0.75
LINC01397-201ENST00000554808 AK7Q96M32 723 aa10.38□□□□□ -0.75
LINC01397-201ENST00000554808 SLC4A9Q96Q91 983 aa10.38□□□□□ -0.75
LINC01397-201ENST00000554808 ANO8Q9HCE9 1232 aaPredicted RBP10.38□□□□□ -0.75
LINC01397-201ENST00000554808 LRRC4BQ9NT99 713 aa10.38□□□□□ -0.75
LINC01397-201ENST00000554808 CCDC87Q9NVE4 849 aa10.38□□□□□ -0.75
LINC01397-201ENST00000554808 STK32BQ9NY57 414 aa10.38□□□□□ -0.75
LINC01397-201ENST00000554808 GOLGB1Q14789 3259 aaKnown RBP10.38□□□□□ -0.75
LINC01397-201ENST00000554808 SENP3-EIF4A1A0A087X0R7 540 aa10.37□□□□□ -0.75
LINC01397-201ENST00000554808 YY1P25490 414 aa10.37□□□□□ -0.75
LINC01397-201ENST00000554808 SSFA2P28290 1259 aa10.37□□□□□ -0.75
LINC01397-201ENST00000554808 IL6STP40189 918 aaPredicted RBP10.37□□□□□ -0.75
LINC01397-201ENST00000554808 ITPK1Q13572 414 aa10.37□□□□□ -0.75
LINC01397-201ENST00000554808 HDGFL1Q5TGJ6 251 aa10.37□□□□□ -0.75
LINC01397-201ENST00000554808 DNAJC10Q8IXB1 793 aa10.37□□□□□ -0.75
LINC01397-201ENST00000554808 LINC00116Q8NCU8 138 aa10.37□□□□□ -0.75
LINC01397-201ENST00000554808 STK31Q9BXU1 1019 aa10.37□□□□□ -0.75
LINC01397-201ENST00000554808 DBF4Q9UBU7 674 aaPredicted RBP10.37□□□□□ -0.75
LINC01397-201ENST00000554808 RTCBQ9Y3I0 505 aaKnown RBP10.37□□□□□ -0.75
LINC01397-201ENST00000554808 A0A087WZG4 1122 aa10.36□□□□□ -0.75
LINC01397-201ENST00000554808 RPS6KA4O75676 772 aa10.36□□□□□ -0.75
LINC01397-201ENST00000554808 EXOSC9Q06265 439 aaKnown RBP10.36□□□□□ -0.75
LINC01397-201ENST00000554808 SLC15A2Q16348 729 aa10.36□□□□□ -0.75
LINC01397-201ENST00000554808 SPINK5Q9NQ38 1064 aaPredicted RBP10.36□□□□□ -0.75
LINC01397-201ENST00000554808 USP16Q9Y5T5 823 aa10.36□□□□□ -0.75
LINC01397-201ENST00000554808 COL15A1P39059 1388 aa10.36□□□□□ -0.75
LINC01397-201ENST00000554808 LAMB2P55268 1798 aa10.35□□□□□ -0.75
LINC01397-201ENST00000554808 RGL2O15211 777 aa10.35□□□□□ -0.75
LINC01397-201ENST00000554808 GNPATO15228 680 aa10.35□□□□□ -0.75
LINC01397-201ENST00000554808 ALDH1L2Q3SY69 923 aa10.35□□□□□ -0.75
LINC01397-201ENST00000554808 C8orf58Q8NAV2 365 aa10.35□□□□□ -0.75
LINC01397-201ENST00000554808 AKT1S1Q96B36 256 aa10.35□□□□□ -0.75
LINC01397-201ENST00000554808 CDCA7LQ96GN5 454 aa10.35□□□□□ -0.75
LINC01397-201ENST00000554808 DDX21Q9NR30 783 aaKnown RBP eCLIP10.35□□□□□ -0.75
LINC01397-201ENST00000554808 HYPKQ9NX55 129 aa10.35□□□□□ -0.75
LINC01397-201ENST00000554808 TFCP2L1Q9NZI6 479 aa10.35□□□□□ -0.75
LINC01397-201ENST00000554808 EIF2S2P20042 333 aaKnown RBP10.34□□□□□ -0.75
LINC01397-201ENST00000554808 YTHDC1Q96MU7 727 aaKnown RBP10.34□□□□□ -0.75
LINC01397-201ENST00000554808 SPON1Q9HCB6 807 aa10.34□□□□□ -0.75
LINC01397-201ENST00000554808 ZBTB1Q9Y2K1 713 aa10.34□□□□□ -0.75
LINC01397-201ENST00000554808 NRXN2Q9P2S2 1712 aa10.33□□□□□ -0.76
LINC01397-201ENST00000554808 KIF13BQ9NQT8 1826 aa10.33□□□□□ -0.76
LINC01397-201ENST00000554808 PRAMEF22A3QJZ6 481 aa10.33□□□□□ -0.76
LINC01397-201ENST00000554808 VAMP4O75379 141 aa10.33□□□□□ -0.76
LINC01397-201ENST00000554808 EIF5P55010 431 aaKnown RBP10.33□□□□□ -0.76
LINC01397-201ENST00000554808 KRT24Q2M2I5 525 aa10.33□□□□□ -0.76
LINC01397-201ENST00000554808 INTS5Q6P9B9 1019 aaKnown RBP10.33□□□□□ -0.76
LINC01397-201ENST00000554808 TSPYL6Q8N831 410 aa10.33□□□□□ -0.76
LINC01397-201ENST00000554808 SLC16A10Q8TF71 515 aa10.33□□□□□ -0.76
LINC01397-201ENST00000554808 PDGFDQ9GZP0 370 aaPredicted RBP10.33□□□□□ -0.76
LINC01397-201ENST00000554808 ELL2O00472 640 aaPredicted RBP10.32□□□□□ -0.76
LINC01397-201ENST00000554808 DDX58O95786 925 aaKnown RBP10.32□□□□□ -0.76
LINC01397-201ENST00000554808 CANXP27824 592 aaKnown RBP10.32□□□□□ -0.76
LINC01397-201ENST00000554808 KCNQ4P56696 695 aa10.32□□□□□ -0.76
LINC01397-201ENST00000554808 ZNF827Q17R98 1081 aa10.32□□□□□ -0.76
LINC01397-201ENST00000554808 TRAPPC3LQ5T215 181 aa10.32□□□□□ -0.76
LINC01397-201ENST00000554808 PPP1R1BQ9UD71 204 aaPredicted RBP10.32□□□□□ -0.76
LINC01397-201ENST00000554808 KIF16BQ96L93 1317 aa10.32□□□□□ -0.76
LINC01397-201ENST00000554808 PXDNLA1KZ92 1463 aa10.31□□□□□ -0.76
LINC01397-201ENST00000554808 ZPR1O75312 459 aa10.31□□□□□ -0.76
LINC01397-201ENST00000554808 A1BGP04217 495 aa10.31□□□□□ -0.76
LINC01397-201ENST00000554808 RFC4P35249 363 aa10.31□□□□□ -0.76
LINC01397-201ENST00000554808 BRPF1P55201 1214 aaPredicted RBP10.31□□□□□ -0.76
LINC01397-201ENST00000554808 KIF6Q6ZMV9 814 aa10.31□□□□□ -0.76
LINC01397-201ENST00000554808 CHPF2Q9P2E5 772 aa10.31□□□□□ -0.76
LINC01397-201ENST00000554808 ZNF652Q9Y2D9 606 aa10.31□□□□□ -0.76
LINC01397-201ENST00000554808 PNPLA7Q6ZV29 1317 aa10.31□□□□□ -0.76
LINC01397-201ENST00000554808 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.3□□□□□ -0.76
LINC01397-201ENST00000554808 ERVV-1B6SEH8 477 aa10.3□□□□□ -0.76
LINC01397-201ENST00000554808 MYL6BP14649 208 aa10.3□□□□□ -0.76
LINC01397-201ENST00000554808 PDIA6Q15084 440 aa10.3□□□□□ -0.76
LINC01397-201ENST00000554808 CLEC4GQ6UXB4 293 aa10.3□□□□□ -0.76
LINC01397-201ENST00000554808 NARFQ9UHQ1 456 aa10.3□□□□□ -0.76
LINC01397-201ENST00000554808 PTPRCP08575 1304 aa10.3□□□□□ -0.76
LINC01397-201ENST00000554808 DLEC1Q9Y238 1755 aa10.29□□□□□ -0.76
LINC01397-201ENST00000554808 NBPF26B4DH59 902 aa10.29□□□□□ -0.76
LINC01397-201ENST00000554808 SLC4A2P04920 1241 aa10.29□□□□□ -0.76
LINC01397-201ENST00000554808 PTGER2P43116 358 aa10.29□□□□□ -0.76
LINC01397-201ENST00000554808 HSP90AB3PQ58FF7 597 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms